0000000000514809

AUTHOR

Fabiola Bastian

showing 18 related works from this author

A laboratory cave for the study of wall degradation in rock art caves : an implementation in the Vézère area

2013

The aim of this proposal is to present an original approach to the study and preservation of rock art caves. A multidisciplinary study of cave wall alteration will be performed to understand the impact of environmental context on the evolution of wall surfaces. The approach involves the choice of a cave with characteristics similar to painted caves in the studied area (Vézère Valley in Dordogne, France): e.g., cave wall alteration, lithology, morphology, etc. This selected cave is intended to become a laboratory cave, monitored for the acquisition of chemical, physical and biological environmental data on bedrock, air and fluids along with their characteristics. A cave without art or archae…

Archeology[SHS.ARCHEO]Humanities and Social Sciences/Archaeology and PrehistoryLithology[SDV]Life Sciences [q-bio]STAPHYLOCOCCUS-EQUORUMContext (language use)010501 environmental sciences01 natural sciencesArchaeological scienceDatabaseRock art caves03 medical and health sciencesLASCAUX CAVECavepréhistoireComputingMilieux_MISCELLANEOUSLaboratory cave0105 earth and related environmental sciencesCave survey0303 health sciencesgeographygeography.geographical_feature_categoryIDENTIFICATION030306 microbiologyBedrockCave wall alterationsIn situ measurementsArchaeologyPreservationIn situ analysis[SDE]Environmental SciencesRock artSimulationGeology
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The impact of arthropods on fungal community structure in Lascaux Cave

2009

Aims: To determine the major components of the fungal population present in Lascaux Cave, France. The ceiling, walls, sediments and soil were colonized by Fusarium solani in 2001 and later, in 2006, black stains appeared. However, the origin of the successive fungal invasions is unknown as well as the ecology of the cave. Methods and Results: The primers nu-SSU-0817F and nu-SSU-1536R were used for the direct amplification of fungal 18S-rDNA sequences from 11 samples. A total of 607 clones were retrieved. Eight out of the ten most abundant phylotypes corresponded to fungi associated with arthropods and represented about 50% of the clones. Conclusions: Entomophilous fungi play an important ro…

Geological Phenomena[SDV.BA] Life Sciences [q-bio]/Animal biology[SDV]Life Sciences [q-bio]ROCK ART PAINTINGSPopulation DynamicsSoil fungiBiologyBLACK STAINSGEOSMITHIAApplied Microbiology and BiotechnologyDNA RibosomalENTOMOPHILUS FUNGI03 medical and health sciencesCaveAnimalsDNA Fungal[SDV.MP.MYC]Life Sciences [q-bio]/Microbiology and Parasitology/Mycology030304 developmental biology0303 health sciencesgeographygeography.geographical_feature_category030306 microbiologyEcology[SDV.BA]Life Sciences [q-bio]/Animal biologyARTHROPODSISARIAFungal geneticsCommunity structureFungiGeneral Medicine15. Life on land[SDV.MP.MYC] Life Sciences [q-bio]/Microbiology and Parasitology/Mycologyhumanities[SDV] Life Sciences [q-bio][SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyEthnologyChristian ministryPaintingsFranceBiotechnology
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Real-time PCR detection of Ochroconis lascauxensis involved in the formation of black stains in the Lascaux Cave, France

2012

A real-time Polymerase Chain Reaction (PCR) assay was developed to detect and quantify Ochroconis lascauxensis in the Lascaux Cave in France. This fungus is the principal causal agent of the black stains threatening the Paleolithic paintings of this UNESCO World Heritage Site. The black stains outbreak could not be stopped in spite of using intensive biocide treatments. A sensitive and time-saving protocol is needed for determining the extent of the colonization. Sets of primers that target the ITS and RPB2 regions were designed and evaluated for specificity against O. lascauxensis. Genomic DNA extracted from five species of Ochroconis and 13 other fungal species frequently isolated from ca…

Environmental Engineering[SDV]Life Sciences [q-bio]Pcr assayFungal outbreaksFungusUnesco world heritageReal-Time Polymerase Chain Reactionlaw.inventionMicrobiology03 medical and health sciencesAscomycotaCavelaw[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular Biology[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyEnvironmental Chemistry[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyColoring AgentsDNA FungalWaste Management and Disposal[SDV.MP.MYC]Life Sciences [q-bio]/Microbiology and Parasitology/MycologyPolymerase chain reactionDNA Primers030304 developmental biology0303 health sciencesgeographygeography.geographical_feature_categoryBase Sequencebiology030306 microbiologyEcologyLascaux CaveOchroconis lascauxensisbiology.organism_classification[SDV.MP.MYC] Life Sciences [q-bio]/Microbiology and Parasitology/MycologyPollution3. Good healthgenomic DNAReal-time polymerase chain reactionOchroconis lascauxensis[SDE]Environmental SciencesFranceReal-time PCRScience of The Total Environment
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The nature of black stains in Lascaux Cave, France, as revealed by surface-enhanced Raman spectroscopy

