Search results for "thaliana"

showing 10 items of 136 documents

Structural and evolutionary analysis of the copia-like elements in the Arabidopsis thaliana genome.

2001

The analysis of 460 kb of genomic sequence of Arabidopsis thaliana chromosome III allowed us to identify two new transposable elements named AtC1 and AtC2. AtC1 shows identical long terminal repeats (LTRs) and all the structural features characteristic of the copia-like active elements. AtC2 is also a full copia-like element, but a putative stop codon in the open reading frame (ORF) would produce a truncated protein. In order to identify the copia-like fraction of the A. thaliana genome, a careful computer-based analysis of the available sequences (which correspond to 92% of the genome) was performed. Approximately 300 nonredundant copia-like sequences homologous to AtC1 and AtC2 were detec…

Transposable elementDatabases FactualArabidopsisSequence HomologyRetrotransposonBiologyGenomeEvolution MolecularMagnoliopsidaOpen Reading FramesGeneticsArabidopsis thalianaAmino Acid SequenceMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenyExpressed Sequence TagsPhylogenetic treeModels GeneticfungiTerminal Repeat SequencesSequence Analysis DNAModels Theoreticalbiology.organism_classificationStop codonLong terminal repeatOpen reading frameGenesEvolutionary biologyDNA Transposable ElementsSequence AlignmentGenome PlantSoftwareMolecular biology and evolution
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Are the xyloglucans new elicitors of plant immunity ?

2017

Damaged-Associated Molecular Patterns (DAMPs) are endogenous molecules released from the plant cell wall after wounding by pathogens. DAMPs are recognized by Pattern- Recognition Receptors (PRRs) that play a key role in plant immunity by mediating defense responses. The plant cell wall-derived oligogalacturonides (OG) are well characterized DAMPs that elicit plant immune responses such as MAPK activation, [Ca2+]cyt variations, H2O2 production, defense-related gene expression and enhanced resistance against Botrytis cinerea. Our study focused on a new polysaccharide component of the plant cell wall called xyloglucans (Xh) and compared the immune events triggered by OG and Xh in Arabidopsis t…

[SDE] Environmental SciencesDAMPs[SDV]Life Sciences [q-bio]fungifood and beveragesxyloglucansimmunity[SDV] Life Sciences [q-bio]A. thaliana[SDE]Environmental Sciencesoligogalacturonides[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BV] Life Sciences [q-bio]/Vegetal Biologysignaling
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Characterization and role of nitric oxide production in Arabidopsis thaliana defense responses induced by oligogalacturonides

2011

Nitric oxide (NO) regulates a wide range of plant processes from development toenvironmental adaptation. In this study, NO production and its effects were investigated in aplant-pathogen context. The production of NO following Arabidopsis treatment witholigogalacturonides (OGs), an endogenous elicitor of plant defense, was assessed using the NOsensitive probe 4, 5-diamino fluorescein diacetate. Pharmacological and genetic approaches wereused to analyze NO enzymatic sources and its role in the Arabidopsis thaliana /Botrytis cinereainteraction. We showed that NO production involves both a L-arginine- and a nitrate reductase(NR)-pathways. OGs-induced NO production was Ca2+-dependent and modula…

[SDV.SA] Life Sciences [q-bio]/Agricultural sciencesArabidopsis thalianaMonoxyde d’azoteNitrate réductaseArabidopsisNitric oxideOligogalacturonidesBotrytis cinereaPlant defenseRéactions de défenses des plantesCalcium[SDV.BV] Life Sciences [q-bio]/Vegetal BiologyTranscriptomeReactive oxygen speciesFormes activées de l’oxygèneNitrate reductase
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Des canaux Ioniques de la membrane plasmique lors de la mort cellulaire programmée induite par l’ozone chez A. thaliana

2011

Tropospheric ozone is a major secondary pollutant. In addition to its role in greenhouse effect gas, ozone is one of the most toxic air pollutants, and its pollution affects both human health and crop productivity. The work presented in this thesis concerns the role of ion channels in the plasma membrane in response to acute exposure to ozone and their interactions with signaling events leading to O3-induced PCD in A. Thaliana cultured cells. We have shown that cell death was genetically controlled and characterized by cell shrinkage similar to the mechanism of "Apoptosis Volume Decrease" (AVD) described in animal. This process is initially promoted by an early activation of a plasma membra…

[SDV.SA]Life Sciences [q-bio]/Agricultural sciences[SDV.SA] Life Sciences [q-bio]/Agricultural sciencesCanaux ioniquesOzoneArabidopsis thalianaSignalisation cellulaireIon channelsCalciumROSMort cellulaire programméeProgrammed cell deathCell signalling
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Calcium signaling in plant defense: involvement of subcellular compartments and glutamate receptorsCalcium signaling in plant defense: involvement of…

2012

[SDV] Life Sciences [q-bio][SDE] Environmental SciencesCalcium signaling Cryptogein oligogalacturonides mitochondria chloroplasts glutamate receptors Hyaloperonospora arabidopsidis Arabidopsis thaliana Nicotiana tabacumthese
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Etude du système de perception des chito--oligosaccharides chez la vigne et rôle dans l'immunité.

