0000000000116808

AUTHOR

Aharon Oren

showing 9 related works from this author

Emendation of Rules 5b, 8, 15 and 22 of the International Code of Nomenclature of Prokaryotes to include the rank of phylum.

2021

Following the International Committee on Systematics of Prokaryotes electronic discussion and vote on proposals to include the rank of phylum in the rules of the International Code of Nomenclature of Prokaryotes, we here announce the results of the ballot. We also present draft versions of the emended Rules 5b, 8, 15 and 22, based on the outcome of the ballot, to be included in the proposal for the preparation of a new revision of the International Code of Nomenclature of Prokaryotes.

0106 biological sciences0301 basic medicineInformation retrievalPhylumRank (computer programming)General MedicineC500Biology010603 evolutionary biology01 natural sciencesMicrobiologyInternational code03 medical and health sciences030104 developmental biologyBallotProkaryotic CellsTerminology as TopicNomenclatureEcology Evolution Behavior and SystematicsPhylogenyInternational journal of systematic and evolutionary microbiology
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Preparing a revision of the International Code of Nomenclature of Prokaryotes

2020

The Editorial Board of the International Code of Nomenclature of Prokaryotes here explains the proposed procedure towards the production of the next revision of the Prokaryotic Code, to include public discussion of a draft version, to be prepared by the editors, followed by balloting of the members of the International Committee on Systematics of Prokaryotes.

0106 biological sciences0301 basic medicineLibrary scienceGeneral MedicineEditorial boardBiology010603 evolutionary biology01 natural sciencesMicrobiologyCode (semiotics)Prokaryotic CodeInternational code03 medical and health sciencesICNP030104 developmental biologyPublic discussionICSPNomenclatureEcology Evolution Behavior and Systematics
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Emendation of General Consideration 5 and Rules 18a, 24a and 30 of the International Code of Nomenclature of Prokaryotes to resolve the status of the…

2021

Following the International Committee on Systematics of Prokaryotes electronic discussion and vote on proposals to resolve the status of the Cyanobacteria in the prokaryotic nomenclature, we announce here the results of the ballot. We also present the emended versions of General Consideration 5 and Rules 18a, 24a and 30, based on the outcome of the ballot, to be included in the new revision of the International Code of Nomenclature of Prokaryotes.

International codeSystematicsBallotGeneral MedicineBiologyMicrobiologyNomenclatureEcology Evolution Behavior and SystematicsGenealogyInternational Journal of Systematic and Evolutionary Microbiology
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Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes

2018

Advancement of DNA sequencing technology allows the routine use of genome sequences in the various fields of microbiology. The information held in genome sequences proved to provide objective and reliable means in the taxonomy of prokaryotes. Here, we describe the minimal standards for the quality of genome sequences and how they can be applied for taxonomic purposes.

0301 basic medicineWhole genome sequencing030106 microbiologyPhylogenomicsGeneral MedicineComputational biologyGenomicsSequence Analysis DNAMinimal standardsAverage nucleotide identityBiologyMicrobiologyGenomeDNA sequencing03 medical and health sciencesProkaryotic CellsPhylogenomicsTerminology as TopicGenome sequenceTaxonomy (biology)Prokaryotic taxonomyEcology Evolution Behavior and SystematicsPhylogeny
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NaCl-saturated brines are thermodynamically moderate, rather than extreme, microbial habitats

2018

NaCl-saturated brines such as saltern crystalliser ponds, inland salt lakes, deep-sea brines and liquids-of-deliquescence on halite are commonly regarded as a paradigm for the limit of life on Earth. There are, however, other habitats that are thermodynamically more extreme. Typically, NaCl-saturated environments contain all domains of life and perform complete biogeochemical cycling. Despite their reduced water activity, ∼0.755 at 5 M NaCl, some halophiles belonging to the Archaea and Bacteria exhibit optimum growth/metabolism in these brines. Furthermore, the recognised water-activity limit for microbial function, ∼0.585 for some strains of fungi, lies far below 0.755. Other biophysical c…

