6533b7dcfe1ef96bd127297b

RESEARCH PRODUCT

Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes

Martha E. TrujilloHana YiAlejandro P. RooneyJongsik ChunXue-wei XuDavid R. ArahalMilton S. Da CostaSofie E. De MeyerAharon OrenHenrik ChristensenAntonio Ventosa

subject

0301 basic medicineWhole genome sequencing030106 microbiologyPhylogenomicsGeneral MedicineComputational biologyGenomicsSequence Analysis DNAMinimal standardsAverage nucleotide identityBiologyMicrobiologyGenomeDNA sequencing03 medical and health sciencesProkaryotic CellsPhylogenomicsTerminology as TopicGenome sequenceTaxonomy (biology)Prokaryotic taxonomyEcology Evolution Behavior and SystematicsPhylogeny

description

Advancement of DNA sequencing technology allows the routine use of genome sequences in the various fields of microbiology. The information held in genome sequences proved to provide objective and reliable means in the taxonomy of prokaryotes. Here, we describe the minimal standards for the quality of genome sequences and how they can be applied for taxonomic purposes.