0000000000441096

AUTHOR

Ignacio Alastrué

showing 4 related works from this author

Identification of a large, fast-expanding HIV-1 subtype B transmission cluster among MSM in Valencia, Spain

2017

We describe and characterize an exceptionally large HIV-1 subtype B transmission cluster occurring in the Comunidad Valenciana (CV, Spain). A total of 1806 HIV-1 protease-reverse transcriptase (PR/RT) sequences from different patients were obtained in the CV between 2004 and 2014. After subtyping and generating a phylogenetic tree with additional HIV-1 subtype B sequences, a very large transmission cluster which included almost exclusively sequences from the CV was detected (n = 143 patients). This cluster was then validated and characterized with further maximum-likelihood phylogenetic analyses and Bayesian coalescent reconstructions. With these analyses, the CV cluster was delimited to 11…

0301 basic medicineRNA virusesMaleEpidemiologyLineage (evolution)lcsh:MedicineHIV InfectionsPathology and Laboratory MedicineMen who have sex with menCoalescent theorylaw.inventionGeographical LocationsDatabase and Informatics MethodsImmunodeficiency VirusesHIV ProteaselawMedicine and Health Scienceslcsh:ScienceValenciaPhylogenyMultidisciplinarybiologyPhylogenetic treePhylogenetic AnalysisHIV diagnosis and managementSubtypingHIV Reverse TranscriptaseVirusEuropeTransmission (mechanics)Medical MicrobiologyHIV epidemiologyViral PathogensVirusesFemalePathogensMalalties de transmissió sexualSequence AnalysisResearch ArticleBioinformaticsDisease clusterResearch and Analysis MethodsMicrobiology03 medical and health sciencesRetrovirusesDrug Resistance ViralHumansHomosexuality MaleMolecular Biology TechniquesMicrobial PathogensMolecular BiologyDemographyMolecular Biology Assays and Analysis Techniqueslcsh:RLentivirusOrganismsBiology and Life SciencesHIVbiology.organism_classificationDiagnostic medicine030104 developmental biologySpainpol Gene Products Human Immunodeficiency VirusPeople and PlacesHIV-1lcsh:QSequence AlignmentDemography
researchProduct

Emerging Trends in CRF02_AG Variants Transmission Among Men Who Have Sex With Men in Spain

2013

MaleMolecular EpidemiologyGenotypeMolecular Sequence DataHIV InfectionsSequence Analysis DNABiologyMen who have sex with menlaw.inventionInfectious DiseasesTransmission (mechanics)SpainlawDisease Transmission InfectiousHIV-1Cluster AnalysisHumansRNA ViralPharmacology (medical)Homosexuality MalePhylogenyDemographyJAIDS Journal of Acquired Immune Deficiency Syndromes
researchProduct

Efectividad del tratamiento antirretroviral combinado de gran actividad en eventos recurrentes de sida en una cohorte de seroconvertores al virus de …

2011

Resumen Introduccion La efectividad del tratamiento antirretroviral de gran actividad (TARGA) en la reduccion del tiempo al primer evento definitorio de sida ha sido demostrada por diversos estudios observacionales, pero el efecto en eventos recurrentes de sida no es tan evidente. Material y metodos Se dispone de 1.938 sujetos seroconvertores al VIH de la cohorte GEMES. Se ha utilizado una extension del modelo de Cox para analizar el tiempo desde la seroconversion a cada evento sida, que tiene en cuenta el tiempo entre sucesivos eventos y que permite que el riesgo de referencia cambie con el numero de paciente con sida previos. El calendario se dividio en tres periodos coincidiendo con la d…

Microbiology (medical)Enfermedades Infecciosas y Microbiología Clínica
researchProduct

The molecular epidemiology of HIV-1 in the Comunidad Valenciana (Spain): analysis of transmission clusters

2017

AbstractHIV infections are still a very serious concern for public heath worldwide. We have applied molecular evolution methods to study the HIV-1 epidemics in the Comunidad Valenciana (CV, Spain) from a public health surveillance perspective. For this, we analysed 1804 HIV-1 sequences comprising protease and reverse transcriptase (PR/RT) coding regions, sampled between 2004 and 2014. These sequences were subtyped and subjected to phylogenetic analyses in order to detect transmission clusters. In addition, univariate and multinomial comparisons were performed to detect epidemiological differences between HIV-1 subtypes, and risk groups. The HIV epidemic in the CV is dominated by subtype B i…

0301 basic medicineAdultMalemedicine.medical_specialtyAdolescentGenotypeHuman immunodeficiency virus (HIV)lcsh:MedicineHIV InfectionsBiologymedicine.disease_causeBioinformaticsArticleMen who have sex with menEvolution Molecular03 medical and health sciencesYoung AdultRisk groupsPublic health surveillanceRisk FactorsEpidemiologymedicineHumansEpidemiologialcsh:ScienceAgedMolecular EpidemiologyMultidisciplinaryPhylogenetic treeMolecular epidemiologyTransmission (medicine)lcsh:RMiddle Aged030104 developmental biologySpainPopulation SurveillanceHIV-1Femalelcsh:QMalalties de transmissió sexualReassortant VirusesDemographyScientific Reports
researchProduct