showing 57 related works from this author
Identifying small pelagic Mediterranean fish schools from acoustic and environmental data using optimized artificial neural networks
2019
Abstract The Common Fisheries Policy of the European Union aims to exploit fish stocks at a level of Maximum Sustainable Yield by 2020 at the latest. At the Mediterranean level, the General Fisheries Commission for the Mediterranean (GFCM) has highlighted the importance of reversing the observed declining trend of fish stocks. In this complex context, it is important to obtain reliable biomass estimates to support scientifically sound advice for sustainable management of marine resources. This paper presents a machine learning methodology for the classification of pelagic species schools from acoustic and environmental data. In particular, the methodology was tuned for the recognition of an…
Pelagic species identification by using a PNN neural network and echo-sounder data
2017
For several years, a group of CNR researchers conducted acoustic surveys in the Sicily Channel to estimate the biomass of small pelagic species, their geographical distribution and their variations over time. The instrument used to carry out these surveys is the scientific echo-sounder, set for different frequencies. The processing of the back scattered signals in the volume of water under investigation determines the abundance of the species. These data are then correlated with the biological data of experimental catches, to attribute the composition of the various fish schools investigated. Of course, the recognition of the fish schools helps to produce very good results, that is very clo…
Holocene millennial-scale productivity variations in the Sicily Channel (Mediterranean Sea)
2008
[1] The calcareous nannofossil assemblages of Ocean Drilling Program Hole 963D from the central Mediterranean Sea have been investigated to document oceanographic changes in surface waters. The studied site is located in an area sensitive to large-scale atmospheric and climatic systems and to high- and low-latitude climate connection. It is characterized by a high sedimentation rate (the achieved mean sampling resolution is <70 years) that allowed the Sicily Channel environmental changes to be examined in great detail over the last 12 ka BP. We focused on the species Florisphaera profunda that lives in the lower photic zone. Its distribution pattern shows repeated abundance fluctuations of …
Alteration effects of volcanic ash in seawater: Anomalous Y/Ho ratios in coastal waters of the Central Mediterranean sea
2007
This paper presents the results of a study based on data collected during the oceanographic cruise ANSIC 2001 carried out in the Ionian Sea during the explosive activity of Mount Etna in the summer of 2001. Anomalous low values of Y/Ho ratios in seawater suggest extensive scavenging processes on the surfaces of smectitic alteration products, with Y and Ho fractionation controlled by the differences in their electronic configurations and behaviour during solution/surface complexation equilibria. These processes can also be traced through the presence of significant tetrad effects recorded in the chondrite-normalised Rare Earth Elements and Yttrium (YREEs) patterns of suspended particulate ma…
Direct determination of total mercury in phosphate rock using alkaline fusion digestion
2014
The aim of this work was to develop a new method to determine the mercury (Hg) concentrations in phosphate rock using a dedicated analytical instrument (the DMA80 Tricell by Milestone) that employs an integrated sequence of thermal decomposition followed by catalyst conversion, amalgamation and atomic absorption spectrophotometry. However, this instrument underestimates Hg concentrations when phosphorite and apatite rocks are investigated with a classic thermal decomposition treatment that complies with US EPA method 7473. Therefore, to improve the recovery of total Hg, we performed alkaline fusion digestion (AFD) directly inside the furnace of the instrument, using BCR(32) as a certified r…
Different key roles of mesoscale oceanographic structures and ocean bathymetry in shaping larval fish distribution pattern: A case study in Sicilian …
2016
Fish larvae data collected in year 2009 were used to examine the effects of particular environmental conditions on the structure of larvalassemblages in two oligotrophic Mediterranean areas (the Southern Tyrrhenian Sea and the Strait of Sicily). For this purpose, relationships with environmental variables (temperature, salinity and fluorescence), zooplankton biomass, water circulation and bathymetry are discussed. Hydrodynamic conditions resulted very differently between two study areas. The Southern Tyrrhenian Sea was characterized by moderate shallow circulation compared to the Strait of Sicily. In this framework, distribution pattern of larval density in the Tyrrhenian Sea was mainly dri…
Planktonic stages of small pelagic fishes (Sardinella aurita and Engraulis encrasicolus) in the central Mediterranean Sea: The key role of physical f…
2018
Abstract Multidisciplinary studies are recently aiming to define diagnostic tools for fishery sustainability by coupling ichthyoplanktonic datasets, physical and bio-geochemical oceanographic measurements, and ocean modelling. The main goal of these efforts is to understand those processes that control the dispersion and fate of fish larvae and eggs, and thus tuning the inter-annual variability of the biomass of small pelagic fish species. In this paper we analyse the distribution of eggs and larvae as well as the biological features of the two species of pelagic fish, Engraulis encrasicolus and Sardinella aurita in the north-eastern sector of the Sicily Channel (Mediterranean Sea) from ich…
STOCHASTIC DYNAMICS OF TWO PICOPHYTOPLANKTON POPULATIONS IN A REAL MARINE ECOSYSTEM
2013
