0000000000347992

AUTHOR

Freek T. Bakker

0000-0003-0227-6687

showing 2 related works from this author

Consistent phenological shifts in the making of a biodiversity hotspot: the Cape flora

2011

Abstract Background The best documented survival responses of organisms to past climate change on short (glacial-interglacial) timescales are distributional shifts. Despite ample evidence on such timescales for local adaptations of populations at specific sites, the long-term impacts of such changes on evolutionary significant units in response to past climatic change have been little documented. Here we use phylogenies to reconstruct changes in distribution and flowering ecology of the Cape flora - South Africa's biodiversity hotspot - through a period of past (Neogene and Quaternary) changes in the seasonality of rainfall over a timescale of several million years. Results Forty-three dist…

ecological nichesFloraEvolutionClimate ChangeBiodiversityClimate changesequence dataevolutionary responsesBiology580 Plants (Botany)MagnoliopsidaSouth AfricaCapeAdaptive radiationQH359-425Survival responsesskin and connective tissue diseasesrapid evolutionEcology Evolution Behavior and SystematicsPhylogenyEcological nicheEvolutionary BiologyEcologyheterogeneous environmentsPhenologyEcologyEPS-4flowering timeBiodiversityBiological EvolutionBiosystematiekfossil recordBiodiversity hotspot10121 Department of Systematic and Evolutionary Botany1105 Ecology Evolution Behavior and Systematicssouthern africaclimate-changeBiosystematicssense organsadaptive radiationResearch ArticleBMC Evolutionary Biology
researchProduct

Taxas de substituições das Annonaceas: uma perspectiva do modelo códon

2014

The Annonaceae includes cultivated species of economic interest and represents an important source of information for better understanding the evolution of tropical rainforests. In phylogenetic analyses of DNA sequence data that are used to address evolutionary questions, it is imperative to use appropriate statistical models. Annonaceae are cases in point: Two sister clades, the subfamilies Annonoideae and Malmeoideae, contain the majority of Annonaceae species diversity. The Annonoideae generally show a greater degree of sequence divergence compared to the Malmeoideae, resulting in stark differences in branch lengths in phylogenetic trees. Uncertainty in how to interpret and analyse these…

Nonsynonymous substitutionmodelo códondiversificationcomprimentos dos ramosSynonymous substitution ratecharactersfilogenéticaAnnonaceaePlant Sciencelcsh:Plant cultureDNA sequencinggeneraMolecular evolutionPhylogeneticsCodon modelsphylogeny reconstructionLaboratorium voor Moleculaire Biologielcsh:SB1-1110patternsCladeNon-synonymous substitutionNdhFGeneticsflowering plantsPhylogenetic treebiologyhistorical biogeographymolecular evolutionBiology and Life Sciencesbiology.organism_classificationBiosystematiekratePhylogeneticsAnnonaceaesubstituições não-sinônimassubstituições sinônimasBiosystematicsBranch lengthsNon-synonymous substitution ratemaximum-likelihoodLaboratory of Molecular BiologyEPSAgronomy and Crop ScienceFood Sciencenucleotide substitution
researchProduct