2014

Rapport de stage Master II R SPE IPM; Master

[SDV] Life Sciences [q-bio][SDE] Environmental SciencesVvCERKArabidopsis thalianaPRR[SDV]Life Sciences [q-bio]Vitis vinifera[SDE]Environmental Scienceschito-oligosaccharides
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Establishment of tools for investigating pyoverdine impact on iron homeostasis and plant defense responses

2013

Iron, the fourth major element in the Earth crust, is essential for growth and development of living organisms. However, due to its low solubility in the soil, it is weakly available for plants and micro-organisms. To efficiently assimilate iron, living organisms have evolved specific strategies. In plants such as Arabidopsis thaliana three trans-membrane proteins are involved in iron assimilation while in bacteria such as Pseudomonas fluorescens iron is taken up from the soil thanks to molecules displaying high affinity for iron called siderophores. It has been recently shown that pyoverdine, the major siderophore of the beneficial bacterium Pseudomonas fluorescens, is assimilated by A. th…

[SDV] Life Sciences [q-bio][SDE] Environmental Sciencesplace defencePseudomonas FluorescensArabidopsis thalianaplant defencepyoverdineIron[SDV]Life Sciences [q-bio][SDE]Environmental Sciencesfood and beverages[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BV] Life Sciences [q-bio]/Vegetal Biology
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Characterization of the role of flagellin in the innate immunity triggered by the endophytic pgpr burkholderia phytofirmans in arabidopsis and grapev…

2014

International audience

[SDV] Life Sciences [q-bio][SDE] Environmental Sciencesplant microbe interactionArabidopsis thalianaVitis viniferaPlant Growth Rhizobacteria (PGPR)[SDV]Life Sciences [q-bio][SDE]Environmental Sciences[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BV] Life Sciences [q-bio]/Vegetal BiologyComputingMilieux_MISCELLANEOUS
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Analysis of the cross‐regulation between immunity, growth and iron homeostasis in plants

2019

The existence of a tightly regulated balance between growth and immunity in plants has recently emerged. In this study, we challenged this concept thanks to the biological model pyoverdine-Arabidopsis thaliana. Pyoverdine is a siderophore produced by the plant growth promoting rhizobacteria Pseudomonas fluorescens C7R12. Under iron deficiency, P. fluorescens excretes the iron free form of pyoverdine (apo‐pyo) in the soil. Once chelated with iron (ferri‐pyo), the complex is internalized by the bacteria. We demonstrated that Arabidopsis thaliana plants treated by apo‐pyo in a medium containing or not iron internalize pyoverdine. Interestingly, apo‐pyo-treated plants did not show a typical gro…

[SDV] Life Sciences [q-bio][SDE] Environmental Sciencespyoverdine[SDV]Life Sciences [q-bio]fungiarabidopsis thaliana[SDE]Environmental Sciencesfood and beverages[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BV] Life Sciences [q-bio]/Vegetal Biologyiron homeostasisplant immunitypseudomonas fluorescens
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The plant resistance inducer β-aminobutyric acid (BABA) induces an iron deficiency response in A. thaliana

2012

β-aminobutyric acid (BABA) is a well-known plant resistance inducer. However, the molecular mechanisms underlying its effects are poorly understood. In the present study, we investigated whether BABA could act through the modification of iron homeostasis in Arabidopsis thaliana. Supporting this assumption, we obtained first evidences that BABA chelates iron with high affinity. We showed that pre-treatment of plants with BABA induced a drastic but transient iron deficiency response. Quantification of iron indicated that this response is related to the perturbation of iron distribution/availability rather than a reduction of iron assimilation. Finally, we provided evidence that the iron defic…

[SDV] Life Sciences [q-bio][SDE] Environmental Sciencesresistanceiron deficiency[SDV]Life Sciences [q-bio]arabidopsis thaliana[SDE]Environmental Sciences[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BV] Life Sciences [q-bio]/Vegetal Biologybeta-aminobutyric acidbotrytis cinerea
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