0000000000122062

AUTHOR

Inese Strazdina

showing 12 related works from this author

The inefficient aerobic energetics ofZymomonas mobilis: Identifying the bottleneck

2014

To investigate the mechanisms of Zymomonas mobilis uncoupled aerobic metabolism, growth properties of the wild-type strain Zm6 were compared to those of its respiratory mutants cytB and cydB, and the effects of the ATPase inhibitor DCCD on growth and intracellular ATP concentration were studied. The effects of the ATPase inhibitor DCCD on growth and intracellular ATP concentration strongly indicated that the apparent lack of oxidative phosphorylation in aerobically growing Z. mobilis culture might be caused by the ATP hydrolyzing activity of the H(+) -dependent ATPase in all analyzed strains. Aerobic growth yields of the mutants, and their capacity of oxidative ATP synthesis with ethanol we…

ATP synthasebiologyCellular respirationATPaseGeneral MedicineOxidative phosphorylationbiology.organism_classificationApplied Microbiology and BiotechnologyZymomonas mobilisElectron transport chainBiochemistrybiology.proteinPhosphorylationIntracellularJournal of Basic Microbiology
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NADH dehydrogenase deficiency results in low respiration rate and improved aerobic growth of Zymomonas mobilis.

2008

The respiratory chain of the ethanol-producing bacterium Zymomonas mobilis is able to oxidize both species of nicotinamide cofactors, NADH and NADPH. A mutant strain with a chloramphenicol-resistance determinant inserted in ndh (encoding an NADH : CoQ oxidoreductase of type II) lacked the membrane NADH and NADPH oxidase activities, while its respiratory d-lactate oxidase activity was increased. Cells of the mutant strain showed a very low respiration rate with glucose and no respiration with ethanol. The aerobic growth rate of the mutant was elevated; exponential growth persisted longer, resulting in higher biomass densities. For the parent strain a similar effect of aerobic growth stimulat…

Respiratory chainDehydrogenaseAcetaldehydeMicrobiologyZymomonas mobilisMixed Function Oxygenaseschemistry.chemical_compoundBacterial ProteinsOxidoreductaseRespirationBiomasschemistry.chemical_classificationOxidase testZymomonasbiologyEthanolCell MembraneAcetaldehydeNADH Dehydrogenasebiology.organism_classificationNADAerobiosisOxygenMutagenesis InsertionalGlucosechemistryBiochemistryRespiration rateOxidation-ReductionGene DeletionNADPMicrobiology (Reading, England)
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Respiratory type II NAD(P)H dehydrogenase of Zymomonas mobilis with altered cofactor specificity

2014

NAD(P)H dehydrogenasebiologyBiochemistryChemistryBiophysicsbiology.proteinCell BiologyRespiratory systembiology.organism_classificationBiochemistryZymomonas mobilisCofactorBiochimica et Biophysica Acta (BBA) - Bioenergetics
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Syntrophy of Crypthecodinium cohnii and immobilized Zymomonas mobilis for docosahexaenoic acid production from sucrose-containing substrates

2021

Marine heterotrophic dinoflagellate Crypthecodinium cohnii is an aerobic oleaginous microorganism that accumulates intracellular lipid with high content of 4,7,10,13,16,19-docosahexaenoic acid (DHA), a polyunsaturated ω-3 (22:6) fatty acid with multiple health benefits. C. cohnii can grow on glucose and ethanol, but not on sucrose or fructose. For conversion of sucrose-containing renewables to C. cohnii DHA, we investigated a syntrophic process, involving immobilized cells of ethanologenic bacterium Zymomonas mobilis for fermenting sucrose to ethanol. The non-respiring, NADH dehydrogenase-deficient Z. mobilis strain Zm6-ndh, with high ethanol yield both under anaerobic and aerobic condition…

chemistry.chemical_classificationSucroseZymomonasSucroseDocosahexaenoic AcidsbiologyFatty acidLevansucraseBioengineeringFructoseGeneral MedicineCrypthecodinium cohniibiology.organism_classificationApplied Microbiology and BiotechnologyZymomonas mobilischemistry.chemical_compoundchemistrySyntrophyFermentationDinoflagellidaFermentationFood scienceBiotechnologyJournal of Biotechnology
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Structure of the Zymomonas mobilis respiratory chain: oxygen affinity of electron transport and the role of cytochrome c peroxidase

2014

The genome of the ethanol-producing bacterium Zymomonas mobilis encodes a bd-type terminal oxidase, cytochrome bc 1 complex and several c-type cytochromes, yet lacks sequences homologous to any of the known bacterial cytochrome c oxidase genes. Recently, it was suggested that a putative respiratory cytochrome c peroxidase, receiving electrons from the cytochrome bc 1 complex via cytochrome c 552, might function as a peroxidase and/or an alternative oxidase. The present study was designed to test this hypothesis, by construction of a cytochrome c peroxidase mutant (Zm6-perC), and comparison of its properties with those of a mutant defective in the cytochrome b subunit of the bc 1 complex (Zm…