A stochastic reaction-diffusion-taxis model is analyzed to get the stationary distribution along water column of two species of picophytoplankton, that is picoeukaryotes and Prochlorococcus. The model is valid for weakly mixed waters, typical of the Mediterranean Sea. External random fluctuations are considered by adding a multiplicative Gaussian noise to the dynamical equation of the nutrient concentration. The statistical tests show that shape and magnitude of the theoretical concentration profile exhibit a good agreement with the experimental findings. Finally, we study the effects of seasonal variations on picophytoplankton groups, including an oscillating term in the auxiliary equation…
Low frequencies noise effects on behaviour of Sparus aurata juveniles
2019
Human activities in the oceans, such as marine traffic and Deep Sea Mining (DSM), are increasing in the last years (Ross 2005; Calvo et al 2016). Underwater noise in the oceans, especially at lower frequencies, is mainly produced by marine traffic and DSM could increase this noise in the next future. Marine Strategy Framework Directive promotes the achievement of a good quality environmental status and aims to monitor “continuous low frequency sound” trend in the ambient noise level within the 1/3 octave bands centred at 63 and 125 Hz. The aim of this study is to evaluate the behavioural changes of Sparus aurata juveniles exposed to a four different acoustic signals in a tank. The emitted s…
Analysis and assessment of trace element contamination in offshore sediments of the Augusta Bay (SE Sicily): A multivariate statistical approach base…
2014
Abstract An application of multivariate statistical methods is provided to identify anthropogenic contaminants and lithogenic elements in offshore sediments collected near the heavily industrialized Augusta Bay, Sicily. An exploratory statistical technique, based on canonical correlation analysis (CCA) and mixture density estimation approach, is used for distinguishing between natural and anthropogenic contributions of trace elements in the investigated sediments. Following the intensive industrialization of Augusta area, marine sediments reveal the severe impact of local anthropogenic activities for many elements (e.g. As, Cd, Hg, Pb, and Sb), which are considered very dangerous for the en…
AQUATIC ACOUSTIC NOISE: BEHAVIORAL AND MOLECULAR RESPONSES IN ECHINODERMS, THE CASE OF A. LIXULA (LINNAEUS, 1758) SEA URCHINS
2018
Anthropic noise is considered a real pollutant, in particular the submarine noise. The impact on biodiversity is not yet sufficiently understood. Further research is needed to evaluate any negative effects. The noises associated with anthropogenic activities are increasing: shipments, seismic surveys, sonar, recreational rowing and future mineral extraction activities from ocean depths (DSM). These noises are having an impact on the welfare of many marine species. The understanding of the effects on biodiversity could be important for the creation of guidelines, laws or rules for the most environmentally sustainable exploitation of natural resources. Our study aims to investigate the motili…
Dynamics of Two Picophytoplankton Groups in Mediterranean Sea: Analysis of the Deep Chlorophyll Maximum by a Stochastic Advection-Reaction-Diffusion …
2013
A stochastic advection-reaction-diffusion model with terms of multiplicative white Gaussian noise, valid for weakly mixed waters, is studied to obtain the vertical stationary spatial distributions of two groups of picophytoplankton, i.e., picoeukaryotes and Prochlorococcus, which account about for 60% of total chlorophyll on average in Mediterranean Sea. By numerically solving the equations of the model, we analyze the one-dimensional spatio-temporal dynamics of the total picophytoplankton biomass and nutrient concentration along the water column at different depths. In particular, we integrate the equations over a time interval long enough, obtaining the steady spatial distributions for th…
Behavioural and biochemical stress responses of Palinurus elephas after exposure to boat noise pollution in tank
2014
This study examined the effects of boat noise on the behavioural and biochemical parameters of the Mediterranean spiny lobster (Palinurus elephas).The experiment was conducted in a tank equipped with a video and audio recording system. 18 experimental trials, assigned to boat noise and control conditions, were performed using lobsters in single and group of 4 specimens. After a 1. h habituation period, we audio- and video-recorded the lobsters for 1. h. During the experimental phase, the animals assigned to the boat groups were exposed to boat noise pollution (a random sequence of boat noises). Exposure to the noise produced significant variations in locomotor behaviours and haemolymphatic …
Relationship between lanthanide contents in aquatic turtles and environmental exposures
2013
International audience; Trace elements released in the environment during agricultural practices can be incorporated and accumulated in biological fluids and tissues of living organisms. The assessment of these exposures were carried out investigating lanthanide distributions in blood and exoskeleton samples collected from Emys trinacris turtle specimens coming from sites with anthropogenic discharge in western and south Sicily, along migration paths of many bird species from Africa to Europe. The data show a significant (Rxy = 0.72; Rxy > 0.67; α = 0.025) linear relationship between the size of turtle specimens and the lanthanide contents in blood lower than 0.4 μg L−1 whereas this relatio…
Effects of predator and shelter conditioning on hatchery-reared white seabream Diplodus sargus (L., 1758) released at sea
2012
Abstract The behavioural deficit of hatchery reared (HR) fish used for stock enhancement is the main cause of their low survival in the wild. In this study the effects of predator and shelter conditioning on survival and dispersal of HR white seabream ( Diplodus sargus ) released at sea were investigated. The hypotheses were that conditioned white seabream would avoid predators more efficiently and would be more capable to shelter, showing higher survival and smaller dispersal than naive fish. Six thousand HR white seabream (6.32 ± 0.93 cm total length) were allocated in twelve plastic tanks and divided in four experimental groups: three groups were conditioned with a predator, a refuge or …