2011

We used surface-enhanced Raman spectroscopy to investigate the chemical composition of the black stains threatening the rock-art paintings of Lascaux Cave, Montignac, France. The stains are mainly composed of melanin from the fungus Ochroconis sp. and the faecal pellets of the collembolan Folsomia candida. Surface-enhanced Raman spectroscopy is a useful technique for revealing the structure of unknown macromolecules in cultural heritage research. Copyright © 2011 John Wiley & Sons, Ltd.

geographygeography.geographical_feature_categoryChemistryMineralogy02 engineering and technologySurface-enhanced Raman spectroscopy010402 general chemistry021001 nanoscience & nanotechnology01 natural scienceshumanities0104 chemical sciencessymbols.namesakeCaveFolsomia candidaOchroconis sp.Environmental chemistrysymbolsGeneral Materials Science0210 nano-technologyRaman spectroscopySpectroscopyFaecal pelletJournal of Raman Spectroscopy
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Use of Biocides for the Control of Fungal Outbreaks in Subterranean Environments: The Case of the Lascaux Cave in France

2012

The Lascaux Cave in France suffered an outbreak of the fungus Fusarium solani in 2001. Biocides were applied for three years to control this outbreak. Four months after the initial biocide application, a new outbreak appeared in the form of black stains that progressively invaded the cave. The black stains on the ceiling and passage banks were so evident by 2007 that they became one of the caves major problems. Therefore, biocides were used again in 2008. The present study investigated the fungal communities associated with the black stains and the effectiveness of the biocides applied, by using cloning, denaturing gradient gel electrophoresis, and culture-dependent methods. A novel species…

Biocide[SDV]Life Sciences [q-bio]Molecular Sequence DataHerpotrichiellaceaeZoologyFungusDisease Outbreaks03 medical and health sciencesFusariumCaveDNA Ribosomal SpacerEnvironmental ChemistryPhylogeny[SDV.MP.MYC]Life Sciences [q-bio]/Microbiology and Parasitology/Mycology030304 developmental biology0303 health sciencesgeographygeography.geographical_feature_categorybiologyDenaturing Gradient Gel Electrophoresis030306 microbiologyEcologyOutbreakGeneral ChemistryOchroconis lascauxensisbiology.organism_classification[SDV.MP.MYC] Life Sciences [q-bio]/Microbiology and Parasitology/Mycology3. Good healthCavesMycosesRNA Ribosomal[SDE]Environmental SciencesFranceFusarium solaniTemperature gradient gel electrophoresisDisinfectants
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Aerobiology: an ecological indicator for early detection and control of fungal outbreaks in caves

2011

5 pages, 1 table, 13 references.

medicine.medical_specialty[SDV]Life Sciences [q-bio]General Decision SciencesEarly detectionAerobiologyFungal outbreaks010501 environmental sciencesBiology01 natural sciencesAerobiology03 medical and health sciencesCavemedicineEcology Evolution Behavior and SystematicsComputingMilieux_MISCELLANEOUS[SDV.MP.MYC]Life Sciences [q-bio]/Microbiology and Parasitology/Mycology030304 developmental biology0105 earth and related environmental sciences0303 health sciencesgeographygeography.geographical_feature_categoryEcologyEcologyFungiOutbreaksocial sciencesmusculoskeletal systembiodiversity and conservationHazard[SDV.MP.MYC] Life Sciences [q-bio]/Microbiology and Parasitology/Mycologyhumanities3. Good health[SDE.BE] Environmental Sciences/Biodiversity and EcologyShow cavesEcological indicatorDisturbance (ecology)environmental sciences and ecologyThreatened species[SDE]Environmental Sciences[SDE.BE]Environmental Sciences/Biodiversity and Ecology
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Two new species of the genus Ochroconis, O. lascauxensis and O. anomala isolated from black stains in Lascaux Cave, France

