0000000000526170

AUTHOR

Keith Dobney

0000-0001-9036-4681

showing 6 related works from this author

Neanderthal behaviour, diet, and disease inferred from ancient DNA in dental calculus

2017

Weyrich, Laura S. et al.

0301 basic medicineNeanderthalTime Factorsved/biology.organism_classification_rank.speciesneanderthal01 natural sciencesGenomeBelgiumWoolly rhinocerosCalculusDental CalculusHistory AncientNeanderthalsMultidisciplinarygeography.geographical_feature_categoryStomachCarnivoryMouflonIntestinesCavesHealthVegetarians010506 paleontologyMeatPan troglodytesBiologyMethanobrevibacter03 medical and health sciencesFood PreferencesCavebiology.animalAnimalsHumansDNA AncientSymbiosisancient DNAPerissodactyla0105 earth and related environmental sciencesgeographyMouthSheepved/biologyPenicilliumEnterocytozoonbiology.organism_classificationDietstomatognathic diseases030104 developmental biologyAncient DNAMetagenomicsSpainMethanobrevibacter oralisGenome Bacterial
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Storytelling and story testing in domestication

2014

The domestication of plants and animals marks one of the most significant transitions in human, and indeed global, history. Traditionally, study of the domestication process was the exclusive domain of archaeologists and agricultural scientists; today it is an increasingly multidisciplinary enterprise that has come to involve the skills of evolutionary biologists and geneticists. Although the application of new information sources and methodologies has dramatically transformed our ability to study and understand domestication, it has also generated increasingly large and complex datasets, the interpretation of which is not straightforward. In particular, challenges of equifinality, evolutio…

Crops AgriculturalProcess (engineering)InferenceCropsEquifinalityBiologyModels BiologicalAgricultural scienceGeneticModelsMultidisciplinary approachevolutionAnimalsHumansNarrativeNeolithicDomesticationDomesticHybridizationagricultureAgriculturalinferencemodelNarrationMultidisciplinaryInterpretation (philosophy)The Modern View of Domestication Special FeatureBiologicalData scienceAnimals DomesticHybridization GeneticGeneric health relevanceStorytelling
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Correction for Frantz et al., Ancient pigs reveal a near-complete genomic turnover following their introduction to Europe

2020

Significance Archaeological evidence indicates that domestic pigs arrived in Europe, alongside farmers from the Near East ∼8,500 y ago, yet mitochondrial genomes of modern European pigs are derived from European wild boars. To address this conundrum, we obtained mitochondrial and nuclear data from modern and ancient Near Eastern and European pigs. Our analyses indicate that, aside from a coat color gene, most Near Eastern ancestry in the genomes of European domestic pigs disappeared over 3,000 y as a result of interbreeding with local wild boars. This implies that pigs were not domesticated independently in Europe, yet the first 2,500 y of human-mediated selection applied by Near Eastern Ne…

Gene FlowMultidisciplinarySwineLibrary scienceSkin PigmentationBiological SciencesCorrectionsDNA MitochondrialDomesticationEuropeMiddle EastAnthropologyevolutionAnimalsNeolithicDNA AncientHistory AncientPhylogeny
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Ancient pigs reveal a near-complete genomic turnover following their introduction to Europe

2019

International audience; Archaeological evidence indicates that pig domestication had begun by ∼10,500 y before the present (BP) in the Near East, and mitochondrial DNA (mtDNA) suggests that pigs arrived in Europe alongside farmers ∼8,500 y BP. A few thousand years after the introduction of Near Eastern pigs into Europe, however, their characteristic mtDNA signature disappeared and was replaced by haplotypes associated with European wild boars. This turnover could be accounted for by substantial gene flow from local Euro-pean wild boars, although it is also possible that European wild boars were domesticated independently without any genetic contribution from the Near East. To test these hyp…