Amino acid composition in eyes from zebrafish (Danio rerio) and sardine (Sardina pilchardus) at the larval stage
2016
A comparative study was performed to identify differences in the amino acid composition of the eyes from zebrafish (Danio rerio) and sardine (Sardina pilchardus) larvae and their link to the environmental adaption of the species. Amino acids in the acidic hydrolysates of eyes from 11 zebrafish and 12 sardine were determined with the use of high-performance liquid chromatography involving precolumn derivatization with ortho-phthalaldehyde. Differences in the content of most amino acids were detected between zebrafish and sardine. These amino acids were aspartate, glutamate, serine, glycine, threonine, arginine, methionine, valine, phenylalanine, isoleucine, leucine and lysine. Of particular …
Noise Induced Phenomena in the Dynamics of Two Competing Species
2015
Noise through its interaction with the nonlinearity of the living systems can give rise to counter-intuitive phenomena. In this paper we shortly review noise induced effects in different ecosystems, in which two populations compete for the same resources. We also present new results on spatial patterns of two populations, while modeling real distributions of anchovies and sardines. The transient dynamics of these ecosystems are analyzed through generalized Lotka-Volterra equations in the presence of multiplicative noise, which models the interaction between the species and the environment. We find noise induced phenomena such as quasi-deterministic oscillations, stochastic resonance, noise …
Spatio-temporal dynamics of a planktonic system and chlorophyll distribution in a 2D spatial domain: matching model and data
2017
AbstractField data on chlorophyll distribution are investigated in a two-dimensional spatial domain of the Mediterranean Sea by using for phytoplankton abundances an advection-diffusion-reaction model, which includes real values for physical and biological variables. The study exploits indeed hydrological and nutrients data acquired in situ, and includes intraspecific competition for limiting factors, i.e. light intensity and phosphate concentration. As a result, the model allows to analyze how both the velocity field of marine currents and the two components of turbulent diffusivity affect the spatial distributions of phytoplankton abundances in the Modified Atlantic Water, the upper layer…
Chronological records of metal deposition in sediments from the Strait of Sicily, central Mediterranean: assessing natural fluxes and anthropogenic a…
2010
Abstract Sediment box-cores were recovered from the Strait of Sicily along two onshore–offshore transects in water depths of 29–500 m. Samples were dated by 210 Pb and analysed for major and trace elements. Inspections of chronological profiles integrated with application of statistical algorithms to the geochemical dataset and supported by in situ hydrological observations were used to assess factors driving element distributions. Mineralogical and chemical variability of sediments offshore of the southwestern Sicily coast reflect the irregular sea floor morphology of the Adventure Bank. Anthropogenic inputs explain enrichments with respect to background values for Sb, As, Pb, and Hg, that…
Rare earth elements distribution in seawater and suspended particulate of the Central Mediterranean Sea
2004
Rare earth element (REE) content in suspended and dissolved phases from the Strait of Sicily (Central Mediterranean Sea) has been measured. Vertical profiles of several dissolved REEs along the water column reflect the 3-D oceanographic features of the studied area and identifies the different water masses present there. Shale-normalized REE distribution patterns and derived parameters calculated for the suspended particulate show different atmospheric dust-surface inputs and their interactions with seawater. Finally, combined information from [La/Yb]N, ratios, REE/La ratios and Eu anomalies measured in the suspended particulate suggest an important contribution of volcanic materials from t…
Effects of waterg gun on echinoderms: biochemical changes on sea urchin (Arbacia lixula) and sea cucumber (Holothuria tubulosa)
2019
Sources Airguns and Waterguns are used in seismic exploration the marine seafloor for different purposes such as oil and gas search, or geological-geodynamic reconstruction. In this technique a bubble of compressed air is produced with a consequently production of loud sound wave penetrating the ocean floor. The impact of seismic Airguns was assessed in some cetaceans (Kyhn et al. 2019), fish species and invertebrate (Carroll et al. 2017), but we need to know more. In this study we evaluate the biochemical changes in sea urchin (Arbacia lixula) and sea cucumber (Holothuria tubulosa) exposed to a 20 minutes of watergun noise (1 pulse each 10 s) at a distance of 50 m. For each species 40 indi…
Vessel noise pollution as a human threat to fish: assessment of the stress response in gilthead sea bream (Sparus aurata, Linnaeus 1758)
2016
This study examined the effects of boat noise pollution on the stress indices of gilthead sea bream (Sparus aurata, Linnaeus 1758). To assess the stress response in these fish, biometric values and plasma parameters such as ACTH, cortisol, glucose, lactate, haematocrit, Hsp70, total protein, cholesterol, triglycerides and osmolarity were analysed. After acclimatization of the animals, the experiment was carried out in a tank fitted with underwater speakers where the fish were exposed to sound treatments (in duplicate) consisting of: 10 days of no sound (control treatment; the animals were only exposed to the experimental tank’s background noise) and 10 days of noise derived from original re…
Pattern Classification from Multi-beam Acoustic Data Acquired in Kongsfjorden
2021