ZymomonasbiologyCytochrome bc1Cytochrome c peroxidaseCytochrome cCytochrome dCytochrome-c PeroxidaseMicrobiologyMolecular biologyStandardElectron TransportOxygenBiochemistryCytochrome C1Coenzyme Q – cytochrome c reductasebiology.proteinCytochrome c oxidaseOxidoreductasesPhysiology and BiochemistryGene DeletionPeroxidaseMicrobiology
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Hydrogen-producingEscherichia colistrains overexpressing lactose permease: FT-IR analysis of the lactose-induced stress

2014

The lactose permease gene (lacY) was overexpressed in the septuple knockout mutant of Escherichia coli, previously engineered for hydrogen production from glucose. It was expected that raising the lactose transporter activity would elevate the intracellular lactose concentration, inactivate the lactose repressor, induce the lactose operon, and as a result stimulate overall lactose consumption and conversion. However, overexpression of the lactose transporter caused a considerable growth delay in the recombinant strain on lactose, resembling to some extent the "lactose killing" phenomenon. Therefore, the recombinant strain was subjected to selection on lactose-containing media. Selection on …

Lactose permeasebiologyProcess Chemistry and TechnologyMutantBiomedical Engineeringlac operonBioengineeringGeneral MedicineLac repressormedicine.disease_causeApplied Microbiology and Biotechnologylaw.inventionchemistry.chemical_compoundBiochemistrychemistrylawDrug DiscoverymedicineRecombinant DNAAlpha-lactalbuminbiology.proteinMolecular MedicineLactoseEscherichia coliBiotechnologyBiotechnology and Applied Biochemistry
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Translocation of Zymomonas mobilis pyruvate decarboxylase to periplasmic compartment for production of acetaldehyde outside the cytosol

2019

Abstract Acetaldehyde, a valuable commodity chemical, is a volatile inhibitory byproduct of aerobic fermentation in Zymomonas mobilis and in several other microorganisms. Attempting to improve acetaldehyde production by minimizing its contact with the cell interior and facilitating its removal from the culture, we engineered a Z. mobilis strain with acetaldehyde synthesis reaction localized in periplasm. For that, the pyruvate decarboxylase (PDC) was transferred from the cell interior to the periplasmic compartment. This was achieved by the construction of a Z. mobilis Zm6 PDC‐deficient mutant, fusion of PDC with the periplasmic signal sequence of Z. mobilis gluconolactonase, and the follow…

Recombinant Fusion Proteinslcsh:QR1-502macromolecular substancesAcetaldehydeMicrobiologyZymomonas mobilislcsh:Microbiologychemistry.chemical_compoundperiplasmZymomonasbiologypyruvate decarboxylaseZymomonas mobilisAcetaldehydeacetaldehyde productionhemic and immune systemsPeriplasmic spaceCompartment (chemistry)Original Articlesbiology.organism_classificationFusion proteinAerobiosisProtein TransportBiochemistrychemistryMetabolic EngineeringFermentationGluconolactonaseFermentationOriginal ArticlePyruvate decarboxylaseMicrobiologyOpen
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Effect of ADH II Deficiency on the Intracellular Redox Homeostasis in Zymomonas mobilis

2011

Mutant strain of the facultatively anaerobic, ethanol-producing bacteriumZymomonas mobilis, deficient in the Fe-containing alcohol dehydrogenase isoenzyme (ADH II), showed impaired homeostasis of the intracellular NAD(P)H during transition from anaerobic to aerobic conditions, and also in steady-state continuous cultures at various oxygen supplies. At the same time, ADH II deficiency in aerobically grown cells was accompanied by a threefold increase of catalase activity and by about 50% increase of hydrogen peroxide excretion. It is concluded that ADH II under aerobic conditions functions to maintain intracellular redox homeostasis and to protect the cells from endogenous hydrogen peroxide.

Article Subjectlcsh:MedicineBiologyZymomonas mobilislcsh:TechnologyGeneral Biochemistry Genetics and Molecular Biologychemistry.chemical_compoundOxygen ConsumptionSpecies SpecificityHomeostasisHydrogen peroxidelcsh:ScienceGeneral Environmental ScienceAlcohol dehydrogenaseZymomonaslcsh:Tlcsh:RAlcohol DehydrogenaseHydrogen PeroxideGeneral Medicinebiology.organism_classificationOxygenBiochemistrychemistryCatalasebiology.proteinlcsh:QNAD+ kinaseOxidation-ReductionAnaerobic exerciseNADPHomeostasisIntracellularResearch ArticleThe Scientific World Journal
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The Low Energy-Coupling Respiration in Zymomonas mobilis Accelerates Flux in the Entner-Doudoroff Pathway.

