0000000000148223

AUTHOR

Jelle Matthijnssens

0000-0003-1188-9733

showing 9 related works from this author

Multiple reassortment and interspecies transmission events contribute to the diversity of feline, canine and feline/canine-like human group A rotavir…

2011

Abstract RNA–RNA hybridization assays and complete genome sequence analyses have shown that feline rotavirus (FRV) and canine rotavirus (CRV) strains display at least two distinct genotype constellations (genogroups), represented by the FRV strain RVA/Cat-tc/AUS/Cat97/1984/G3P[3] and the human rotavirus (HRV) strain RVA/Human-tc/JPN/AU-1/1982/G3P3[9], respectively. G3P[3] and G3P[9] strains have been detected sporadically in humans. The complete genomes of two CRV strains (RVA/Dog-tc/ITA/RV198-95/1995/G3P[3] and RVA/Dog-tc/ITA/RV52-96/1996/G3P[3]) and an unusual HRV strain (RVA/Human-tc/ITA/PA260-97/1997/G3P[3]) were determined to further elucidate the complex relationships among FRV, CRV a…

Microbiology (medical)RotavirusSettore MED/07 - Microbiologia E Microbiologia ClinicaGenes ViralGenotypevirusesReassortmentBiologymedicine.disease_causeCat DiseasesMicrobiologyGenomeRotavirus InfectionsFelineDogsReassortmentRotavirusZoonosesGenotypeGeneticsmedicineAnimalsHumansDog DiseasesMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenyGeneticsWhole genome sequencingNSP1Phylogenetic treeStrain (biology)virus diseasesGenetic VariationSequence Analysis DNARotaviruVirologyInfectious DiseasesInterspecies transmissionChild PreschoolCatsReassortant VirusesHumanInfection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases
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A feline rotavirus G3P[9] carries traces of multiple reassortment events and resembles rare human G3P[9] rotaviruses.

2011

The full-length genome sequence of a feline G3P[9] rotavirus (RV) strain, BA222, identified from the intestinal content of an adult cat, was determined. Strain BA222 possessed a G3-P[9]-I2-R2-C2-M2-A3-N1-T3-E2-H3 genomic constellation, differing substantially from other feline RVs. Phylogenetic analyses of each genome segment revealed common origins with selected animal and zoonotic human RVs, notably with rare multi-reassortant human G3P[9] RVs (Ita/PAI58/96 and Ita/PAH136/96). Altogether, the findings suggest that feline RVs are genetically diverse and that human RVs may occasionally originate either directly or indirectly (via reassortment) from feline RVs.

RotavirusSettore MED/07 - Microbiologia E Microbiologia ClinicaSequence analysisReassortmentMolecular Sequence DataReoviridaeSequence HomologyBiologymedicine.disease_causeGenomeG3PhylogeneticsVirologyRotavirusmedicineAnimalsCluster AnalysisHumansfelinePhylogenyGeneticsWhole genome sequencingPhylogenetic treeSequence Analysis DNARotavirubiology.organism_classificationVirologyP[9]reassortantCatsRNA ViralReassortant VirusesThe Journal of general virology
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Are Human P[14] Rotavirus Strains the Result of Interspecies Transmissions from Sheep or Other Ungulates That Belong to the Mammalian Order Artiodact…

2009

ABSTRACT A limited number of human G6P[14] rotavirus strains that cause gastroenteritis in humans have been isolated in Europe and Australia. The complete genome sequences were determined for five of these human strains—B10925-97 (isolated in Belgium in 1997), 111/05-27 (Italy, 2005), PA169 (Italy, 1987), MG6 (Australia, 1993), and Hun5 (Hungary, 1997)—and their genetic relatedness to animal rotavirus strains was evaluated by sequencing the complete genome of the sheep rotavirus OVR762 (G8P[14]; Spain, 2002), the guanaco ( Lama guanicoe ) rotavirus strains Arg/Chubut/99 and Arg/Río Negro/98 (G8P[14] and G8P[1], respectively; Argentina, 1999 and 1998), the sable antelope strain RC-18/08 (G6…

RotavirusSequence analysisImmunologyPopulationMolecular Sequence DataReoviridaeSequence HomologyBiologymedicine.disease_causeMicrobiologyDNA sequencingRotavirus InfectionsEvolution MolecularPhylogeneticsVirologyRotavirusGenotypemedicineHumanseducationPhylogenyGeneticseducation.field_of_studyPhylogenetic treeAustraliaInfantSequence Analysis DNAbiology.organism_classificationVirologyGastroenteritisEuropeGenetic Diversity and EvolutionInsect ScienceChild PreschoolRNA Viral
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Genomic characterization of a novel group A lamb rotavirus isolated in Zaragoza, Spain.