Climate change is causing a structural change in Arctic ecosystems, decreasing the effectiveness that the polar regions have in cooling water masses, with inevitable repercussions on the climate and with an impact on marine biodiversity. The Svalbard islands under study are an area greatly influenced by Atlantic waters. This area is undergoing changes that are modifying the composition and distribution of the species present. The aim of this work is to provide a method for the classification of acoustic patterns acquired in the Kongsfjorden, Svalbard, Arctic Circle using multibeam technology. Therefore the general objective is the implementation of a methodology useful for identifying the a…
The role of noise on the steady state distributions of phytoplankton populations
2016
The spatio-temporal behaviour of total chlorophyll concentration is investigated in the middle of the Tyrrhenian Sea by using a stochastic approach. The study is based on a reaction-diffusion-taxis model, which is used to analyse the dynamics of five phytoplankton groups, responsible for about 80% of the total chlorophyll a inside the euphotic zone of the water column. The analysis is performed by considering: (i) the intraspecific competition of the phytoplanktonic groups for limiting factors, i.e. light intensity and nutrient concentration, (ii) the seasonal changes of environmental variables, and (iii) the random fluctuations of the components of the velocity field and temperature. Speci…
Are mussels able to distinguish underwater sounds? Assessment of the reactions of Mytilus galloprovincialis after exposure to lab-generated acoustic …
2016
This study examined the effects of lab-generated acoustic signals on the behaviour and biochemistry of Mediterranean mussels (Mytilus galloprovincialis). The experiment was carried out in a tank equipped with a video-recording system using six groups of five mussels exposed to five acoustic treatments (each treatment was replicated three times) for 30 min. The acoustic signals, with a maximum sound pressure level of 150 dB rms re 1 μPa, differed in frequency range as follows: low (0.1–5 kHz), mid-low (5–10 kHz), mid (10–20 kHz), mid-high (20–40 kHz) and high (40–60 kHz). The exposure to sweeps did not produce any significant changes in the mussels' behaviour. Conversely, the specimens expos…
Low-Cost Synthesis of Smart Biocompatible Graphene Oxide Reduced Species by Means of GFP.
2015
The aim of this work is focused on the engineering of biocompatible complex systems composed of an inorganic and bio part. Graphene oxide (GO) and/or graphite oxide (GtO) were taken into account as potential substrates to the linkage of the protein such as Anemonia sulcata recombinant green fluorescent protein (rAsGFP). The complex system is obtained through a reduction process between GO/GtO and rAsGFP archiving an environmentally friendly biosynthesis. Spectroscopic measurements support the formation of reduced species. In particular, photoluminescence shows a change in the activity of the protein when a bond is formed, highlighted by a loss of the maximum emission signal of rAsGFP and a …
Automatic classification of acoustically detected krill aggregations: A case study from Southern Ocean
2022
Acoustic surveys represent the standard methodology to assess the spatial distribution and abundance of pelagic organisms characterized by aggregative behaviour. The species identification of acoustically observed aggregations is usually performed by taking into account the biological sampling and according to expert-based knowledge. The precision of survey estimates, such as total abundance and spatial distribution, strongly depends on the efficiency of acoustic and biological sampling as well as on the species identification. In this context, the automatic identification of specific groups based on energetic and morphological features could improve the species identification process, allo…
Profiling the physiological and molecular response to sulfonamidic drag in Procambarus clarkii
2014
Sulfamethoxazole (SMZ) is one of the most widely employed sulfonamides. Because of the widespread use of SMZ, a considerable amount is indeed expected to be introduced into the environment. The cytotoxicity of SMZ relies mainly on arylhydroxylamine metabolites (S-NOH) of SMZ and it is associated with the production of reactive oxygen species (ROS). There is limited information about the toxic potential of SMZ at the cellular and molecular levels, especially in aquatic and/or non-target organisms. In the present study, the red swamp crayfish (Procambarus clarkii), being tolerant to extreme environmental conditions and resistant to disease, was used as a model organism to profile the molecula…
Comprehensive analysis of a Vibrio parahaemolyticus strain extracellular serine protease VpSP37
2015
Proteases play an important role in the field of tissue dissociation combined with regenerative medicine. During the years new sources of proteolytic enzymes have been studied including proteases from different marine organisms both eukaryotic and prokaryotic. Herein we have purified a secreted component of an isolate of Vibrio parahaemolyticus, with electrophoretic mobilities corresponding to 36 kDa, belonging to the serine proteases family. Sequencing of the N-terminus enabled the in silico identification of the whole primary structure consisting of 345 amino acid residues with a calculated molecular mass of 37.4 KDa. The purified enzyme, named VpSP37, contains a Serine protease domain be…
Unsupervised Classification of Acoustic Echoes from Two Krill Species in the Southern Ocean (Ross Sea)
2021
This work presents a computational methodology able to automatically classify the echoes of two krill species recorded in the Ross sea employing scientific echo-sounder at three different frequencies (38, 120 and 200 kHz). The goal of classifying the gregarious species represents a time-consuming task and is accomplished by using differences and/or thresholds estimated on the energy features of the insonified targets. Conversely, our methodology takes into account energy, morphological and depth features of echo data, acquired at different frequencies. Internal validation indices of clustering were used to verify the ability of the clustering in recognizing the correct number of species. Th…
Characterization of small HSPs from Anemonia viridis reveals insights into molecular evolution of alpha crystallin genes among cnidarians.