2012

In the year 2001, some conspicuous black stains appeared on the walls of Lascaux Cave in France, which progressively disseminated throughout the cave. These black stains were so evident by 2007 that they have become one of the cave's major problems. In a mycological study of the black stains, Ochroconis strains were abundant among the isolates and constituted the major group of melanised fungi. Two new species of the genus Ochroconis, O. lascauxensis and O. anomala, were isolated and described. The description is based on the morphology of the fungi and the phylogenetic relationships of two of its gene regions internal transcribed spacer (ITS) and RNA polymerase II subunit B (RPB2). In addi…

[SDV]Life Sciences [q-bio]Molecular Sequence DataDNA Ribosomal03 medical and health sciencesCaveAscomycotaPhylogeneticsBotanyDNA Ribosomal SpacerGeneticsInternal transcribed spacerAnomalaDNA FungalEcology Evolution Behavior and SystematicsPhylogeny[SDV.MP.MYC]Life Sciences [q-bio]/Microbiology and Parasitology/Mycology030304 developmental biologyBlack stains0303 health sciencesgeographygeography.geographical_feature_categorybiologyAscomycotaOchroconis anomala030306 microbiologyFungal geneticsLascaux CaveOchroconis lascauxensisbiology.organism_classification[SDV.MP.MYC] Life Sciences [q-bio]/Microbiology and Parasitology/Mycology3. Good healthCavesInfectious DiseasesOchroconis lascauxensisOchroconis anomala[SDE]Environmental SciencesPaintingsFrance
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Free-living amoebae in sediments from the Lascaux Cave in France

2013

The Lascaux Cave in France is an old karstic channel where the running waters are collected in a pool and pumped to the exterior. It is well-known that water bodies in the vicinity of humans are suspected to be reservoirs of amoebae and associated bacteria. In fact, the free-living amoebae Acanthamoeba astronyxis, Acanthamoeba castellanii, Acanthamoeba sp. and Hartmannella vermiformis were identified in the sediments of the cave using phylogenetic analyses and morphological traits. Lascaux Cave sediments and rock walls are wet due to a relative humidity near saturation and water condensation, and this environment and the presence of abundant bacterial communities constitute an ideal habitat…

[SDV]Life Sciences [q-bio]Acanthamoebamacromolecular substances03 medical and health sciencesfree living amoebae;Acanthamoeba;Hartmannella;Lascaux Cave;sedimentsparasitic diseases[SDV.BV]Life Sciences [q-bio]/Vegetal Biology030304 developmental biologyEarth-Surface Processes0303 health sciencesHartmannellabiologyfree living amoebae030306 microbiologysedimentsLascaux CaveGeologybiochemical phenomena metabolism and nutritionbiology.organism_classificationArchaeology6. Clean waterhumanities[SDE.BE] Environmental Sciences/Biodiversity and EcologyHartmannella[SDE]Environmental SciencesChristian ministry[SDE.BE]Environmental Sciences/Biodiversity and Ecology
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Impact of biocide treatments on the bacterial communities of the Lascaux Cave.

2009

The Lascaux Cave contains a remarkable set of paintings from the Upper Palaeolithic. Shortly after discovery in 1940, the cave was modified for public viewing and, in 2001, was invaded by a Fusarium solani species complex. Benzalkonium chloride was used from 2001 to 2004 to eliminate the fungal outbreak. In this study, we carried out a sampling in most of the cave halls and galleries. Sequence analysis and isolation methods detected that the most abundant genera of bacteria were Ralstonia and Pseudomonas. We suggest that, as a result of years of benzalkonium chloride treatments, the indigenous microbial community has been replaced by microbial populations selected by biocide application.

DNA BacterialBiocideGeologic SedimentsLegionellaRalstonia03 medical and health sciencesBenzalkonium chlorideBENZALKONIUM CHLORIDERalstoniaCaveLASCAUX CAVEPseudomonasBotanymedicineEscherichia coliAlcaligenesDNA FungalEcology Evolution Behavior and Systematics030304 developmental biology[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesgeographygeography.geographical_feature_categoryBenzalkonium chloride . Ralstonia spp. . Pseudomonas spp. . Lascaux Cavebiology030306 microbiologyEcologyFungal geneticsFungiOutbreakGeneral Medicinebiology.organism_classificationIsolation (microbiology)[SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/BacteriologyhumanitiesMicrobial population biologyPaintingsFrance[SDV.MP.BAC] Life Sciences [q-bio]/Microbiology and Parasitology/BacteriologyRALSTONIA SPP.Benzalkonium Compoundsmedicine.drugDisinfectantsDie Naturwissenschaften
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A microcosm experiment to evaluate the influence of location and quality of plant residues on residue decomposition and genetic structure of soil mic…

