0000000000406662
AUTHOR
Karlis Pleiko
Photoluminescence ZnO nanorod biosensors for medical and food safety applications
Photoluminescence (PL) ZnO nanorods (NR) are prospect materials for biosensor applications. They can be deposited on solid state substrates and/or dispersed in liquid media. ZnO NRs demonstrate strong UV emission (3.28–3.3 eV), which depends on surface charge, formed by adsorbed molecules. In the present work we report on ZnO NRs, deposited on glass slides, used as biosensor templates for detection food pathogens. Change of ZnO PL after interaction with biomolecules was recorded. Dependence of PL intensity vs concentration of biomolecules was obtained. In the second part, ZnO nanorods were used as PL biomarkers. A suspension of ZnO NRs, conjugated with SSEA-4 antibodies (aSSEA-4) in PBS buf…
In vivo phage display: identification of organ-specific peptides using deep sequencing and differential profiling across tissues.
Abstract In vivo phage display is widely used for identification of organ- or disease-specific homing peptides. However, the current in vivo phage biopanning approaches fail to assess biodistribution of specific peptide phages across tissues during the screen, thus necessitating laborious and time-consuming post-screening validation studies on individual peptide phages. Here, we adopted bioinformatics tools used for RNA sequencing for analysis of high-throughput sequencing (HTS) data to estimate the representation of individual peptides during biopanning in vivo. The data from in vivo phage screen were analyzed using differential binding—relative representation of each peptide in the target…
New Tools for Streamlined In Vivo Homing Peptide Identification
In vivo peptide-phage display is an unbiased technique for mapping of the vascular diversity and identification of homing peptides. This chapter is intended to serve as a structured practical guide to execute in vivo T7 phage biopanning and data analysis experiments. We discuss experimental designs and protocols with emphasis on application of high-throughput sequencing-based technologies for streamlined in vivo biopanning and validation of homing peptides.