Search results for "techniques"

showing 10 items of 4426 documents

Toxicity of mycotoxins in vivo on vertebrate organisms: A review.

2019

Mycotoxins are considered to be a major risk factor affecting human and animal health as they are one of the most dangerous contaminants of food and feed. This review aims to compile the research developed up to date on the toxicological effects that mycotoxins can induce on human health, through the examination of a selected number of studies in vivo. AFB1 shows to be currently the most studied mycotoxin in vivo, followed by DON, ZEA and OTA. Scarce data was found for FBs, PAT, CIT, AOH and Fusarium emerging mycotoxins. The majority of them concerned the investigation of immunotoxicity, whereas the rest consisted in the study of genotoxicity, oxidative stress, hepatotoxicity, cytotoxicity,…

FusariumMicroarrayPharmacologyToxicologymedicine.disease_causeChemistry Techniques AnalyticalTranscriptome03 medical and health scienceschemistry.chemical_compound0404 agricultural biotechnologyIn vivomedicineAnimalsHumansMycotoxin030304 developmental biology0303 health sciencesbiologyNeurotoxicityfood and beverages04 agricultural and veterinary sciencesGeneral MedicineMycotoxinsbiology.organism_classificationmedicine.disease040401 food sciencechemistryToxicityGenotoxicityFood ScienceFood and chemical toxicology : an international journal published for the British Industrial Biological Research Association
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Ciclohexadespipeptide beauvericin degradation by different strains of Saccharomyces cerevisiae

2013

Abstract The interaction between the mycotoxin beauvericin (BEA) and 9 yeast strains of Saccharomyces cerevisiae named LO9, YE-2, YE5, YE-6, YE-4, A34, A17, A42 and A08 was studied. The biological degradations were carried out under aerobic conditions in the liquid medium of Potato Dextrose Broth (PDB) at 25 °C for 48 h and in a food/feed system composed of corn flour at 37 °C for 3 days, respectively. BEA present in fermented medium and corn flour was determined using liquid chromatography coupled to the mass spectrometry detector in tandem (LC–MS/MS) and the BEA degradation products produced during the fermentations were determined using the technique of the liquid chromatography coupled …

FusariumSpectrometry Mass Electrospray IonizationFood HandlingSaccharomyces cerevisiaeFood ContaminationLiquid mediumSaccharomyces cerevisiaeToxicologyZea mayschemistry.chemical_compoundSpecies SpecificityTandem Mass SpectrometryDepsipeptidesMycotoxinBiotransformationChromatography High Pressure LiquidSolanum tuberosumMycotoxinChromatographybiologyMolecular StructureHydrolysisProbioticsbeauvericinfood and beveragesStarchGeneral MedicineElectrochemical TechniquesMycotoxinsbiology.organism_classificationYeastBeauvericinPlant TuberschemistryFermentationSeedsDegradation (geology)FermentationFood Science
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Antibacterial activity of the enniatin B, produced by Fusarium tricinctum in liquid culture, and cytotoxic effects on Caco-2 cells.

2011

The enniatins (ENs) are bioactive compounds of hexadepsipeptidic structure produced by several strains of Fusarium sp. The EN B was purified from extracts of Fusarium tricinctum growth on liquid culture of potato dextrose broth (PDB), using a semipreparative liquid chromatography (LC) followed by an analytical LC. The purity and the structure of the isolated compound were confirmed by the determination of the extinction coefficient and with electrospray ionization-mass spectrometry (ESI-MS) study. The pure fraction of EN B was utilized to determine the antibiotic effects on several bacterial strains that are considered normally pathogens of the intestinal tract: Escherichia coli, Enterococc…

FusariumSpectrometry Mass Electrospray IonizationShigella dysenteriaeCell SurvivalHealth Toxicology and MutagenesisCell Culture TechniquesMicrobial Sensitivity TestsToxicologymedicine.disease_causeMicrobiologyListeria monocytogenesFusariumDepsipeptidesmedicineHumansYersinia enterocoliticaEscherichia colibiologyDose-Response Relationship DrugCell DifferentiationClostridium perfringensbiology.organism_classificationLipidsAnti-Bacterial AgentsCulture MediaSalmonella entericaCaco-2 CellsEnterococcus faeciumToxicology mechanisms and methods
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Characterization of Fusarium spp. isolates by PCR-RFLP analysis of the intergenic spacer region of the rRNA gene (rDNA)

2004

In the present study, 44 Fusarium spp. isolates (5 Fusarium culmorum, 7 Fusarium graminearum, 1 Fusarium cerealis, 1 Fusarium poae, 26 Fusarium oxysporum, and 4 Gibberella fujikuroi species complex) were characterized morphologically, physiologically and genetically. All except one (Dutch Collection: CBS 620.72) were isolated from different hosts grown in various Spanish localizations. Morphological characterization was made according to macroscopic and microscopic aspects. Physiological characterization was based on their ability to produce zearalenone (ZEA) and type B trichothecenes (deoxynivalenol, nivalenol and 3-acetyldeoxynivalenol). ZEA was determined by liquid chromatography and tri…

