Search results for "yellow"

showing 10 items of 115 documents

The nucleotide sequence of a recombinant tomato yellow leaf curl virus strain frequently detected in Sicily isolated from tomato plants carrying the …

2017

In July 2016, an aggressive syndrome of tomato yellow leaf curl disease was reported in Sicily in tomato plants carrying the Ty-1 resistance gene. A total of 34 samples were collected and analyzed. Twenty-seven out of the 34 samples analyzed appeared to contain only recombinant molecules. One full sequence was obtained after cloning. Alignments and plot similarity analysis showed that the genome of the recombinant, named TYLCV-IL[IT:Sic23:16], was mostly derived from tomato yellow leaf curl virus (TYLCV), with a small region of 132 nucleotides in the non-coding region between the stem-loop and the start of the V2 ORF replaced by 124 nucleotides derived from a virus of a different species, t…

0106 biological sciences0301 basic medicineGenes ViralSequence analysisvirusesBiology01 natural sciencesViruslaw.invention03 medical and health sciencesSolanum lycopersicumlawVirologyPlant ImmunityCultivarTomato yellow leaf curl virusGeneSicilyDisease ResistancePlant DiseasesRecombination GeneticBase SequencefungiNucleic acid sequencefood and beveragesHigh-Throughput Nucleotide SequencingSettore AGR/12 - Patologia VegetaleGeneral MedicineSequence Analysis DNAbiology.organism_classificationPlants Genetically ModifiedVirologyPlant LeavesHorticulture030104 developmental biologyBegomovirusRecombinant DNALeaf curlDisease Susceptibility010606 plant biology & botanyGeminivirus molecular evolution recombination
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Proposal of a Citrus translational genomic approach for early and infield detection of Flavescence dorée in Vitis

2014

Flavescence dore´e (FD) is one of the most widely known grapevine yellows disease and one of the most unabated worldwide in the viticulture sector. In this paper, we outline a strategy for developing an integrated system of technologies to enable rapid, early disease FD detection and diagnosis. We propose the deployment of a newly developed sensor device, the differential mobility spectrometer (DMS), which has shown positive results with a similar vector-borne disease in Citrus. We have previously demonstrated that the gas chromatograph DMS (GC/DMS) can distinguish various citrus diseases, and the system may also allow detection of volatile organic compound (VOC) signals from a tree of othe…

0106 biological sciences0301 basic medicinePlant ScienceComputational biologyBiology01 natural sciences03 medical and health sciencesSettore AGR/07 - Genetica AgrariaBotanyProfile analysisPlant systemEcology Evolution Behavior and SystematicsDifferential mobility spectrometer early detection Flavescence dore´e phytoplasma qRT-PCR ELISA VitisfungiEarly diseasefood and beveragesSettore AGR/12 - Patologia VegetaleGrapevine yellowsSettore AGR/02 - Agronomia E Coltivazioni ErbaceeSettore AGR/03 - Arboricoltura Generale E Coltivazioni Arboree030104 developmental biologySettore AGR/14 - PedologiaFlavescence doréeGas chromatographyGas chromatography–mass spectrometryDisease transmission010606 plant biology & botany
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Thioredoxin (Trxo1) interacts with proliferating cell nuclear antigen (PCNA) and its overexpression affects the growth of tobacco cell culture.

2017

Thioredoxins (Trxs), key components of cellular redox regulation, act by controlling the redox status of many target proteins, and have been shown to play an essential role in cell survival and growth. The presence of a Trx system in the nucleus has received little attention in plants, and the nuclear targets of plant Trxs have not been conclusively identified. Thus, very little is known about the function of Trxs in this cellular compartment. Previously, we studied the intracellular localization of PsTrxo1 and confirmed its presence in mitochondria and, interestingly, in the nucleus under standard growth conditions. In investigating the nuclear function of PsTrxo1 we identified proliferati…

0106 biological sciences0301 basic medicineTFs transcription factorsOverexpressionBiologíaBiFC bimolecular fluorescence complementationClinical BiochemistryCell Culture TechniquesTobacco BY-2 cells01 natural sciencesBiochemistryTBY-2 tobacco bright yellow-2DTT 14-dithiothreitolBimolecular fluorescence complementationThioredoxinsGene Expression Regulation PlantTrx thioredoxinlcsh:QH301-705.5GFP green fluorescent proteinlcsh:R5-920biologyProliferating cell nuclear antigen (PCNA)Cell cycleGlutathione3. Good healthCell biologyMitochondriaNTR NADPH thioredoxin reductaseProtein TransportDEM diethyl maleateRT-qPCR Reverse transcription quantitative polymerase chain reactionThioredoxinlcsh:Medicine (General)Oxidation-ReductionAMS 4-acetamido-4-maleimidylstilbene-22-disulfonic acidResearch PaperPCNA proliferating cell nuclear antigenOex overexpressingCell cycleNucleusThioredoxin o103 medical and health sciencesROS reactive oxygen speciesDownregulation and upregulationProliferating Cell Nuclear AntigenTobaccoDAPI 46-diamidine-2-phenylindolmCBM monochlorobimaneCellular compartmentCell NucleusCell growthOrganic ChemistryBotánicaPeasMolecular biologyYFP yellow fluorescent proteinProliferating cell nuclear antigenTBS Tris-buffered salineOD optical density030104 developmental biologylcsh:Biology (General)Cell cultureRNA reactive nitrogen speciesbiology.proteinPrx peroxiredoxinBSA bovine serum albumin010606 plant biology & botanyRedox biology
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Begomoviruses Infecting Tomato Crops in Panama