2014
Gene family encoding small Heat-Shock Proteins (sHSPs containing α-crystallin domain) are found both in prokaryotic and eukaryotic organisms; however, there is limited knowledge of their evolution. In this study, two small HSP genes termed AvHSP28.6 and AvHSP27, both organized in one intron and two exons, were characterised in the Mediterranean snakelocks anemone Anemonia viridis. The release of the genome sequence of Hydra magnipapillata and Nematostella vectensis enabled a comprehensive study of the molecular evolution of α-crystallin gene family among cnidarians. Most of the H. magnipapillata sHSP genes share the same gene organization described for AvHSP28.6 and AvHSP27, differing from …
Stochastic models for phytoplankton dynamics in Mediterranean Sea
2016
Abstract In this paper, we review some results obtained from three one-dimensional stochastic models, which were used to analyze picophytoplankton dynamics in two sites of the Mediterranean Sea. Firstly, we present a stochastic advection–reaction–diffusion model to describe the vertical spatial distribution of picoeukaryotes in a site of the Sicily Channel. The second model, which is an extended version of the first one, is used to obtain the vertical stationary profiles of two groups of picophytoplankton, i.e. Pelagophytes and Prochlorococcus, in the same marine site as in the previous case. Here, we include intraspecific competition of picophytoplanktonic groups for limiting factors, i.e.…
The effect of low frequency noise on the behaviour of juvenile Sparus aurata.
2020
[EN] Anthropogenic activities are causing increased noise levels in the marine environment. To date, few studies have been undertaken to investigate the effects of different noise frequencies on the behaviour of juvenile fish. In this study, the behavioural changes of juvenile gilthead seabream (Sparus aurata) are evaluated when exposed to white noise filtered in third-octave bands centred at 63, 125, 500, and 1000 Hz (sound pressure level, 140-150 dB re 1 mu& x3a1;a) for 7 h. The group dispersion, motility, and swimming height of the fish were analysed before and during the acoustic emission. Dispersion of the fish was found to reduce immediately upon application of low frequency sound (63…
Underwater high frequency noise: Biological responses in sea urchin Arbacia lixula (Linnaeus, 1758)
2020
Marine life is extremely sensitive to the effects of environmental noise due to its reliance on underwater sounds for basic life functions, such as searching for food and mating. However, the effects on invertebrate species are not yet fully understood. The aim of this study was to determine the biochemical responses of Arbacia lixula exposed to high-frequency noise. Protein concentration, enzyme activity (esterase, phosphatase and peroxidase) and cytotoxicity in coelomic fluid were compared in individuals exposed for three hours to consecutive linear sweeps of 100 to 200 kHz lasting 1 s, and control specimens. Sound pressure levels ranged between 145 and 160 dB re 1μPa. Coelomic fluid was …
Modeling of Sensory Characteristics Based on the Growth of Food Spoilage Bacteria
2016
During last years theoretical works shed new light and proposed new hypothesis on the mechanisms which regulate the time behaviour of biological populations in different natural systems. Despite of this, the role of environmental variables in ecological systems is still an open question. Filling this gap of knowledge is a crucial task for a deeper comprehension of the dynamics of biological populations in real ecosystems. In this work we study how the dynamics of food spoilage bacteria influences the sensory characteristics of fresh fish specimens. This topic is crucial for a better understanding of the role played by the bacterial growth on the organoleptic properties, and for the quality …
A new method to value efficiency of enzyme blends for pancreatic tissue digestion.
