Search results for "throughput"

showing 10 items of 483 documents

The impact of grain size on the efficiency of embedded SIMD image processing architectures

2004

Pixel-per-processing element (PPE) ratio-the amount of image data directly mapped to each processing element-has a significant impact on the area and energy efficiency of embedded SIMD architectures for image processing applications. This paper quantitatively evaluates the impact of PPE ratio on system performance and efficiency for focal-plane SIMD image processing architectures by comparing throughput, area efficiency, and energy efficiency for a range of common application kernels using architectural and workload simulation. While the impact of grain size is affected by the mix of executed instructions within an application program, the most efficient PPE ratio often does not occur at PE…

PixelComputer Networks and CommunicationsComputer scienceProcessor grain sizeImage processingParallel computingEnergy technologyenergy and area efficiencyGrain sizeSIMDTheoretical Computer Scienceimage processingParallel processing (DSP implementation)technology modelingArtificial IntelligenceHardware and ArchitectureRetargetingSIMDThroughput (business)SoftwareEfficient energy use
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Next generation diagnostic algorithm in non-small cell lung cancer predictive molecular pathology: The KWAY Italian multicenter cost evaluation study

2022

Abstract Aims The KWAY project aims to investigate the economic sustainability of the up-front NGS technologies adoption in the analysis of clinically relevant molecular alterations in NSCLC patients. Methods The diagnostic workflow and the related sustained costs of five Italian referral centers were assessed in four different evolving scenarios were analyzed. For each scenario, two alternative testing strategies were evaluated: the Maximized Standard strategy and the Maximized NGS strategy. Results For each center, the robustness of obtained results was verified through a deterministic sensitivity analysis, observing the variation of total costs based on a variation of ±20 % of the input …

Predictive molecular pathologyLung NeoplasmsTotal costCostCost; NGS; NSCLC; Predictive molecular pathology; Single-gene test; Algorithms; High-Throughput Nucleotide Sequencing; Humans; Italy; Multicenter Studies as Topic; Carcinoma Non-Small-Cell Lung; Lung NeoplasmsNSCLCRobustness (computer science)Carcinoma Non-Small-Cell LungCost evaluationMedicineHumansMulticenter Studies as TopicNon-Small-Cell LungMolecular pathologybusiness.industryCarcinomaHigh-Throughput Nucleotide SequencingHematologyReliability engineeringWorkflowOncologyEconomic sustainabilityItalyNGSSingle-gene testNon small cellbusinessAlgorithms
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A Low-level Simulation Study of Prioritization in IEEE 802.11e Contention-based Networks

2006

This work deals with the performance evaluation of the IEEE 802.11e EDCA proposal for service prioritization in Wireless LANs. A large amount of study has been carried out in the scientific community to evaluate the performance of the EDCA proposal, mainly in terms of throughput and access delay differentiation. However, we argue that further performance insights are needed in order to fully understand the principles behind the EDCA prioritization mechanisms. To this purpose, rather than limit our investigation on throughput and delay performance figures, we take a closer look to their operation also in terms of low-level performance metrics (such as probability of accessing specific channe…

PrioritizationIEEE 802Service (systems architecture)Computer sciencebusiness.industryComputerSystemsOrganization_COMPUTER-COMMUNICATIONNETWORKSThroughputlaw.inventionlawLimit (music)Wireless lanWi-FibusinessCommunication channelComputer network
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Understanding 802.11e contention-based prioritization mechanisms and their coexistence with legacy 802.11 stations

2005

The IEEE 802.11e task group has reached a stable consensus on two basic contention-based priority mechanisms to promote for standardization: usage of different arbitration interframe spaces and usage of different minimum/maximum contention windows. The goal of this article is to provide a thorough understanding of the principles behind their operation. To this purpose, rather than limit our investigation to high-level (e.g. throughput and delay) performance figures, we take a closer look at their detailed operation, also in terms of low-level performance metrics (e.g., the probability of accessing specific channel slots). Our investigation on one hand confirms that AIFS differentiation prov…

PrioritizationStandardsStandardizationComputer Networks and CommunicationsComputer sciencePerformanceThroughputCommunication channels (information theory)Quality of serviceLimit (music)Service differentiationNetwork protocolsSettore ING-INF/03 - Telecomunicazionibusiness.industryInter frameIEEE 802.11eTelecommunication trafficProbability distributionsNetwork protocols; Performance; Probability distributions; Quality of service; Standards; Telecommunication traffic; Enhanced distributed channel access; IEEE 802.11e; Service differentiation; Communication channels (information theory)Hardware and ArchitectureArbitrationEnhanced distributed channel accessIEEE 802.11e-2005businessSoftwareInformation SystemsCommunication channelComputer network
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Germline correction of an epimutation related to Silver-Russell syndrome.