2015

The key regions in Panama involved in open field- and greenhouse-grown commercial tomato production, including the Chiriquí, Veraguas, Herrera, Los Santos, Coclé and Panama Oeste provinces, were surveyed for the incidence and distribution of begomoviruses in the growing seasons of 2011 and 2012. The surveys took place in 14 of the 51 districts of the above-mentioned provinces and comprised all relevant tomato production areas of the provinces. A total of 28 tomato plots were surveyed. The exact location of each plot was geo-referenced using a hand-held Global Positioning System unit. In total, 319 individual tomato plants (181 in 2011 and 138 in 2012) were sampled. Plants displayed diverse …

0106 biological sciences0301 basic medicineVeterinary medicinePhysiologyGrowing seasonTomato leaf curl Sinaloa viruPlant ScienceBiology01 natural scienceslaw.invention03 medical and health sciencesSolanum lycopersicumlawGenusBotanyTomato yellow mottle viruGeneticsLeaf sizePolymerase chain reactionPanamafungiBegomovirusSettore AGR/12 - Patologia Vegetalefood and beveragesbiology.organism_classificationPolymerase chain reactionTomato yellow mottle virus030104 developmental biologyKey (lock)Potato yellow mosaic Panama viruAgronomy and Crop Science010606 plant biology & botanyJournal of Phytopathology
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Genomic Differentiation and Demographic Histories of Atlantic and Indo-Pacific Yellowfin Tuna (Thunnus albacares) Populations.

2017

Recent developments in the field of genomics have provided new and powerful insights into population structure and dynamics that are essential for the conservation of biological diversity. As a commercially highly valuable species, the yellowfin tuna (Thunnus albacares) is intensely exploited throughout its distribution in tropical oceans around the world, and is currently classified as near threatened. However, conservation efforts for this species have so far been hampered by limited knowledge of its population structure, due to incongruent results of previous investigations. Here, we use whole-genome sequencing in concert with a draft genome assembly to decipher the global population str…

0106 biological sciences0301 basic medicineYellowfin tunademographypopulation genomicsDemographic historyPopulation010603 evolutionary biology01 natural sciencesPopulation genomics03 medical and health sciencesGeneticseducationEcology Evolution Behavior and Systematicseducation.field_of_studyNear-threatened speciesbiologyconservationbiology.organism_classificationFishery030104 developmental biologyfisheries managementwhole-genome sequencingtunaTunahuman activitiesIndo-PacificThunnusResearch ArticleGenome biology and evolution
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Nest defence against avian brood parasites is promoted by egg-removal events in a cowbird–host system

2011

Recent studies of birds have found that the antiparasite behaviour of host species is modified by social learning. We tested whether individual or social learning modifies the nest defence of yellow warblers, Setophaga petechia, against the parasitic brown-headed cowbird, Molothrus ater. Using field experiments, we exposed warblers to simulated events of nest parasitism and predation, or allowed them to observe conspecifics mobbing a cowbird. Intensity of nest defence by yellow warblers was greater after simulated threats at their nest than after they had observed mobbing of cowbirds by conspecifics. Warblers defended their nests more aggressively when they perceived a cowbird as an egg pre…

0106 biological sciencesBrood parasiteCowbirdbiologyEcologyHost (biology)05 social sciencesParasitismbiology.organism_classification010603 evolutionary biology01 natural sciencesMobbing (animal behavior)PredationNestantiparasite response brown-headed cowbird individual learning Molothrus ater nest defence Setophaga petechia social learning yellow warbler0501 psychology and cognitive sciencesAnimal Science and Zoology050102 behavioral science & comparative psychologyPredatorEcology Evolution Behavior and SystematicsAnimal Behaviour
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Constitutive expression of clathrin hub hinders elicitor-induced clathrin-mediated endocytosis and defense gene expression in plant cells.