2010
Islet transplantation, since the 90’s, has been resulting to be one of the best successful example of human cell therapy. Nevertheless, islet isolation procedure is not completely standardized; in fact, more than fifty percent of islets procedures don’t arrive to their transplantation. This is due both to the variability of donor’s pancreas and to an unpredictable enzymatic blend efficiency. Enzymes used in pancreas digestion are extracted from Clostridium histolyticum bacteria and digest several substrates. In particular they have strong collagenolytic activity compared to vertebrate collagenases. However, several impediments persist in human islet isolation success probably due to the var…
Living Coccolithophores from the Gulf of Sirte (Southern Mediterranean Sea) during the summer of 2008
2012
The Gulf of Sirte is a largely unexplored area in the southernmost Mediterranean Sea.We are presenting here 2008 summer data on the distribution pattern of living coccolithophores, a main phytoplankton calcifying group, in 105 samples from 20 stations. The survey includes coastal and offshore stations, enabling us to provide indications on the dynamics of phytoplankton productivity in relation to oceanographic processes. The total coccosphere concentrations show higher values in the offshore stations and lower ones for coastal sites. Umbellosphaera tenuis, Emiliania huxleyi, Florisphaera profunda, Syracosphaera pulchra HOL (Calyptrosphaera oblonga) and Rhabdosphaera spp. dominate the assemb…
EFFECT OF SUBMARINE ACOUSTIC NOISE IN JUVENILE SEA BREAM (SPARUS AURATA) AND MUSSELS (MYTILUS GALLOPROVINCIALIS)
2018
The earth’ resources are running out, the population will increase and further sources will be needed. These, were found in the deep ocean. To date the mining activities (Deep Sea Mining, DSM) they have not started. One impact of DSM could be underwater noise. Considering the noise frequencies of anthropic activities in the ocean, and the European directive on underwater noise control, we stressed the animals with four acoustic 1/3 band noises around: 63 Hz, 125 Hz, 500 Hz, 1kHz. We study the effects on Sparus aurata juveniles, and on Mytilus galloprovincialis. We will analyse behavioural., molecular and biochemical responses Los recursos de la tierra se están agotando, la población aumenta…
Rare-earth elements and yttrium distributions in mangrove coastal water systems: The western Gulf of Thailand
2005
The concentration of rare-earth elements and yttrium (REY) was investigated in dissolved phase, suspended particulate matter, and seafloor sediments of the western coastal area of the Gulf of Thailand. The samples show Eu and Gd positive anomalies in the shale-normalized REY patterns, especially in the suspended particulate matter. On the other hand, a very high REE content was detected in the coastal waters, probably due to the weathering produced by the Mae Klong river waters on rare-earth element (REE)-rich accessory minerals coming from terrains and mineral deposits cropping out in the studied area. The shale-normalized patterns of yttrium and REE estimated for the dissolved phase show …
A pattern recognition approach to identify biological clusters acquired by acoustic multi-beam in Kongsfjorden
2022
The Svalbardsis one of the most intensively studied marine regions in the Artic; here the composition and distribution of marine assemblages are changing under the effect of global change, and marine communities are monitored in order to understand the long-term effects on marine biodiversity. In the present work, acoustic data collected in the Kongsfjorden using multi-beam technology was analyzed to develop a methodology for identifying and classifying 3D acoustic patterns related to fish aggregations. In particular, morphological, energetic and depth features were taken into account to develop a multi-variate classification procedure allowing to discriminate fish species. The results obta…
Shipping noise affecting immune responses of European spiny lobster (Palinuruselephas)
2015
Marine crustaceans are influenced by numerous environmental factors. Environmental stress from pollutants seems to affect their metabolism, growth, moulting, survival, and immune defence. Recently, it has become clear that there is an impact of the global increase in sea noise levels due to shipping traffic on crustacean welfare. Considering the ecological and commercial importance of the European spiny lobster (Palinurus elephas (Fabricius, 1787)) in most parts of the Mediterranean coastal area, in the present study we investigated whether shipping noise pollution contribute to changing the immune parameters of stress in the European spiny lobster. The animals were exposed to a mix of nois…
Evolutionary conserved mechanisms pervade structure and transcriptional modulation of allograft inflammatory factor-1 from sea anemone Anemonia virid…
2017
Gene family encoding allograft inflammatory factor-1 (AIF-1) is well conserved among organisms; however, there is limited knowledge in lower organisms. In this study, the first AIF-1 homologue from cnidarians was identified and characterised in the sea anemone Anemonia viridis. The full-length cDNA of AvAIF-1 was of 913 bp with a 5' -untranslated region (UTR) of 148 bp, a 3'-UTR of 315 and an open reading frame (ORF) of 450 bp encoding a polypeptide with149 amino acid residues and predicted molecular weight of about 17 kDa. The predicted protein possesses evolutionary conserved EF hand Ca2+ binding motifs, post-transcriptional modification sites and a 3D structure which can be superimposed …
Spatio-temporal behaviour of the deep chlorophyll maximum in Mediterranean Sea: Development of a stochastic model for picophytoplankton dynamics
2013
In this paper, by using a stochastic reaction-diffusion-taxis model, we analyze the picophytoplankton dynamics in the basin of the Mediterranean Sea, characterized by poorly mixed waters. The model includes intraspecific competition of picophytoplankton for light and nutrients. The multiplicative noise sources present in the model account for random fluctuations of environmental variables. Phytoplankton distributions obtained from the model show a good agreement with experimental data sampled in two different sites of the Sicily Channel. The results could be extended to analyze data collected in different sites of the Mediterranean Sea and to devise predictive models for phytoplankton dynam…
Pinger affects fish catch efficiency and damage to bottom gill nets related to bottlenose dolphins
2009
There is some evidence that the presence of Tursiops truncatus in fishing areas represents a real economic threat to fishermen due the dolphin feeding on the entangled fish, damaging the nets and reducing the fish catch. We have carried out experiments to assess the efficiency of a pinger in decreasing the interaction between the dolphins and fishing nets, in a fishing area off the coast of southern Italy, where Tursiops truncatus is frequently observed to interact with bottom gill nets. Two identical monofilament bottom gill nets (900 m long), one equipped with pingers and the other without, were used to measure the effect of these pingers on the abundance of the catch and net damage. For …
Heavy metals in coastal water systems. A case study from the northwestern Gulf of Thailand.
