0000000000077424

AUTHOR

Alberto Pallavicini

0000-0001-7174-4603

showing 3 related works from this author

Isolation of seven polymorphic microsatellites in Ophioblennius atlanticus atlanticus (Perciformes, Blenniidae)

2005

We isolated and characterized seven polymorphic microsatellite loci of Ophioblennius atlanticus atlanticus (Valenciennes, 1836) using an optimized protocol to construct and screen a microsatellite-enriched genomic library. The analysis of variability was performed in 16 specimens from Faial Island (Azores, Portugal). The mean number of alleles was 8.71 ± ± ± 2.43 and the level of expected heterozygosity ranged from 0.764 to 0.903. The total exclusionary probabilities using these loci for the first and the second parent were 0.985 and 0.998, respectively, suggesting that these microsatellites are a useful tool for large-scale parentage analysis.

GeneticsEcologybiologyZoologybiology.organism_classificationBiochemistrySSRGeneral Biochemistry Genetics and Molecular BiologyPerciformesLoss of heterozygositySSR; POPULATION GENETICS; blennidaePolymorphic microsatellitesPOPULATION GENETICSOphioblennius atlanticusMicrosatelliteblennidae
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Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.

2000

Arabidopsis thaliana is an important model system for plant biologists. In 1996 an international collaboration (the Arabidopsis Genome Initiative) was formed to sequence the whole genome of Arabidopsis and in 1999 the sequence of the first two chromosomes was reported. The sequence of the last three chromosomes and an analysis of the whole genome are reported in this issue. Here we present the sequence of chromosome 3, organized into four sequence segments (contigs). The two largest (13.5 and 9.2 Mb) correspond to the top (long) and the bottom (short) arms of chromosome 3, and the two small contigs are located in the genetically defined centromere. This chromosome encodes 5,220 of the rough…

DNA PlantSequence analysisArabidopsisplantGenomeComplete sequenceArabidopsisGene DuplicationCentromerePlant genomics; model organismHumansgenomic structureGenemodel organismPlant ProteinsGeneticsMultidisciplinarybiologyChromosomeChromosome MappingSequence Analysis DNAbiology.organism_classificationPlant genomicsgenome sequencingChromosome 3plant; genome sequencing; genomic structureGenome Plant
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Toll signal transduction pathway in bivalves: Complete cds of intermediate elements and related gene transcription levels in hemocytes of immune stim…

2014

Based on protein domain structure and organization deduced from mRNA contigs, 15 transcripts of the Toll signaling pathway have been identified in the bivalve, Mytilus galloprovincialis. Identical searches performed on publicly available Mytilus edulis ESTs revealed 11 transcripts, whereas searches performed in genomic and new transcriptome sequences of the Pacific oyster, Crassostrea gigas, identified 21 Toll-related transcripts. The remarkable molecular diversity of TRAF and IKK coding sequences of C. gigas, suggests that the sequence data inferred from Mytilus cDNAs may not be exhaustive. Most of the Toll pathway genes were constitutively and ubiquitously expressed in M. galloprovinciali…

animal structuresMolluskToll signaling pathwayInnate immunity; Mollusks; Mytilus; Signal transduction; Toll pathway; NF-κBImmunologyProtein domainSettore BIO/05 - ZoologiaMytiluSignal transductionNF-κBTranscriptomeTranscription (biology)Animals[SDU.STU.HY]Sciences of the Universe [physics]/Earth Sciences/HydrologyGenePhylogenyComputingMilieux_MISCELLANEOUSMytilusInnate immunityMessenger RNAInnate immune systemMollusksToll-like receptors; signal transduction; Mytilus-galloprovincialis Lmk (bivalvia)biologyEcologyfungiMytilus-galloprovincialis Lmk (bivalvia)biology.organism_classificationMytilusToll-like receptorsCell biologyInnate immunity; Mollusks; Mytilus; NF-κB; Signal transduction; Toll pathwayToll pathwayNF-jBDevelopmental Biology
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