FusariumTrichotheceneFood ContaminationBiologyPolymerase Chain ReactionMicrobiologyGas Chromatography-Mass SpectrometryMicrobiologychemistry.chemical_compoundFusariumSpecies SpecificityVomitoxinDNA Ribosomal SpacerFusarium oxysporumFusarium culmorumCluster AnalysisDNA FungalMycological Typing TechniquesZearalenonePhylogenyfood and beveragesRNA FungalDNA Restriction EnzymesGeneral Medicinebiology.organism_classificationDNA FingerprintingchemistryRNA RibosomalZearalenoneGibberella fujikuroiRestriction fragment length polymorphismEdible GrainTrichothecenesPolymorphism Restriction Fragment LengthFood ScienceInternational Journal of Food Microbiology
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Polish is quantitatively different on quartzite flakes used on different worked materials.

2020

Metrology has been successfully used in the last decade to quantify use-wear on stone tools. Such techniques have been mostly applied to fine-grained rocks (chert), while studies on coarse-grained raw materials have been relatively infrequent. In this study, confocal microscopy was employed to investigate polished surfaces on a coarse-grained lithology, quartzite. Wear originating from contact with five different worked materials were classified in a data-driven approach using machine learning. Two different classifiers, a decision tree and a support-vector machine, were used to assign the different textures to a worked material based on a selected number of parameters (Mean density of furr…

Future studiesConfocal MicroscopyDecision AnalysisLithologyRaw MaterialsAntlersBone imagingPlant Science01 natural sciencesDiagnostic RadiologyMedicine and Health Sciences0601 history and archaeologyElectron MicroscopyAnimal AnatomyMaterialsMicroscopyMultidisciplinary060102 archaeologyPlant AnatomyRadiology and ImagingQRLight Microscopy06 humanities and the artsQuartzWoodBone ImagingProcess EngineeringPhysical SciencesMedicineEngineering and TechnologyScanning Electron MicroscopyAnatomyManagement EngineeringGeologyResearch Article010506 paleontologyImaging TechniquesScienceMaterials ScienceMineralogyIndustrial ProcessesResearch and Analysis MethodsDiagnostic MedicineIndustrial Engineering0105 earth and related environmental sciencesSurface TreatmentsDecision TreesBiology and Life SciencesManufacturing ProcessesSample size determinationZoologyPloS one
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Paradigm of tunable clustering using Binarization of Consensus Partition Matrices (Bi-CoPaM) for gene discovery

2013

Copyright @ 2013 Abu-Jamous et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Clustering analysis has a growing role in the study of co-expressed genes for gene discovery. Conventional binary and fuzzy clustering do not embrace the biological reality that some genes may be irrelevant for a problem and not be assigned to a cluster, while other genes may participate in several biological functions and should simultaneously belong to multiple clusters. Also, these algorithms cannot generate tight cluster…

Fuzzy clusteringMicroarraysSingle-linkage clusteringGenes FungalGene Expressionlcsh:MedicineBiologyFuzzy logicSet (abstract data type)Molecular GeneticsEngineeringGenome Analysis ToolsYeastsConsensus clusteringMolecular Cell BiologyDatabases GeneticCluster (physics)GeneticsCluster AnalysisBinarization of Consensus Partition Matrices (Bi-CoPaM)Cluster analysislcsh:ScienceGene clusteringBiologyOligonucleotide Array Sequence AnalysisGeneticsMultidisciplinarybusiness.industryCell Cycleta111lcsh:RComputational BiologyPattern recognitionGenomicsgene discoveryPartition (database)tunable binarization techniquesComputingMethodologies_PATTERNRECOGNITIONGenesCell cyclesSignal Processinglcsh:QArtificial intelligencebusinessGenomic Signal ProcessingAlgorithmsResearch Articleclustering
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GABA transporters control GABAergic neurotransmission in the mouse subplate.

2015

The subplate is a transient layer between the cortical plate and intermediate zone in the developing cortex. Thalamo-cortical axons form temporary synapses on subplate neurons (SPns) before invading the cortical plate. Neuronal activity within the subplate is of critical importance for the development of neocortical circuits and architecture. Although both glutamatergic and GABAergic inputs on SPns were reported, short-term plasticity of GABAergic transmission has not been investigated yet. GABAergic postsynaptic currents (GPSCs) were recorded from SPns in coronal neocortical slices prepared from postnatal day 3-4 mice using whole-cell patch-clamp technique. Evoked GPSCs (eGPSCs) elicited b…