2005
A geochemical survey of the northwestern part of the Thailand Gulf (Inner Gulf) was carried out in order to define concentrations and distribution patterns of selected heavy metals (V, Cr, Co, Ni, Cu, Zn, and U) in the coastal system and estuarine area of the Mae Klong river. The results indicate the presence of two different sources of heavy metals in the studied environment and allowed us to identify a lithogenic component that significantly influences the composition of coastal waters and suspended particulate matter (SPM). Comparison of the normalized heavy metals concentrations both in the studied samples and in those reported for the Sn–W ores present in the surrounding areas suggests…
Anthropogenic noise: the behavioural responses of Sparus aurata juveniles as the basis for a numerical model.
2019
Underwater noise is mainly produced by anthropogenic activities and has increased in recent years. The Marine Strategy Framework Directive aims to monitor “continuous low frequency sound” trends in ambient noise in particular at 1/3rd octave bands centered at 63 and 125 Hz. The aim of this work is to evaluate the possibility of using the results of Sparus aurata juvenile’s behavior for parameterizing a numerical model of the fish behavior. The fishes were stressed with white noise filtered with a band pass filter at 1/3 octave band centered respectively at 63 Hz, 125 Hz, 500 Hz, and 1 kHz (SPL: 140-150 dB re 1µPa). We performed three test replicas for the control (without any sound emission…
Maintenance of a Protein Structure in the Dynamic Evolution of TIMPs over 600 Million Years
2016
Deciphering the events leading to protein evolution represents a challenge, especially for protein families showing complex evolutionary history. Among them, TIMPs represent an ancient eukaryotic protein family widely distributed in the animal kingdom. They are known to control the turnover of the extracellular matrix and are considered to arise early during metazoan evolution, arguably tuning essential features of tissue and epithelial organization. To probe the structure and molecular evolution of TIMPs within metazoans, we report the mining and structural characterization of a large data set of TIMPs over approximately 600 Myr. The TIMPs repertoire was explored starting from the Cnidaria…
Effect of boat noise on the behaviour of bluefin tuna Thunnus thynnus in the Mediterranean Sea
2007
The effect of boat noise on the behaviour of bluefin tuna Thunnus thynnus was investi- gated in the Egadi Islands, Sicily, during spring 2005 using a fixed tuna trap set near shipping routes. Tuna behaviour was observed when exposed to both natural ambient sound and sound generated by hydrofoil passenger ferries, small boats and large car ferries. Acoustical and behavioural analyses were conducted with and without extraneous sound to define a list of behavioural categories. Each vessel produced different engine sounds with regard to their composition and bandwidth, and all were distinctly different from ambient sound levels. In the absence of boat noise, tuna assumed a con- centrated coordi…
Physiological and agonistic behavioural response of Procambarus clarkii to an acoustic stimulus
2012
Summary This study examined the effects of an acoustic stimulus on the haemolymph and agonistic behaviour of the red swamp crayfish Procambarus clarkii. The experiment was conducted in a tank equipped with a video recording system using 6 groups (3 control and 3 test groups) of five adult crayfish (30 specimens in total). After one hour of habituation, the behaviour of the crayfish was monitored for two hours. During the second hour, the animals in the test groups were exposed to a linear sweep (frequency range 0.1-25 kHz; peak amplitude 148 dBrms re 1 µPa at 12 kHz) acoustic stimulus for 30 minutes. Exposure to the noise produced significant variations in haemato-immunological parameters a…
The key role played by the Augusta basin (southern Italy) in the mercury contamination of the Mediterranean Sea.