2015

Like genetic mutations, DNA methylation anomalies or epimutations can disrupt gene expression and lead to human diseases. However, unlike genetic mutations, epimutations can in theory be reverted through developmental epigenetic reprograming, which should limit their transmission across generations. Following the request for a parental project of a patient diagnosed with Silver-Russell syndrome (SRS), and the availability of both somatic and spermatozoa DNA from the proband and his father, we had the exceptional opportunity to evaluate the question of inheritance of an epimutation. We provide here for the first time evidence for efficient reversion of a constitutive epimutation in the sperm…

ProbandAdultMaleGenetic counselingRussell-Silver SyndromeBiologymedicine.disease_causeGermlineEpigenesis GeneticGenomic ImprintingGene OrderGeneticsmedicineHumansExomeEpigeneticsPromoter Regions GeneticMolecular BiologyGenetics (clinical)GeneticsMutationSilver–Russell syndromeHigh-Throughput Nucleotide SequencingGeneral MedicineDNA Methylationmedicine.diseaseSilver-Russell SyndromeGerm CellsPhenotypeGene Expression RegulationGenetic LociDNA methylationCpG IslandsFemaleRNA Long NoncodingHuman molecular genetics
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The role of standard software packages in mediating management accounting knowledge

2006

PurposeThis paper aims to analyse how cost accounting knowledge is mediated in a large multinational organisation employing a company‐wide enterprise resource planning system and off‐the‐shelf activity based costing software to create a uniform profitability management system within the organisation.Design/methodology/approachThe case analysis is informed by the theoretical notions of dis‐and re‐embedding of expert knowledge, expert systems and standards.FindingsThe results indicate that standardised cost accounting software packages may be useful not only because of their superior data processing properties and technical efficiency, but also because of their usability in overcoming resista…

Process managementbusiness.industryComputer scienceCost accountingAccountingcomputer.software_genreExpert systemSubject-matter expertThroughput accountingAccountingManagement accountingChange management (engineering)Package development processBusiness and International ManagementbusinesscomputerEnterprise resource planningQualitative Research in Accounting & Management
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A high-throughput chemical screen in DJ-1β mutant flies identifies zaprinast as a potential Parkinson's disease treatment

2021

AbstractDopamine replacement represents the standard therapy for Parkinson’s disease (PD), a common, chronic, and incurable neurological disorder; however, this approach only treats the symptoms of this devastating disease. In the search for novel disease-modifying therapies that target other relevant molecular and cellular mechanisms, Drosophila has emerged as a valuable tool to study neurodegenerative diseases due to the presence of a complex central nervous system, the blood–brain barrier, and a similar neurotransmitter profile to humans. Human PD-related genes also display conservation in flies; DJ-1β is the fly ortholog of DJ-1, a gene for which mutations prompt early-onset recessive P…

Programmed cell deathParkinson's diseasePurinonesSistema nerviós central MalaltiesMutantProtein Deglycase DJ-1PharmacologyBiologymedicine.disease_causechemistry.chemical_compoundNeurologiaDopaminemedicineAnimalsPharmacology (medical)GPR35 agonistPharmacologyHigh-throughput screeningPhosphodiesteraseParkinson Diseasemedicine.diseaseOxidative StresschemistryParkinson’s diseaseDrosophilaOriginal ArticleZaprinastNeurology (clinical)Phosphodiesterase inhibitorZaprinastGPR35Oxidative stressmedicine.drug
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A TR-FRET based functional assay for screening activators of CARM1

