European Vegetation Archive (EVA): an integrated database of European vegetation plots
Biurrun, Idoia/0000-0002-1454-0433; Rojo, Maria Pilar Rodriguez/0000-0001-5449-9386; Ermakov, Nikolai/0000-0001-7550-990X; De Sanctis, Michele/0000-0002-7280-6199; Svenning, Jens-Christian/0000-0002-3415-0862; Virtanen, Risto/0000-0002-8295-8217; Agrillo, Emiliano/0000-0003-2346-8346; Onyshchenko, Viktor/0000-0001-9079-7241; Marceno, Corrado/0000-0003-4361-5200; Willner, Wolfgang/0000-0003-1591-8386; Fernandez-Gonzalez, Federico/0000-0003-1234-4065; Jansen, Florian/0000-0002-0331-5185; Swacha, Grzegorz/0000-0002-6380-2954; Dengler, Jurgen/0000-0003-3221-660X; Guarino, Riccardo/0000-0003-0106-9416; Sopotlieva, Desislava/0000-0002-9281-7039; Venanzoni, Roberto/0000-0002-7768-0468; Chytry, Mil…
Benchmarking plant diversity of Palaearctic grasslands and other open habitats
© 2021 The Authors.
Facebook groups as citizen science tools for plant species monitoring
I social network sono canali di comunicazione utilizzati per condividere enormi quantità di dati, che possono essere utilizzati per la ricerca scientifica, anche nel campo della biodiversità. Per sapere quanto i dati ricavati dai social network possono integrare quelli raccolti per scopi scientifici, è necessario individuarne i bias. Utilizzando i dati estratti da un gruppo Facebook specializzato nella flora vascolare siciliana, abbiamo analizzato quali sono i caratteri che aumentano la probabilità che una pianta spontanea venga fotografata e postata su un social network. A tal fine, abbiamo confrontato frequenze e attributi delle specie fotografate dai membri del gruppo Facebook con quelli…
Distribution maps of vegetation alliances in Europe
Aim The first comprehensive checklist of European phytosociological alliances, orders and classes (EuroVegChecklist) was published by Mucina et al. (2016, Applied Vegetation Science, 19 (Suppl. 1), 3-264). However, this checklist did not contain detailed information on the distribution of individual vegetation types. Here we provide the first maps of all alliances in Europe. Location Europe, Greenland, Canary Islands, Madeira, Azores, Cyprus and the Caucasus countries. Methods We collected data on the occurrence of phytosociological alliances in European countries and regions from literature and vegetation-plot databases. We interpreted and complemented these data using the expert knowledge…
Conservation genetics of an endemic from the Mediterranean Basin: high genetic differentiation but no genetic diversity loss from the last populations of the Sicilian Grape Hyacinth Leopoldia gussonei
The Mediterranean Basin is a biodiversity hotspot, housing > 11.000 narrowly endemic plant species, many of which are declining due to mass tourism and agricultural intensification. To investigate the genetic resource impacts of ongoing habitat loss and degradation, we characterized the genetic variation in the last known populations of Leopoldia gussonei, a self-compatible endangered Sicilian Grape Hyacinth numbering less than 3,000 remaining individuals, using AFLP. Results demonstrated significant genome-wide genetic differentiation among all extant populations (I broken vertical bar(ST) = 0.05-0.56), and genetic clustering according to geographic location. Gene diversity was fairly c…
Fine‐grain beta diversity of Palaearctic grassland vegetation
QUESTIONS: Which environmental factors influence fine-grain beta diversity of vegetation and do they vary among taxonomic groups? LOCATION: Palaearctic biogeographic realm. METHODS: We extracted 4,654 nested-plot series with at least four different grain sizes between 0.0001 m² and 1,024 m² from the GrassPlot database, covering a wide range of different grassland and other open habitat types. We derived extensive environmental and structural information for these series. For each series and four taxonomic groups (vascular plants, bryophytes, lichens, all), we calculated the slope parameter (z-value) of the power law species–area relationship (SAR), as a beta diversity measure. We tested whe…
Finite Mixture Model-based classification of a complex vegetation system
Aim: To propose a Finite Mixture Model (FMM) as an additional approach for classifying large datasets of georeferenced vegetation plots from complex vegetation systems. Study area: The Italian peninsula including the two main islands (Sicily and Sardinia), but excluding the Alps and the Po plain. Methods: We used a database of 5,593 georeferenced plots and 1,586 vascular species of forest vegetation, created in TURBOVEG by storing published and unpublished phytosociological plots collected over the last 30 years. The plots were classified according to species composition and environmental variables using a FMM. Classification results were compared with those obtained by TWINSPAN algorithm. …
Plant hunting: exploring the behaviour of amateur botanists in the field
We asked what are the behavioural and logistic preferences of professional and amateur botanists when exploring flora in the field. We extracted temporal and spatial data on vas- cular plant species occurrences from three datasets of Sicilian flora: a subset of iNaturalist, a dataset collected by a Facebook group focused on the flora of Sicily and a subset of the professional database European Vegetation Archive. We used the time span of individual contributor’s activity as a proxy of their commitment to collecting information about the flora of Sicily. Climate and landscape data were used to better characterize the spatial and temporal activity of data contributors. Finally, we assessed wh…
