0000000000266424

AUTHOR

Okan Osman Oglou

showing 3 related works from this author

ChemInform Abstract: Synthesis of New Asymmetric Xanthene Dyes via Catalyst-Free SNAr with Sulfur Nucleophiles.

2014

Addition of a single functional handle to the tricyclic moiety of fluorescein results in asymmetric xanthene dyes. Our synthesis of a new class of asymmetric xanthenes proceeds via an unusual SNAr with sulfur nucleophiles on electron rich aromatic xanthenes scaffolds in the absence of a metal catalyst. The resulting 3′-thioethers exhibit high photostability and are conveniently converted into reactive dyes for macromolecule labelling.

Xanthenechemistry.chemical_compoundchemistryNucleophileNucleophilic aromatic substitutionLabellingMoietychemistry.chemical_elementGeneral MedicineCombinatorial chemistrySulfurCatalysisMacromoleculeChemInform
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MODOMICS: a database of RNA modification pathways—2013 update

2012

MODOMICS is a database of RNA modifications that provides comprehensive information concerning the chemical structures of modified ribonucleosides, their biosynthetic pathways, RNA-modifying enzymes and location of modified residues in RNA sequences. In the current database version, accessible at http://modomics.genesilico.pl, we included new features: a census of human and yeast snoRNAs involved in RNA-guided RNA modification, a new section covering the 5′-end capping process, and a catalogue of ‘building blocks’ for chemical synthesis of a large variety of modified nucleosides. The MODOMICS collections of RNA modifications, RNA-modifying enzymes and modified RNAs have been also updated. A…

TRNA modificationSequence analysisBiologycomputer.software_genre03 medical and health sciences0302 clinical medicineRNA Small NuclearEpitranscriptomicsGeneticsHumansRNA Small NucleolarRNA Processing Post-TranscriptionalSmall nucleolar RNA030304 developmental biologyGeneticsInternet0303 health sciencesDatabaseSequence Analysis RNAMRNA modificationRNAArticlesRibosomal RNAEnzymes3. Good healthTransfer RNARNADatabases Nucleic Acidcomputer030217 neurology & neurosurgeryNucleic Acids Research
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Synthesis of new asymmetric xanthene dyes via catalyst-free SNAr with sulfur nucleophiles

2014

Addition of a single functional handle to the tricyclic moiety of fluorescein results in asymmetric xanthene dyes. Our synthesis of a new class of asymmetric xanthenes proceeds via an unusual SNAr with sulfur nucleophiles on electron rich aromatic xanthenes scaffolds in the absence of a metal catalyst. The resulting 3'-thioethers exhibit high photostability and are conveniently converted into reactive dyes for macromolecule labelling.

XantheneAzidesOrganic Chemistrychemistry.chemical_elementElectronsHydrogen-Ion ConcentrationSulfidesPhotochemistryBiochemistrySulfurCombinatorial chemistryCatalysisCatalysischemistry.chemical_compoundSpectrometry FluorescenceXantheneschemistryNucleophileNucleophilic aromatic substitutionMoietyPhysical and Theoretical ChemistrySulfurFluorescent DyesMacromoleculeOrganic & Biomolecular Chemistry
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