2008

An ovine rotavirus (OVR) strain, 762, was isolated from a 30-day-old lamb affected with severe gastroenteritis, in Zaragoza, Spain, and the VP4, VP7, VP6, NSP4, and NSP5/NSP6 genes were subsequently characterized molecularly. Strain OVR762 was classified as a P[14] rotavirus, as the VP4 and VP8* trypsin-cleavage product of the VP4 protein revealed the highest amino acid (aa) identity (94% and 97%, respectively) with that of the P11[14] human rotavirus (HRV) strain PA169, isolated in Italy. Analysis of the VP7 gene product revealed that OVR762 possessed G8 serotype specificity, a type common in ruminants, with the highest degree of aa identity (95–98%) shared with serotype G8 HRV, bovine rot…

SerotypeRotavirusGenotypevirusesReassortmentMolecular Sequence DataSheep DiseasesGenome ViralBiologyViral Nonstructural Proteinsmedicine.disease_causeGroup ARotavirus InfectionsMicrobiologyCell Linefluids and secretionsVirologyRotavirusGenotypeChlorocebus aethiopsGeneticsmedicineAnimalsAmino Acid SequenceMolecular BiologyGenePhylogenyViral Structural ProteinsGenetic diversitySheepStrain (chemistry)Sequence Homology Amino Acidvirus diseasesRotavirus gastroenteritis genotypeGenetic VariationGeneral MedicineVirologySpainVirus genes
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Evolution of DS-1-like human G2P[4] rotaviruses assessed by complete genome analyses

2013

Group A rotaviruses (RVAs) are a leading cause of viral gastroenteritis in children, with G2P[4] RVA being one of the most common human strain worldwide. The complete genome sequences of nine G2P[4] RVA strains, selected from a 26-year archival collection (1985-2011) established in Palermo/Italy, were determined. A strain associated with a peak of G2P[4] RVA activity in 1996 resembled a reassortant strain identified in Kenya in 1982 and completely differed in the genomic make up from more recent strains that circulated during 2004-2011. Conversely, the 2004-2011 G2P[4] RVAs were genetically more similar to contemporary RVA strains circulating globally. Recent G2P[4] strains possessed either…

RotavirusSettore MED/07 - Microbiologia E Microbiologia ClinicaMolecular Sequence DataReassortmentSequence alignmentGenome ViralBiologymedicine.disease_causeGenomeRotavirus InfectionsEvolution MolecularViral ProteinsPhylogeneticsVirologyRotavirusGenotypemedicineHumansAmino Acid SequencePeptide sequencePhylogenyGeneticsRotavirus G2P[4] evolution ItalyStrain (biology)VirologyItalySequence AlignmentJournal of General Virology
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Unusual Assortment of Segments in 2 Rare Human Rotavirus Genomes

2010

Using full-length genome sequence analysis, we investigated 2 rare G3P[9] human rotavirus strains isolated from children with diarrhea. The genomes were recognized as assortments of genes closely related to rotaviruses originating from cats, ruminants, and humans. Results suggest multiple transmissions of genes from animal to human strains of rotaviruses.

DiarrheaMicrobiology (medical)Settore MED/07 - Microbiologia E Microbiologia ClinicaSettore MED/17 - Malattie InfettiveEpidemiologySequence analysisvirusesMolecular Sequence DataReassortmentlcsh:Medicineinterspecies transmissionGenome ViralBiologymedicine.disease_causeGenomeRotavirus Infectionslcsh:Infectious and parasitic diseasesfluids and secretionsPhylogeneticsRotavirusfull genome sequencingmedicineG3P[9]Humanslcsh:RC109-216GeneGenotypingPhylogenyWhole genome sequencingGeneticsSequence Analysis RNAlcsh:RDispatchvirus diseasesVirologyGastroenteritiszoonosesInfectious Diseasesrotavirushuman rotavirugenotypingChild PreschoolVirusesRNA ViralreassortmentgenomesSequence AlignmentEmerging Infectious Diseases
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Review of group A rotavirus strains reported in swine and cattle