A formal classification of the Lygeum spartum vegetation of the Mediterranean Region
Aims: We examined all available literature and some unpublished data on the We examined all available literature and some unpublished data on the grasslands dominated by Lygeum spartum from Southern Europe and North Africa to produce a formalised classification of this vegetation and to identify the main factors determining its plant species composition. Location: Mediterranean Basin and Iberian Peninsula. Methods: We used a dataset of 728 releves, which were resampled to reduce unbalanced sampling effort, resulting in a dataset of 568 releves and 846 taxa. We classified the plots by TWINSPAN, interpreted the resulting pools, and used them to develop formal definitions of phytosociological …
A test on Ellenberg indicator values in the Mediterranean evergreen woods (Quercetea ilicis)
The consistency and reliability of Ellenberg’s indicator values (Eiv) as ecological descriptors of the Mediterranean evergreen vegetation ascribed to the phytosociological class Quercetea ilicis have been checked on a set of 859 phytosociological releves × 699 species. Diagnostic species were identified through a Twinspan analysis and their Eiv analyzed and related to the following independent variables: (1) annual mean temperatures, (2) annual rainfall. The results provided interesting insights to disentangle the current syntaxonomical framework at the alliance level demonstrating the usefulness of ecological indicator values to test the efficiency and predictivity of the phytosociological…
GrassPlot v. 2.00 : first update on the database of multi-scale plant diversity in Palaearctic grasslands
Abstract: GrassPlot is a collaborative vegetation-plot database organised by the Eurasian Dry Grassland Group (EDGG) and listed in the Global Index of Vegetation-Plot Databases (GIVD ID EU-00-003). Following a previous Long Database Report (Dengler et al. 2018, Phyto- coenologia 48, 331–347), we provide here the first update on content and functionality of GrassPlot. The current version (GrassPlot v. 2.00) contains a total of 190,673 plots of different grain sizes across 28,171 independent plots, with 4,654 nested-plot series including at least four grain sizes. The database has improved its content as well as its functionality, including addition and harmonization of header data (land use,…
Assessing sampling coverage of species distribution in biodiversity databases
Abstract Aim Biodiversity databases are valuable resources for understanding plant species distributions and dynamics, but they may insufficiently represent the actual geographic distribution and climatic niches of species. Here we propose and test a method to assess sampling coverage of species distribution in biodiversity databases in geographic and climatic space. Location Europe. Methods Using a test selection of 808,794 vegetation plots from the European Vegetation Archive (EVA), we assessed the sampling coverage of 564 European vascular plant species across both their geographic ranges and realized climatic niches. Range maps from the Chorological Database Halle (CDH) were used as bac…
Reciprocal extrapolation of species distribution models between two islands – Specialists perform better than generalists and geological data reduces prediction accuracy
Abstract This study aims to test the extrapolation effects of species distribution models (SDM) using three groups of predictor variables: climate, relief and geology (bedrock type). We highlight potential ecological differences for selected taxa, regarding both generalists and specialists in terms of edaphic conditions. We used distributional data of 12 woody species shared by two large Mediterranean islands (Crete and Sicily) to calibrate Maxent models of their potential distribution. We trained models with data from Crete and extrapolated to Sicily and vice versa. We tested ten proxies for the three variable groups and compared AUC values as a measure of model performance. Extrapolation …
Thirty years unmanaged green roofs: Ecological research and design implications
Abstract The variations in species composition and assemblage of unmanaged simple-intensive green roofs in Hannover, Germany, were investigated over a thirty year period, in order to assess the persistence of the initial seed mixture and to evaluate floristic changes. The roofs were greened in 1985 with soil-based turf rolls sown with a mixture of five grasses (Festuca rubra, Festuca ovina, Agrostis capillaris, Lolium perenne and Poa pratensis). Three sets of 120 phytosociological releves, sampled in 1987, 1999 and 2014, have been compared to assess: (1) nestedness vs spatial turnover, (2) functional diversity and (3) the importance of vegetation dynamics on green roof performance and desig…
Life‐form diversity across temperate deciduous forests of Western Eurasia: A different story in the understory
[Aim]To analyse the biogeographic patterns of Temperate Deciduous Forests (TDFs) in Western Eurasia based on different life-forms and forests layers and explore their relationships with the current climate, Last Glacial Maximum (LGM) climate and topography.