0301 basic medicineSwine[SHS.ANTHRO-BIO]Humanities and Social Sciences/Biological anthropologySkin Pigmentation[SHS]Humanities and Social SciencesGene flowDomesticationddc:590BREEDSDOMESTIC PIGS/dk/atira/pure/subjectarea/asjc/1000HISTORY0601 history and archaeologyNeolithicHistory AncientPhylogenyMultidisciplinary060102 archaeologyINTROGRESSIONEurope ; pigs ; domestication ; genomesWILD06 humanities and the artsArchaeological evidenceGene flowEuropeSPREADCoatMitochondrial DNAEvolutionZoology930Locus (genetics)BiologyAnimal Breeding and GenomicsDNA MitochondrialMiddle East03 medical and health sciencesAnimalsFokkerij en GenomicaDNA AncientGeneralDomesticationddc:930HaplotypeDNA900 Geschichte und Geografie::930 Geschichte des Altertums (bis ca. 499) Archäologie::930 Geschichte des Altertums bis ca. 499 ArchäologieLONGSIZE030104 developmental biologydomestication evolution gene flow NeolithicWIAS
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Pig domestication and human-mediated dispersal in western Eurasia revealed through ancient DNA and geometric morphometrics.

2013

Zooarcheological evidence suggests that pigs were domesticated in Southwest Asia ∼8,500 BC. They then spread across the Middle and Near East and westward into Europe alongside early agriculturalists. European pigs were either domesticated independently or more likely appeared so as a result of admixture between introduced pigs and European wild boar. As a result, European wild boar mtDNA lineages replaced Near Eastern/Anatolian mtDNA signatures in Europe and subsequently replaced indigenous domestic pig lineages in Anatolia. The specific details of these processes, however, remain unknown. To address questions related to early pig domestication, dispersal, and turnover in the Near East, we …

MESH: Sequence Analysis DNAsequence analysisSwineSus scrofa[SHS.ANTHRO-BIO]Humanities and Social Sciences/Biological anthropologyinsightsshapephylogeography01 natural sciences11. SustainabilityexpansionsMESH: AnimalswildNeolithicMESH: Swineagriculture0303 health sciencesKUL-METH-ArchaeologyMESH: AsiaPig domesticationmitochondrialEuropeDomestic pigMESH: PhylogeographyAnimals DomestichistoryMESH: Molareuropewild boar010506 paleontologyKUL-CoE-CASoriginsAsialikelihoodneolithic; phylogeography; pig domestication; wild boar; animal distribution; animals; animals domestic; Asia; DNA mitochondrial; Europe; humans; molar; phylogeography; sequence analysis DNA; Sus scrofa; SwineZoologypig domesticationfarmersBiologyNeolithic.Animal Breeding and GenomicsSettore BIO/08Wild boarDNA Mitochondrial03 medical and health sciencesWild boarBronze Agebiology.animalGeneticsdomesticAnimalsHumansFokkerij en GenomicaMESH: Animals DomesticDomesticationMolecular BiologyEcology Evolution Behavior and SystematicsDiscoveries030304 developmental biology0105 earth and related environmental sciencesMESH: Humans[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]MESH: Animal DistributionMESH: DNA MitochondrialDNASequence Analysis DNAMolarMESH: Sus scrofaAncient DNAIron AgeWIASBiological dispersalMESH: EuropeAnimal DistributionChronology
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Sequencing ancient calcified dental plaque shows changes in oral microbiota with dietary shifts of the Neolithic and Industrial revolutions

2013

The importance of commensal microbes for human health is increasingly recognized, yet the impacts of evolutionary changes in human diet and culture on commensal microbiota remain almost unknown. Two of the greatest dietary shifts in human evolution involved the adoption of carbohydrate-rich Neolithic (farming) diets (beginning ∼10,000 years before the present) and the more recent advent of industrially processed flour and sugar (in ∼1850). Here, we show that calcified dental plaque (dental calculus) on ancient teeth preserves a detailed genetic record throughout this period. Data from 34 early European skeletons indicate that the transition from hunter-gatherer to farming shifted the oral m…

Dental PlaqueBiologyDental plaqueArticleCariogenic bacteriaOral MicrobiotaHuman healthGeneticsmedicineHumansIndustrybusiness.industryEcologyCalculus (dental)Mouth MucosaHigh-Throughput Nucleotide Sequencingmedicine.diseaseBiological EvolutionDietstomatognathic diseasesArchaeologyHuman evolutionAgricultureMetagenomicsMetagenomebusinessNature Genetics
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