2013

Epigenome is an emerging field that demands selective cell-permeable chemical probes to perturb, especially in vivo, the activity of specific enzymes involved in modulating the epigenetic codes. Coactivator Associated Arginine (R) Methyltransferase 1 (CARM1) is a coactivator of estrogen receptor α (ERα), the main target in human breast cancer. We previously showed that overexpression of CARM1 by two-fold in MCF7 breast cancer cells increased the expression of ERα-target genes involved in differentiation and reduced cell proliferation, leading to the hypothesis that activating CARM1 by chemical activators may be therapeutically effective in breast cancer. Selective, potent, cell-permeable CA…

Protein-Arginine N-MethyltransferasesTime FactorsCARM1CARM1; arginine; FRET; methylation; PABP1High-throughput screeningEstrogen receptorarginineBacMamBreast NeoplasmsBiologyBiochemistryArticleEnzyme activatorCoactivatorFluorescence Resonance Energy TransferHumansEpigeneticsPABP1Molecular BiologyOrganic ChemistryFusion proteinEnzyme ActivationCARM1BiochemistryFRETMCF-7 CellsMolecular MedicineFemalemethylation
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A Genomic, Transcriptomic and Proteomic Look at the GE2270 Producer Planobispora rosea, an Uncommon Actinomycete.

2015

We report the genome sequence of Planobispora rosea ATCC 53733, a mycelium-forming soil-dweller belonging to one of the lesser studied genera of Actinobacteria and producing the thiopeptide GE2270. The P. rosea genome presents considerable convergence in gene organization and function with other members in the family Streptosporangiaceae, with a significant number (44%) of shared orthologs. Patterns of gene expression in P. rosea cultures during exponential and stationary phase have been analyzed using whole transcriptome shotgun sequencing and by proteome analysis. Among the differentially abundant proteins, those involved in protein metabolism are particularly represented, including the G…

ProteomeSequence analysislcsh:MedicineGenomicsBiologyGenomePeptides Cyclic03 medical and health sciencesBacterial ProteinsPlanobispora roseaActinomycetalesGenomic libraryAgricultural and Biological Sciences (all); Biochemistry Genetics and Molecular Biology (all); Medicine (all)lcsh:ScienceGeneProteomic Look030304 developmental biologyWhole genome sequencingGenetics0303 health sciencesMultidisciplinaryBiochemistry Genetics and Molecular Biology (all)030306 microbiologyShotgun sequencingSequence Analysis RNAMedicine (all)lcsh:RUncommon Actinomycete.High-Throughput Nucleotide SequencingGenomicsRNA BacterialThiazolesGlucoseTranscriptomicAgricultural and Biological Sciences (all)Multigene FamilyProteomeGenomiclcsh:QTranscriptomeGenome BacterialMetabolic Networks and PathwaysResearch ArticlePLoS ONE
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Proteomics of Galápagos Marine Iguanas Links Function of Femoral Gland Proteins to the Immune System

2020

Femoral glands secrete a wax-like substance on the inner side of lizard hind legs, which is thought to function as a mode of chemical communication. Though the minor volatile fraction is well studied, the major protein fraction remains enigmatic. Here, we use proteomics to analyze proteins in femoral gland secretions of the Galápagos marine iguana. Although we found no evidence for proteins and peptides involved in chemical communication, we found several immune-regulatory proteins which also demonstrate anti-microbial functions. Accordingly, we show that femoral gland proteins and peptides function as a barrier against microbial infection and may prevent the rapid degradation of volatile s…

ProteomicsProteomeProteomicsBiochemistryAnalytical ChemistryAnti-Infective AgentsTandem Mass Spectrometrydatabase designprotease inhibitor protein identificationLungSkin0303 health sciencesMuscles030302 biochemistry & molecular biologyBrainHigh-Throughput Nucleotide SequencingHeartBlood proteinsanimal modelsmarine iguanaBiochemistryOrgan SpecificityProteomeEcuadorBacillus subtilisPulmonary Surfactant-Associated ProteinsGalectinsAntileukoproteinaseBiologyprotease inhibitor03 medical and health sciencesproteomicsImmune systemfemoral glandsevolutionEndopeptidasesEscherichia coliAnimalsHumanstissuesMolecular Biology030304 developmental biologyGalectinInnate immune systemChemotactic FactorsResearchMyocardiumImmunity Innateimmune systemIguanasMuramidaseApoproteinsTranscriptomeFunction (biology)Molecular & Cellular Proteomics
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