Shedding light on typical species: Implications for habitat monitoring
Habitat monitoring in Europe is regulated by Article 17 of the Habitats Directive, which suggests the use of typical species to assess habitat conservation status. Yet, the Directive uses the term “typical” species but does not provide a definition, either for its use in reporting or for its use in impact assessments. To address the issue, an online workshop was organized by the Italian Society for Vegetation Science (SISV) to shed light on the diversity of perspectives regarding the different concepts of typical species, and to discuss the possible implications for habitat monitoring. To this aim, we inquired 73 people with a very different degree of expertise in the field of veget…
Conservation of Ptilostemon greuteri (Asteraceae), an endemic climate relict from Sicily (Italy): state of knowledge after the discovery of a second population
Ptilostemon greuteri is one of the most endangered and poorly studied woody vascular plant species of the Mediterranean Basin, endemic to Sicily (Italy). Several peculiar traits confer to P. greuteri a character of uniqueness and an enigmatic attractiveness. In fact, at first glimpse the largest individuals of this species remind the most remarkable and peculiar cases of herbaceous genera (e.g., Echium, Senecio) turned woody on insular or insular-like mountain ecosystems. Following the discovery of a second population of this rare species, a project aiming at the study and conservation of P. greuteri was set up. We present here updated information on the distribution, conservation status, b…
Testing macroecological abundance patterns:the relationship between local abundance and range size, range position and climatic suitability among European vascular plants
Aim A fundamental question in macroecology centres around understanding the relationship between species' local abundance and their distribution in geographical and climatic space (i.e. the multi-dimensional climatic space or climatic niche). Here, we tested three macroecological hypotheses that link local abundance to the following range properties: (a) the abundance-range size relationship, (b) the abundance-range centre relationship and (c) the abundance-suitability relationship. Location Europe. Taxon Vascular plants. Methods Distribution range maps were extracted from the Chorological Database Halle to derive information on the range and niche sizes of 517 European vascular plant speci…
Regional metacommunities in two coastal systems: spatial structure and drivers of plant assemblages
Aim Biogeographical patterns in metacommunities are still poorly understood, and different processes are expected to occur in different habitats. We analysed the regional plant metacommunities of coastal habitats to test whether (1) the influence of space and climate differs between two habitats differentiated along the seashore–inland gradient, and (2) regional variation in species composition of these habitats can be ascribed to different metacommunity paradigms. Location The entire coast of the Iberian Peninsula, south-western Europe. Methods We collected data on the plant species composition of coastal sites on sand dunes across 3000 km of coastline. The sites were classified into two h…
Alien plant invasions in Mediterranean habitats: an assessment for Sicily
AbstractLevels of plant invasions in different habitat types were assessed in several regional studies, but few of them were from the Mediterranean. Here we compare the levels of vascular plant invasion across habitats and plant communities of Sicily. We used a large dataset of plant species presences/absences in vegetation plots to analyze the invasion patterns across habitats considering biogeography, life form and phenology of alien plants. Vegetation plots were classified based on the EUNIS classification of European habitats. The invasiveness of each species was expressed in terms of its absolute and percentage frequency. Representation of different life forms and phenological patterns…
sPlotOpen – An environmentally balanced, open‐access, global dataset of vegetation plots
Datos disponibles en https://github.com/fmsabatini/sPlotOpen_Code
Species–area relationships in continuous vegetation: Evidence from Palaearctic grasslands
Aim Species-area relationships (SARs) are fundamental scaling laws in ecology although their shape is still disputed. At larger areas, power laws best represent SARs. Yet, it remains unclear whether SARs follow other shapes at finer spatial grains in continuous vegetation. We asked which function describes SARs best at small grains and explored how sampling methodology or the environment influence SAR shape. Location Palaearctic grasslands and other non-forested habitats. Taxa Vascular plants, bryophytes and lichens. Methods We used the GrassPlot database, containing standardized vegetation-plot data from vascular plants, bryophytes and lichens spanning a wide range of grassland types throu…
An Updated Checklist of the Sicilian Native Edible Plants: Preserving the Traditional Ecological Knowledge of Century-Old Agro-Pastoral Landscapes
The traditional use of native wild food plants (NWFP) may represent a valuable supplementary food source for the present and future generations. In Sicily, the use of wild plants in the human diet dates back to very ancient times and still plays an important role in some rural communities. Moreover, in this regard, the natural and cultural inheritance of this island is wealthy and diversified for several reasons. First, Sicily hosts a rich vascular flora, with 3,000 native and 350 endemic plants. Second, due to its central position in the Mediterranean, the island has acted as a veritable melting pot for the ethnobotanical knowledge of the rural communities of the entire basin. We reviewed …
Dimensions of invasiveness: Links between local abundance, geographic range size, and habitat breadth in Europe's alien and native floras.