2015

Performing oxidative phosphorylation is the primary role of respiratory chain both in bacteria and eukaryotes. Yet, the branched respiratory chains of prokaryotes contain alternative, low energy-coupling electron pathways, which serve for functions other than oxidative ATP generation (like those of respiratory protection, adaptation to low-oxygen media, redox balancing, etc.), some of which are still poorly understood. We here demonstrate that withdrawal of reducing equivalents by the energetically uncoupled respiratory chain of the bacterium Zymomonas mobilis accelerates its fermentative catabolism, increasing the glucose consumption rate. This is in contrast to what has been observed in o…

Metabolic Processes0301 basic medicineRespiratory chainlcsh:MedicineBiochemistryOxidative PhosphorylationGlucose Metabolismlcsh:ScienceZymomonasMultidisciplinarybiologyOrganic CompoundsSimulation and ModelingMonosaccharidesChemical ReactionsCatabolismAerobiosisEnzymesChemistryBiochemistryPhysical SciencesCarbohydrate MetabolismOxidoreductasesOxidation-ReductionResearch Article030106 microbiologyCarbohydratesAcetaldehydeOxidative phosphorylationResearch and Analysis MethodsZymomonas mobilisElectron Transport03 medical and health sciencesOxidationEntner–Doudoroff pathwayDehydrogenasesOrganic Chemistrylcsh:RChemical CompoundsBiology and Life SciencesProteinsNADbiology.organism_classificationElectron transport chainKineticsGlucoseMetabolismFermentationEnzymologyFermentationlcsh:QFlux (metabolism)BacteriaPLoS ONE
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High aerobic growth with low respiratory rate: The ndh-deficient Zymomonas mobilis

2007

biologyChemistryAerobic growthLow respiratory rateBioengineeringGeneral Medicinebiology.organism_classificationApplied Microbiology and BiotechnologyZymomonas mobilisBiotechnologyMicrobiologyJournal of Biotechnology
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Improvement of acetaldehyde production in Zymomonas mobilis by engineering of Its aerobic metabolism

2019

Acetaldehyde is a valuable product of microbial biosynthesis, which can be used by the chemical industry as the entry point for production of various commodity chemicals. In ethanologenic microorganisms, like yeast or the bacterium Zymomonas mobilis, this compound is the immediate metabolic precursor of ethanol. In aerobic cultures of Z. mobilis, it accumulates as a volatile, inhibitory byproduct, due to the withdrawal of reducing equivalents from the alcohol dehydrogenase reaction by respiration. The active respiratory chain of Z. mobilis with its low energy-coupling efficiency is well-suited for regeneration of NAD+ under conditions when acetaldehyde, but not ethanol, is the desired catab…

Microbiology (medical)Cellular respirationlcsh:QR1-502Respiratory chainZymomonas mobilisMicrobiologylcsh:MicrobiologyMetabolic engineering03 medical and health scienceschemistry.chemical_compoundstoichiometric model030304 developmental biologyAlcohol dehydrogenaseOriginal Research2. Zero hunger0303 health sciencesEthanolbiology030306 microbiologyZymomonas mobilisNADH dehydrogenaseAcetaldehydebiology.organism_classificationmetabolomicschemistryBiochemistrybiology.proteinmetabolic engineeringacetaldehyde
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Aerobic catabolism and respiratory lactate bypass in Ndh-negative Zymomonas mobilis

2018

Ability to ferment in the presence of oxygen increases the robustness of bioprocesses and opens opportunity for novel industrial setups. The ethanologenic bacterium Zymomonas mobilis performs rapid and efficient anaerobic ethanol fermentation, yet its respiratory NADH dehydrogenase (Ndh)-deficient strain (ndh-) is known to produce ethanol with high yield also under oxic conditions. Compared to the wild type, it has a lower rate of oxygen consumption, and an increased expression of the respiratory lactate dehydrogenase (Ldh). Here we present a quantitative study of the product spectrum and carbon balance for aerobically growing ndh-. Ldh-deficient and Ldh-overexpressing ndh- strains were con…

0301 basic medicinelcsh:BiotechnologyEndocrinology Diabetes and Metabolism030106 microbiologyBiomedical EngineeringRespiratory chainBioethanolEthanol fermentationZymomonas mobilisArticle03 medical and health scienceschemistry.chemical_compoundlcsh:TP248.13-248.65Lactate dehydrogenaselcsh:QH301-705.5biologyCatabolismZymomonas mobilisNADH dehydrogenaseLactate dehydrogenaseNADH dehydrogenaseMetabolismRespiratory chainbiology.organism_classificationlcsh:Biology (General)chemistryBiochemistryOxidative stressbiology.proteinAnaerobic exerciseMetabolic Engineering Communications
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