2007

The effects of location (soil surface vs. incorporated in soil) and nature of plant residues on degradation processes and indigenous microbial communities were studied by means of soil microcosms incubation in which the different soil zones influenced by decomposition i.e. residues, soil adjacent to residues (detritusphere) and distant soil unaffected by decomposition (bulk soil) were considered. Plant material decomposition, organic carbon assimilation by the soil microbial biomass and soil inorganic N dynamics were studied with 13 C labelled wheat straw and young rye. The genetic structure of the community in each soil zone were compared between residue locations and type by applying B- a…

carbon 13Crop residuecrop residuesMicroorganismRibosomal Intergenic Spacer analysis[SDV]Life Sciences [q-bio]Bulk soilarisaSoil Sciencemicrobal communities010501 environmental sciencesBiologymicrocosms01 natural sciencesMicrobiologycomplex mixturesbiodegradationResidue (chemistry)Organic matter0105 earth and related environmental sciences2. Zero hungerchemistry.chemical_classificationfood and beverages04 agricultural and veterinary sciences15. Life on landdetritusphereAgronomychemistryMicrobial population biology[SDE]Environmental Sciences040103 agronomy & agriculture0401 agriculture forestry and fisheriesMicrocosm
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Bacteria and free-living amoeba in the Lascaux Cave.

2008

3 pages, 1 table, 18 references. The collaboration of the Lascaux restoration team is highly appreciated. We thank Marisa Chelius for valuable comments on the manuscript.

DNA BacterialeducationBenzalkonium chloridemedicine.disease_causeMicrobiologyConfined SpacesCaveFusarium solani species complexmedicineEnvironmental MicrobiologyAnimalsAir ConditioningProtozoaAmoebaMolecular Biology[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologyFree living amoebaEcosystemgeographygeography.geographical_feature_categorybiologyBacteriaEcologyOutbreakfood and beveragesLascaux CavePathogenic bacteriaGeneral Medicinesocial sciencesDNA Protozoanbiology.organism_classificationmusculoskeletal systemhumanities[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyArchaeologyBiofilmsProtozoaPaintingsFrancePathogensBacteriaEnvironmental MonitoringResearch in microbiology
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The microbiology of Lascaux Cave.

2010

Lascaux Cave (Montignac, France) contains paintings from the Upper Paleolithic period. Shortly after its discovery in 1940, the cave was seriously disturbed by major destructive interventions. In 1963, the cave was closed due to algal growth on the walls. In 2001, the ceiling, walls and sediments were colonized by the fungus Fusarium solani. Later, black stains, probably of fungal origin, appeared on the walls. Biocide treatments, including quaternary ammonium derivatives, were extensively applied for a few years, and have been in use again since January 2008. The microbial communities in Lascaux Cave were shown to be composed of human-pathogenic bacteria and entomopathogenic fungi, the for…

Entomopathogenic fungiFUNGAL ECOLOGYGeological Phenomena[SDV]Life Sciences [q-bio]FungusBiologyMicrobiologyMicrobiology03 medical and health sciencesCaveFusarium[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyHumans[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyNatural enemiesMICROBIAL COMMUNITIES[SDV.MP.MYC]Life Sciences [q-bio]/Microbiology and Parasitology/MycologyEcosystem030304 developmental biology0303 health sciencesgeographygeography.geographical_feature_categoryBacteria030306 microbiologyFungal ecologyEcologyFungiAlgal growthEukaryotaPaleontologysocial sciencesMicroclimatebiology.organism_classificationmusculoskeletal system[SDV.MP.MYC] Life Sciences [q-bio]/Microbiology and Parasitology/MycologyhumanitiesQuaternary Ammonium Compounds[SDE]Environmental SciencesUpper PaleolithicPaintingsFranceFusarium solaniDisinfectantsMicrobiology (Reading, England)
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Impact of wheat straw decomposition on successional patterns of soil microbial community structure

2009

International audience; The dynamics of indigenous bacterial and fungal soil communities were followed throughout the decomposition of wheat straw residue. More precisely, such dynamics were investigated in the different soil zones under the influence of decomposing wheat straw residue (i.e. residues, soil adjacent to residue = detritusphere, and bulk soil). The genetic structures of bacterial and fungal communities were compared throughout the decomposition process long by applying B- and F-ARISA (for bacterial and fungal-automated ribosomal intergenic spacer analysis) to DNA extracts from these different zones. Residue decomposition induced significant changes in bacterial and fungal comm…