Understanding drivers of success for alien species can inform on potential future invasions. Recent conceptual advances highlight that species may achieve invasiveness via performance along at least three distinct dimensions: 1) local abundance, 2) geographic range size, and 3) habitat breadth in naturalized distributions. Associations among these dimensions and the factors that determine success in each have yet to be assessed at large geographic scales. Here, we combine data from over one million vegetation plots covering the extent of Europe and its habitat diversity with databases on species' distributions, traits, and historical origins to provide a comprehensive assessment of invasive…
GrassPlot – a database of multi-scale plant diversity in Palaearctic grasslands
GrassPlot is a collaborative vegetation-plot database organised by the Eurasian Dry Grassland Group (EDGG) and listed in the Global Index of Vegetation-Plot Databases (GIVD ID EU-00-003). GrassPlot collects plot records (relevés) from grasslands and other open habitats of the Palaearctic biogeographic realm. It focuses on precisely delimited plots of eight standard grain sizes (0.0001; 0.001; ... 1,000 m²) and on nested-plot series with at least four different grain sizes. The usage of GrassPlot is regulated through Bylaws that intend to balance the interests of data contributors and data users. The current version (v. 1.00) contains data for approximately 170,000 plots of different sizes a…
Classification of European and Mediterranean coastal dune vegetation
Aims: Although many phytosociological studies have provided detailed local and regional descriptions of coastal dune vegetation, a unified classification of this vegetation in Europe and the Mediterranean Basin has been missing. Our aim is to produce a formalized classification of this vegetation and to identify the main factors driving its plant species composition at a continental scale. LocationAtlantic and Baltic coasts of Europe, Mediterranean Basin and the Black Sea region. - Methods: We compiled a database of 30,759 plots of coastal vegetation, which were resampled to reduce unbalanced sampling effort, obtaining a data set of 11,769 plots. We classified these plots with TWINSPAN, int…
Plot - A new tool for global vegetation analyses
23Biodiversity Conservation Department, ISPRA – Italian National Institute for Environmental Protection and Research, Rome, Italy
Climate and socio-economic factors explain differences between observed and expected naturalization patterns of European plants around the world
Pouteau, R., et al.
EUNIS Habitat Classification: Expert system, characteristic species combinations and distribution maps of European habitats
Aim The EUNIS Habitat Classification is a widely used reference framework for European habitat types (habitats), but it lacks formal definitions of individual habitats that would enable their unequivocal identification. Our goal was to develop a tool for assigning vegetation-plot records to the habitats of the EUNIS system, use it to classify a European vegetation-plot database, and compile statistically-derived characteristic species combinations and distribution maps for these habitats. Location Europe. Methods We developed the classification expert system EUNIS-ESy, which contains definitions of individual EUNIS habitats based on their species composition and geographic location. Each ha…
Relevant habitats neglected by the Directive 92/43 EEC: the contribution of Vegetation Science for their reappraisal in Sicily
Field investigation carried out by the Sicilian botanists in the last 20 years enabled them to identify eight habitat types of high biogeographic and conservation interest, neglected by the Directive 92/43, which deservead hocconservation measures. For each of these habitats, a syntaxonomic interpretation of the corresponding plant communities, their main ecological, physiognomic and syndynamic traits and a list of diagnostic species are provided. Their classification into the macrotypes listed in the Annex I of the Directive 92/43 and the respective correspondence in EUNIS habitat classification are proposed. The habitats here described integrate those already proposed by the Italian Botan…
One Chara does not make Charetea in the Mediterranean aquatic vegetation
The results of preliminary phytosociological investigations on freshwater communities of Sicily biotopes with a significant presence of Characeae are presented. In spite of the relatively frequent occurrence of Characeae, a typical Charetea intermediae vegetation is rather rare in the investigated biotopes. Indeed, the Characeae are mainly part of communities attributable to the classes Potamogetonetea, Phragmito-Magnocaricetea, Juncetea maritimi and Isoeto-Nanojuncetea. Some ecological and functional implications are discussed, along with some consequences on conservation measures and policies, caused by the lack of knowledge on the Characeae of Sicily.
A multifaceted field sampling approach for the management of extremely narrow endemic vascular plant species
Extremely narrow endemic plant species (ENEs) are generally connected with micro- refugia characterized by particular environmental conditions. In-depth knowledge of the ecological requirements of ENEs is fundamental to plan appropriate conservation measures. Using cross-cutting technology, this paper gives a multifaceted approach to collect on-site data on the ecology of ENEs, defines the protocols for a correct sampling design and describes the type of equipment, the time and expenditure needed. Our sampling approach is based on two orthogonal transects, long enough to extrapolate the whole ecological gradient across the area of occupancy of the target species. Microclimatic data are reco…