2011
The Augusta basin, located in SE Sicily (southern Italy), is a semi-enclosed marine area, labelled as a highly contaminated site. The release of mercury into the harbour seawater and its dispersion to the blue water, make the Augusta basin a potential source of anthropogenic pollution for the Mediterranean Sea. A mass balance was implemented to calculate the HgT budget in the Augusta basin. Results suggest that an average of ∼0.073 kmol of HgT is released, by diffusion, on a yearly basis, from sediments to the seawater, with a consequent output of 0.162 kmol y(-1) to coastal and offshore waters; this makes the Augusta area an important contributor of mercury to the Mediterranean Sea. Owing …
Effects of acoustic stimulation on biochemical parameters in the digestive gland of Mediterranean mussel Mytilus galloprovincialis (Lamarck, 1819)
2020
Underwater sounds generated by anthropogenic activity can cause behavior changes, temporary loss of hearing, damage to parts of the body, or death in a number of marine organisms and can also affect healing and survival. In this study, the authors examined the effects of high-frequency acoustic stimulations on a number of biochemical parameters in the Mediterranean mussel, Mytilus galloprovincialis. During the experiment, animals were placed in a test tank and exposed to acoustic signals [a linear sweep ranging from 100 to 200 kHz and lasting 1 s, with a sound pressure level range of between 145 and 160 dBrms (re 1μParms)] for 3 h. Total haemocyte count was assessed and glucose levels, cyto…
Underwater noise from boats: Measurement of its influence on the behaviour and biochemistry of the common prawn (Palaemon serratus, Pennant 1777)
2016
Abstract This study examined the effects of recorded boat noises on the behaviour and biochemistry of the common prawn ( Palaemon serratus ) in laboratory settings. The experiment was carried out in a tank equipped with a video-recording system using six groups (three control and three tested) of eight common prawns (48 animals in total). After habituation for 1 h, the behaviour of the prawns was monitored for 1 h. During the last 30 min, the animals in the test groups were exposed to noise resembling a marine area with high anthropogenic acoustic pollution. The exposure to noise produced significant changes in locomotor patterns, presence inside or outside a shelter, total protein concentr…
Distribution and spatial structure of pelagic fish schools in relation to the nature of the seabed in the Sicily Channel (Central Mediterranean).
2009
Hydroacoustic data collected during two echosurveys carried out in the Sicily Channel in 1998 and 2002 were analysed to investigate the distribution and spatial structure of small pelagic fish species in relation to the sedimentological nature of the sea bottom. The study was carried out on two contiguous areas (labelled ZONE 1 and ZONE 2) of the continental shelf off the southern coast of Sicily, characterised by different dominant texture, ‘sand’ for ZONE 1 and ‘clayey-silt’ for ZONE 2. Simultaneous information on small pelagic fish schools and the seabed was obtained using a quantitative echo-sounder (SIMRAD EK500) that measures echoes due to the scattering from both fish schools and the…
The nucleic acid-binding protein PcCNBP is transcriptionally regulated during the immune response in red swamp crayfish Procambarus clarkii
2016
Gene family encoding cellular nucleic acid binding proteins (CNBP) is well conserved among vertebrates; however, there is limited knowledge in lower organisms. In this study, a CNBP homolog from the red swamp crayfish Procambarus clarkii was characterised. The full-length cDNA of PcCNBP was of 1257 bp with a 5′-untranslated region (UTR) of 63 bp and a 3′-UTR of 331 bp with a poly (A) tail, and an open-reading frame (ORF) of 864 bp encoding a polypeptide of 287 amino acids with the predicted molecular weight of about 33 kDa. The predicted protein possesses 7 tandem repeats of 14 amino acids containing the CCHC zinc finger consensus sequence, two RGG-rich single-stranded RNA-binding domain an…
Decoupled Acoustic and Visual Components in the Multimodal Signals of the Common Cuckoo (Cuculus canorus)
2021
Because of its parasitic habits, reproduction costs of the common cuckoo (Cuculus canorus) are mostly spent in pre-laying activities. Female costs are limited to searching host nests and laying eggs, whereas, males spend time in performing intense vocal displays, possibly with territorial purpose. This last aspect, together with a sexual plumage dimorphism, points to both intra- and inter-sexual selections operating within this species. One element triggering sexual selection is a differential fitness accrued by different phenotypes. Before analyzing possible sexual selection mechanisms operating in cuckoos, it is therefore necessary to verify whether there is a variability among male secon…
Artificial neural networks for fault tollerance of an air-pressure sensor network
2017
A meteorological tsunami, commonly called Meteotsunami, is a tsunami-like wave originated by rapid changes in barometric pressure that involve the displacement of a body of water. This phenomenon is usually present in the sea cost area of Mazara del Vallo (Sicily, Italy), in particular in the internal part of the seaport canal, sometimes making local population at risk. The Institute for Coastal Marine Environment (IAMC) of the National Research Council in Italy (CNR) have already conducted several studies upon meteotsunami phenomenon. One of the project has regarded the creation of a sensors network composed by micro-barometric sensors, located in 4 different stations close to the seaport …
Mediterranean circulation perturbations over the last five centuries: Relevance to past Eastern Mediterranean Transient-type events
2016
The Eastern Mediterranean Transient (EMT) occurred in the Aegean Sea from 1988 to 1995 and is the most significant intermediate-to-deep Mediterranean overturning perturbation reported by instrumental records. The EMT was likely caused by accumulation of high salinity waters in the Levantine and enhanced heat loss in the Aegean Sea, coupled with surface water freshening in the Sicily Channel. It is still unknown whether similar transients occurred in the past and, if so, what their forcing processes were. In this study, sediments from the Sicily Channel document surface water freshening (SCFR) at 1910 ± 12, 1812 ± 18, 1725 ± 25 and 1580 ± 30 CE. A regional ocean hindcast links SCFR to enhanc…