0301 basic medicineBiogeochemical cycleWater activity030106 microbiologySodium Chlorideengineering.materialBacterial Physiological PhenomenaMicrobiology03 medical and health sciencesEcosystemEcosystemBacteriabiologyBiospherebiology.organism_classificationArchaeaHalophile030104 developmental biologyInfectious DiseasesEnvironmental chemistryengineeringDunaliella salinaThermodynamicsHaliteSaltsWater MicrobiologyArchaeaFEMS Microbiology Reviews
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Recommended minimal standards for describing new taxa of the family Halomonadaceae

2007

Following Recommendation 30b of the Bacteriological Code (1990 Revision), a proposal of minimal standards for describing new taxa within the family Halomonadaceae is presented. An effort has been made to evaluate as many different approaches as possible, not only the most conventional ones, to ensure that a rich polyphasic characterization is given. Comments are given on the advantages of each particular technique. The minimal standards are considered as guidelines for authors to prepare descriptions of novel taxa. The proposals presented here have been endorsed by the International Committee on Systematics of Prokaryotes Subcommittee on the Taxonomy of Halomonadaceae.

SystematicsBacteriological TechniquesbiologyManagement scienceEcologyGeneral MedicineClassificationbiology.organism_classificationMicrobiologyFamily HalomonadaceaeHalomonadaceaeHalomonadaceaeTaxonMolecular BiologyEcology Evolution Behavior and SystematicsInternational Journal of Systematic and Evolutionary Microbiology
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Public discussion on a proposed revision of the International Code of Nomenclature of Prokaryotes

2021

The Editorial Board for the International Code of Nomenclature of Prokaryotes (ICNP) has compiled proposed revisions of the ICNP. As outlined previously (Oren et al., Int J Syst Evol Microbiol 2021;71:004598; https://doi.org/10.1099/ijsem.0.004598) and to comply with Articles 13(b)(4) and 4(d) of the statutes of the International Committee on Systematics of Prokaryotes, a public discussion of the document will start on 1 July 2021, to last for 6 months. Here, we present the procedure for this discussion.

0106 biological sciences0301 basic medicineEcology (disciplines)C100Library scienceInternational Committee on Systematics of ProkaryotesGeneral MedicineEditorial boardC500BiologyInternational Code of Nomenclature of ProkaryotesClassification010603 evolutionary biology01 natural sciencesMicrobiologyProkaryotic CodeInternational codeStatute03 medical and health sciences030104 developmental biologyPublic discussionProkaryotic CellsTerminology as TopicNomenclatureEcology Evolution Behavior and Systematics
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Emended descriptions of genera of the family Halobacteriaceae.

2009

The family Halobacteriaceae currently contains 96 species whose names have been validly published, classified in 27 genera (as of September 2008). In recent years, many novel species have been added to the established genera but, in many cases, one or more properties of the novel species do not agree with the published descriptions of the genera. Authors have often failed to provide emended genus descriptions when necessary. Following discussions of the International Committee on Systematics of Prokaryotes Subcommittee on the Taxonomy of Halobacteriaceae, we here propose emended descriptions of the genera Halobacterium, Haloarcula, Halococcus, Haloferax, Halorubrum, Haloterrigena, Natrialba…

HalobiformaBase CompositionHalobacteriaceaebiologyNatronorubrumGeneral Medicinebiology.organism_classificationMicrobiologyHalococcusDNA RibosomalLipidsHaloterrigenaHaloarculaDNA ArchaealPhenotypeSpecies SpecificityEvolutionary biologyNatrialbaRNA Ribosomal 16SBotanyHalorubrumHaloferaxEcology Evolution Behavior and SystematicsPhylogenyInternational journal of systematic and evolutionary microbiology
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International Committee on Systematics of Prokaryotes Subcommittee on the taxonomy of Halobacteria and Subcommittee on the taxonomy of Halomonadaceae…

2017

SystematicsHalomonadaceaeLibrary scienceTaxonomy (biology)General MedicineBiologybiology.organism_classificationMicrobiologyCorrigendaEcology Evolution Behavior and SystematicsInternational journal of systematic and evolutionary microbiology
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