0000000000165457

AUTHOR

Arnau Montagud

0000-0002-7696-1241

showing 5 related works from this author

Microbial Diversity in the Midguts of Field and Lab-Reared Populations of the European Corn Borer Ostrinia nubilalis

2011

Background: Insects are associated with microorganisms that contribute to the digestion and processing of nutrients. The European Corn Borer (ECB) is a moth present world-wide, causing severe economical damage as a pest on corn and other crops. In the present work, we give a detailed view of the complexity of the microorganisms forming the ECB midgut microbiota with the objective of comparing the biodiversity of the midgut-associated microbiota and explore their potential as a source of genes and enzymes with biotechnological applications. Methodological/Principal Findings: A high-throughput sequencing approach has been used to identify bacterial species, genes and metabolic pathways, parti…

Bacterium identificationEuropean corn borerMicrobial diversityEuropean corn borerStaphylococcusBiodiversityOstrinia nubilalisNegibacteriaMothsAnimal tissueOstriniaMidgutMicrobial population dynamicsBacteria (microorganisms)PhylogenyMultidisciplinaryIntestine floraEcologybiologyBacterial geneSystems BiologyQRHexapodafood and beveragesAgricultureGenomicsLepidopteraPosibacteriaMAQUINAS Y MOTORES TERMICOSMedicineSynthetic BiologySequence AnalysisResearch ArticleBiotechnologyScienceBiological Data ManagementBacterial genomeMicrobiologydigestive systemZea maysArticleLepidoptera genitaliaMetabolic NetworksGeneticsAnimalsMicrobiomeBiologyWeissella paramesenteroidesBacteriabusiness.industryfungiStaphylococcus warneriComputational BiologyMidgutPopulation abundancebiology.organism_classificationNonhumanBiotechnologyAgronomyMetagenomicsWeissellaFISICA APLICADAMetagenomePEST analysisbusinessControlled studyAgroecology
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Reconstruction and analysis of genome-scale metabolic model of a photosynthetic bacterium

2010

Abstract Background Synechocystis sp. PCC6803 is a cyanobacterium considered as a candidate photo-biological production platform - an attractive cell factory capable of using CO2 and light as carbon and energy source, respectively. In order to enable efficient use of metabolic potential of Synechocystis sp. PCC6803, it is of importance to develop tools for uncovering stoichiometric and regulatory principles in the Synechocystis metabolic network. Results We report the most comprehensive metabolic model of Synechocystis sp. PCC6803 available, iSyn669, which includes 882 reactions, associated with 669 genes, and 790 metabolites. The model includes a detailed biomass equation which encompasses…

0106 biological sciencesSystems biologyIn silicoMetabolic networkComputational biologyBiologyModels Biological01 natural sciencesMetabolic engineeringGene Knockout Techniques03 medical and health sciencesStructural BiologyModelling and Simulation010608 biotechnologyBotanyBiomassPhotosynthesislcsh:QH301-705.5Molecular Biology030304 developmental biologyAutotrophic Processes0303 health sciencesGene Expression ProfilingApplied MathematicsSynechocystisSynechocystisGenomicsDarknessbiology.organism_classificationComputer Science ApplicationsFlux balance analysislcsh:Biology (General)Genes BacterialAutotrophic ProcessesModeling and SimulationEnergy sourceGenome BacterialResearch ArticleBMC Systems Biology
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Vanillin cell sensor

2007

Our project for iGEM 2006 consisted of designing a cellular vanillin biosensor. We used an EnvZ -E. coli strain as a chassis, and constructed two different devices: a sensor and an actuator, assembled using OmpR-P as a standardised mediator. The sensor device contained a computation- ally designed vanillin receptor and a synthetic two-component signal transduction protein (Trz). The receptor protein was based on a ribose-binding protein as scaffold. The Trz was built by fusion of the periplasmic and transmembrane domains of a Trg protein with an EnvZ kinase domain. When the receptor complex binds Trg, an allosteric motion is propagated to the cyto- plasmic EnvZ kinase domain, resulting in a…

0303 health sciencesReceptor complex030303 biophysicsAllosteric regulationAutophosphorylationBioengineeringCell BiologyBiologyCell biology03 medical and health sciencesSynthetic biologyTransmembrane domainProtein kinase domainBiochemistry[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologySignal transductionMolecular BiologyTranscription factor030304 developmental biologyBiotechnologyIET Synthetic Biology
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Aequorin-expressing yeast emits light under electric control

2011

In this study, we show the use of direct external electrical stimulation of a jellyfish luminescent calcium-activated protein, aequorin, expressed in a transgenic yeast strain. Yeast cultures were electrically stimulated through two electrodes coupled to a standard power generator. Even low (1.5. V) electric pulses triggered a rapid light peak and serial light pulses were obtained after electric pulses were applied periodically, suggesting that the system is re-enacted after a short refraction time. These results open up a new scenario, in the very interphase between synthetic biology and cybernetics, in which complex cellular behavior might be subjected to electrical control.

Activated proteinsLightScyphozoaAequorinApplied Microbiology and BiotechnologyElectricityHydroxidesCellular behaviorsPriority journalYeast electro-stimulationbiologyPhosphorescencePower generatorsGeneral MedicineElectrostimulationMAQUINAS Y MOTORES TERMICOSElectrodeElectric pulseInterphaseBioluminescenceYeast cultureGenetic EngineeringMATEMATICA APLICADABiotechnologyPotassium CompoundsLight pulse generatorsSaccharomyces cerevisiaeBioengineeringNanotechnologyLight pulseSaccharomyces cerevisiaeElectrical stimulationsYeast strainArticleAequorinBioluminescenceBiologySynthetic biologyBioelectronicsBioelectronicsbiology.organism_classificationElectric controlYeastElectric StimulationYeastFISICA APLICADABiophysicsbiology.proteinProtein expressionJellyfishElectrical controlLuminescenceCell functionTransgenics
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Yeast cultures with UCP1 uncoupling activity as a heating device

2009

7 páginas, 5 figuras, 3 tablas -- PAGS nros. 300-306

CultureSaccharomyces cerevisiaeMutantheatingBioengineeringSaccharomyces cerevisiaeCalorimetryCalorimetry03 medical and health scienceschemistry.chemical_compoundBrown adipose tissuemedicineElectrochemical gradientMolecular BiologyUncoupling Protein 1Cell Proliferation030304 developmental biologyinstrumentation0303 health sciencesGrowth mediumion Channelsbiology030302 biochemistry & molecular biologyTemperatureGeneral MedicineMetabolismbiology.organism_classificationYeastKineticsmedicine.anatomical_structurechemistryBiochemistryCalibrationMutationBiophysicsmitochondrial ProteinsCytologymetabolismdevicesBiotechnologyNew Biotechnology
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