2012

International audience; Endocytosis has been recently implicated in the signaling network associated with the recognition of microbes by plants. In a previous study, we showed that the elicitor cryptogein was able to induce clathrin-mediated endocytosis (CME) in tobacco suspension cells. Herein, we investigate further the induced CME by means of a GFP-tagged clathrin light chain and a CME inhibitor, the hub domain of clathrin heavy chain. Hub constitutive expression does affect neither cell growth nor constitutive endocytosis but abolishes cryptogein-induced CME. Such an inhibition has no impact on early events in the cryptogein signaling pathway but reduces the expression of defense-associ…

0106 biological sciencesCell signaling[SDV]Life Sciences [q-bio]Recombinant Fusion ProteinseducationBiophysicsGene Expressionbright yellow-2BiologyEndocytosisGenes Plant01 natural sciencesBiochemistryClathrincryptogeinCell LineFungal Proteins03 medical and health sciencesMicroscopy Electron TransmissionStructural BiologyGene expressionTobaccoGeneticscell signalingRNA MessengerMolecular Biology030304 developmental biologyPlant Proteins0303 health sciencesCell growthCell MembraneCell BiologyReceptor-mediated endocytosisPlants Genetically ModifiedClathrinEndocytosisElicitorCell biologyRNA PlantClathrin Heavy Chains[SDE]Environmental Sciencesbiology.proteinClathrin Light ChainsSignal transduction010606 plant biology & botanySignal TransductionFEBS letters
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Trophic interactions between introduced lake trout (Salvelinus namaycush) and native Arctic charr (S. alpinus) in a large Fennoscandian subarctic lake

2014

Introduced fishes may have major impacts on community structure and ecosystem function due to competitive and predatory interactions with native species. For example, introduced lake trout (Salvelinus namaycush) has been shown to replace native salmonids and induce major trophic cascades in some North American lakes, but few studies have investigated trophic interactions between lake trout and closely related native Arctic charr (S.alpinus) outside the natural distribution of the former species. We used stomach content and stable isotope analyses to investigate trophic interactions between introduced lake trout and native Arctic charr in large subarctic Lake Inarijarvi in northern Finland. …

0106 biological sciencesIMPACTSYELLOWSTONE LAKEAquatic ScienceBiology010603 evolutionary biology01 natural sciencespiscivoryWHITEFISHFOOD WEBSBrown troutFISHSTABLE-ISOTOPESstable isotope analysisProfundal zone14. Life underwaterTrophic cascadeEcology Evolution Behavior and SystematicsTrophic levelSalvelinusresource competitionEcologyInvasive speciesBROWN TROUTEcology010604 marine biology & hydrobiologybiology.organism_classificationVENDACE COREGONUS-ALBULAADAPTIVE RADIATIONTroutArcticForage fish1181 Ecology evolutionary biologyniche segregationSALMO-TRUTTAta1181predation
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Multilocus sequence typing confirms the close genetic inter-relatedness between three distinct flavescence doree phytoplasma strain clusters and grou…

2007

ABSTRACT Vineyards of southern France and northern Italy are affected by the flavescence dorée (FD) phytoplasma, a quarantine pathogen transmitted by the leafhopper of Nearctic origin Scaphoideus titanus . To better trace propagation of FD strains and identify possible passage between the vineyard and wild plant compartments, molecular typing of phytoplasma strains was applied. The sequences of the two genetic loci map and uvrB - degV , along with the sequence of the secY gene, were determined among a collection of FD and FD-related phytoplasmas infecting grapevine, alder, elm, blackberry, and Spanish broom in Europe. Sequence comparisons and phylogenetic analyses consistently indicated the…

0106 biological sciencesPhytoplasmaMolecular Sequence DataAlnus01 natural sciencesApplied Microbiology and BiotechnologyFLAVESCENCE DOREEMALADIE DES PLANTES03 medical and health sciencesPlant MicrobiologyPhylogeneticsMOLLICUTEBotanyPHYTOPLASMEVitisPhylogenyComputingMilieux_MISCELLANEOUS030304 developmental biologyDNA PrimersPlant Diseases2. Zero hungerGenetics[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesEcologyPhylogenetic treebiologyBase SequenceJAUNISSEGrapevine yellowsSequence Analysis DNADIVERSITEbiology.organism_classificationScaphoideus titanusLeafhopperEuropeGene ComponentsPhytoplasmaGenes BacterialMultilocus sequence typingFlavescence doréePolymorphism Restriction Fragment Length010606 plant biology & botanyFood ScienceBiotechnology
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Abstracts of presentations on plant protection issues at the fifth international Mango Symposium Abstracts of presentations on plant protection issue…

1997

0106 biological sciencesZucchini yellow mosaic virusBarley stripe mosaic virusbiologyEcology (disciplines)Plant ScienceCoat proteinbiology.organism_classification01 natural sciencesCucumber mosaic virus010602 entomologyInsect ScienceInternational congressBotany010606 plant biology & botanyPhytoparasitica
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