2013

Group A rotavirus (RVA) infections cause severe economic losses in intensively reared livestock animals, particularly in herds of swine and cattle. RVA strains are antigenically heterogeneous, and are classified in multiple G and P types defined by the two outer capsid proteins, VP7 and VP4, respectively. This study summarizes published literature on the genetic and antigenic diversity of porcine and bovine RVA strains published over the last 3 decades. The single most prevalent genotype combination among porcine RVA strains was G5P[7], whereas the predominant genotype combination among bovine RVA strains was G6P[5], although spatiotemporal differences in RVA strain distribution were observ…

RotavirusSettore MED/07 - Microbiologia E Microbiologia ClinicaVeterinary medicineGenotypeEpidemiologyPorcineSwineCattle DiseasesCattle DiseasesBiologymedicine.disease_causeMicrobiologyGroup AArticleRotavirus InfectionsZoonosisRotavirusGenotypePrevalencemedicineAnimalsSwine DiseasesSurveillanceGeneral VeterinarySurveillance Epidemiology Vaccination Zoonosis Porcine Bovinebusiness.industryVaccinationZoonosisBovineGeneral Medicinemedicine.diseaseVirologyVaccinationHerdCapsid ProteinsCattleLivestockbusinessVeterinary Microbiology
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Rotavirus genotypes co-circulating in Europe between 2006 and 2009 as determined by EuroRotaNet, a pan-European collaborative strain surveillance net…

2011

SUMMARYEuroRotaNet, a laboratory network, was established in order to determine the diversity of co-circulating rotavirus strains in Europe over three or more rotavirus seasons from 2006/2007 and currently includes 16 countries. This report highlights the tremendous diversity of rotavirus strains co-circulating in the European population during three years of surveillance since 2006/2007 and points to the possible origins of these strains including genetic reassortment and interspecies transmission. Furthermore, the ability of the network to identify strains circulating with an incidence of ⩾1% allowed the identification of possible emerging strains such as G8 and G12 since the beginning of…

AdultMaleRotavirusAdolescentGenotypeEpidemiologyInternational CooperationReassortmentReoviridaemedicine.disease_causeRotavirus InfectionsYoung Adult03 medical and health sciencesSex FactorsPan european[SDV.MHEP.MI]Life Sciences [q-bio]/Human health and pathology/Infectious diseasesRotavirusGenotypemedicineHumansChildAged030304 developmental biologyAged 80 and overMolecular Epidemiology0303 health sciencesMolecular epidemiologybiology030306 microbiologyStrain (biology)Incidence (epidemiology)Age FactorsRotavirus VaccinesInfantMiddle Agedbiology.organism_classificationVirology3. Good healthEuropeInfectious DiseasesChild PreschoolPopulation Surveillance[SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/VirologyFemaleSeasonsEpidemiology and Infection
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Molecular characterization of genotype G6 human rotavirus strains detected in Italy from 1986 to 2009.

2011

Group A human rotavirus (HRV) strains with a bovine-like (G6) major outer capsid protein VP7 were first detected in Palermo, Italy, in the late 1980s, and subsequently worldwide. During a 25-year rotavirus surveillance period, additional HRV G6 strains, associated with either a P[9] or P[14] VP4 genotype, have been detected sporadically, but repeatedly, in Palermo. Whether these G6 HRVs were transmitted to humans directly from an animal reservoir or could have circulated at low prevalence in susceptible individuals is uncertain. Upon sequence analyses of the VP7, VP4, VP6, NSP4 and NSP5 gene segments, all the Italian HRV strains displayed a conserved genotype constellation, G6-P[9]/[14]-I2-…

Microbiology (medical)RotavirusGenotypingSettore MED/07 - Microbiologia E Microbiologia ClinicaLineage (genetic)GenotypevirusesPeriod (gene)Biologymedicine.disease_causeMicrobiologyGroup ARotavirus InfectionsViral ProteinsRotavirusGenotypeGeneticsmedicineAnimalsHumansMolecular BiologyGenotypingGeneG6Ecology Evolution Behavior and SystematicsPhylogenyGeneticsTransmission (medicine)Sequence Analysis RNAvirus diseasesRotaviruVirologyP[9]Infectious DiseasesItalyP[14]Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases
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