GABA Plasma Membrane Transport ProteinsGABA Plasma Membrane Transport ProteinsPatch-Clamp TechniquesGABAB receptorBiologyNeurotransmissionSynaptic Transmissiongamma-Aminobutyric acidTissue Culture TechniquesGlutamatergicSubplatemedicinePremovement neuronal activityAnimalsgamma-Aminobutyric AcidGeneral NeuroscienceSomatosensory CortexSynaptic PotentialsReceptors GABA-AElectric StimulationMice Inbred C57BLmedicine.anatomical_structureReceptors GABA-BGABAergicNeurosciencemedicine.drugCentral Nervous System AgentsNeuroscience
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Functional evidence for GABA as modulator of the contractility of the longitudinal muscle in mouse duodenum: Role of GABAA and GABAC receptors

2007

We investigated, in vitro, the effects of gamma-aminobutyric acid (GABA) on the spontaneous mechanical activity of the longitudinal smooth muscle in mouse duodenum. GABA induced an excitatory effect, consisting in an increase in the basal tone, which was antagonized by the GABA(A)-receptor antagonist, bicuculline, potentiated by (1,2,5,6-Tetrahydropyridin-4-yl)methylphosphinic acid hydrate (TPMPA), a GABA(C)-receptor antagonist and it was not affected by phaclofen, a GABA(B)-receptor antagonist. Muscimol, GABA(A) receptor agonist, induced a contractile effect markedly reduced by bicuculline, tetrodotoxin (TTX), hexamethonium and atropine. Cis-4-aminocrotonic acid (CACA), a specific GABA(C) …

GABA receptorsAgonistmedicine.medical_specialtyDuodenumPyridinesmedicine.drug_classIn Vitro TechniquesBicucullineInhibitory postsynaptic potentialSettore BIO/09 - FisiologiaGABAA-rho receptorGABA AntagonistsMiceGABACellular and Molecular Neurosciencechemistry.chemical_compoundPhaclofenReceptors GABAInternal medicineIntestinal motilitymedicineAnimalsDrug InteractionsGABA Agonistsgamma-Aminobutyric AcidPharmacologyDose-Response Relationship DrugMuscimolGABAA receptorCytarabineMuscle SmoothBicucullinePhosphinic AcidsMice Inbred C57BLEndocrinologyReceptors GABA-Bnervous systemchemistryMuscimolCholinergic excitatory nerveNANC inhibitory nerveHexamethoniumMouse duodenumMuscle Contractionmedicine.drugNeuropharmacology
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Glutathione metabolism under the influence of hydroperoxides in the lactating mammary gland of the rat. Effect of glucose and extracellular ATP.

1987

Tert-butyl hydroperoxide decreases GSH and total free glutathione (GSH+2GSSG) contents of acini from lactating mammary glands. The decrease in total free glutathione can be explained by an increase in mixed disulfide formation and by excretion of GSS G to the extracellular medium, and subsequent degradation catalyzed by gamma-glutamyl transpeptidase. Low concentrations of glucose prevented the changes in glutathione levels induced by the peroxide. In the presence of extracellular ATP, glucose did not prevent these changes. However, incubations with the peroxide, did not alter the rate of other metabolic pathways by acini.

GPX1medicine.medical_specialtyGPX3Glutathione reductaseBiophysicsBiologyIn Vitro TechniquesBiochemistryPeroxideExcretionchemistry.chemical_compoundAdenosine TriphosphateMammary Glands Animaltert-ButylhydroperoxidePregnancyInternal medicinemedicineExtracellularAnimalsLactationMolecular BiologyRats Inbred StrainsCell BiologyGlutathioneGlutathionePeroxidesRatsMetabolic pathwayEndocrinologyGlucosechemistryBiochemistryFemaleBioscience reports
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GADD45a physically and functionally interacts with TET1

2015

AbstractDNA demethylation plays a central role during development and in adult physiology. Different mechanisms of active DNA demethylation have been established. For example, Growth Arrest and DNA Damage 45-(GADD45) and Ten-Eleven-Translocation (TET) proteins act in active DNA demethylation but their functional relationship is unresolved. Here we show that GADD45a physically interacts – and functionally cooperates with TET1 in methylcytosine (mC) processing. In reporter demethylation GADD45a requires endogenous TET1 and conversely TET1 requires GADD45a. On GADD45a target genes TET1 hyperinduces 5-hydroxymethylcytosine (hmC) in the presence of GADD45a, while 5-formyl-(fC) and 5-carboxylcyto…

Gadd45Cancer ResearchDNA damageCell Cycle ProteinsBiologyDNA-binding proteinArticleMixed Function OxygenaseshmCchemistry.chemical_compoundCytosineLC–MS/MSProto-Oncogene ProteinsHumansImmunoprecipitationMolecular BiologyDemethylationGadd45Nuclear ProteinsOxidative DNA demethylationCell BiologyDNA MethylationDNA-Binding Proteins5-MethylcytosineDNA demethylationHEK293 CellschemistryBiochemistryGene Knockdown TechniquesDNA methylationDNA demethylation5-MethylcytosineOxidation-ReductionTETProtein BindingDevelopmental BiologyDifferentiation
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