Ribosomal Intergenic Spacer analysisBulk soil[SDV.SA.AGRO]Life Sciences [q-bio]/Agricultural sciences/AgronomySoil ScienceEcological successionBiology[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil studyMicrobiologyActinobacteria03 medical and health sciencesBotanyOrganic matterFungal diversityCommunity dynamics030304 developmental biology2. Zero hungerchemistry.chemical_classification0303 health sciencesSoil microcosms04 agricultural and veterinary sciences15. Life on landPlant residuebiology.organism_classificationDetritusphereAgronomychemistryMicrobial population biologyBacterial diversitySoil water040103 agronomy & agriculture0401 agriculture forestry and fisheriesMicrocosm
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Evaluation of the addition of fertilizing component on microbial communities and decomposition of organic matter in soil

2012

Organic matter (OM) influences many of the soil functions and occupies a central position in the global carbon cycle. At the scale of the agro-ecosystem, primary productivity is dependent on the recycling of soil organic matter (SOM) by the action of decomposers (mainly bacteria and fungi), which mineralize organic compounds, releasing the nutrients needed for plant growth. At a global scale, the recycling of the SOM determines the carbon flux between soil and atmosphere, with major consequences in terms of environmental quality. In this context, the management of SOM stocks in agro-ecosystems is a major issue from which depend the maintenance of the productivity and sustainability of agric…

complément de fertilisation[SDE.BE] Environmental Sciences/Biodiversity and Ecology[SDV.SA] Life Sciences [q-bio]/Agricultural sciencessoldiversité microbiennematière organiqueminéralisation
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Evaluation of the effect of an additional fertilizer on the dynamics of microbial community and the decomposition of organic matter in soil

2012

Organic matter (OM) influences many of the soil functions and occupies a central position in the global carbon cycle. At the scale of the agro-ecosystem, primary productivity is dependent on the recycling of soil organic matter (SOM) by the action of decomposers (mainly bacteria and fungi), which mineralize organic compounds, releasing the nutrients needed for plant growth. At a global scale, the recycling of the SOM determines the carbon flux between soil and atmosphere, with major consequences in terms of environmental quality. In this context, the management of SOM stocks in agro-ecosystems is a major issue from which depend the maintenance of the productivity and sustainability of agric…

complément de fertilisation[SDV] Life Sciences [q-bio][SDE] Environmental Sciencessoldiversité microbiennematière organique[SDV.BV] Life Sciences [q-bio]/Vegetal Biologyminéralisation
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Écologie microbienne de la grotte de Lascaux

2009

National audience

[SDV] Life Sciences [q-bio][SDE] Environmental Sciencescontaminationmicroorganisme[SDV]Life Sciences [q-bio]cave[SDE]Environmental ScienceslascauxComputingMilieux_MISCELLANEOUSgrotte
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The nature of black stains in Lascaux Cave, France, as revealed by surface-enhanced Raman spectroscopy

2012

We used surface-enhanced Raman spectroscopy to investigate the chemical composition of the black stains threatening the rock-art paintings of Lascaux Cave, Montignac, France. The stains are mainly composed of melanin from the fungus Ochroconis sp. and the faecal pellets of the collembolan Folsomia candida. Surface-enhanced Raman spectroscopy is a useful technique for revealing the structure of unknown macromolecules in cultural heritage research. Copyright © 2011 John Wiley & Sons, Ltd. The chemical composition of the black stains threatening the rock-art paintings of Lascaux Cave, Montignac, France was studied using surface-enhanced Raman spectroscopy (SERS). The stains are mainly composed…

black stainsSERS[SDV.IDA]Life Sciences [q-bio]/Food engineering[SPI.GPROC]Engineering Sciences [physics]/Chemical and Process Engineeringmelanins[SDV.MP.MYC] Life Sciences [q-bio]/Microbiology and Parasitology/Mycologyhumanitiesrock-art paintings[SDV.MP.MYC]Life Sciences [q-bio]/Microbiology and Parasitology/Mycology
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La grotte de Lascaux : un écosystème complexe où bactéries et champignons interagissent

2007

La presse s’est fait l’écho des contaminations fongiques qui ont fait craindre pour la préservation des gravures pariétales de la grotte de Lascaux. Grâce à un financement du ministère de la Culture, plusieurs actions d’envergure ont été lancées, dont un programme de recherche qui vise à déterminer les causes de ce développement fongique préoccupant.

[SDV.BIO]Life Sciences [q-bio]/BiotechnologyGROTTECORREZE[SDV.BIO] Life Sciences [q-bio]/Biotechnology
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