0000000000563560

AUTHOR

Javier Buceta

showing 4 related works from this author

A Quantitative Biophysical Principle to Explain the 3D Cellular Connectivity in Curved Epithelia

2021

Epithelial cell organization and the mechanical stability of tissues are closely related. In this context, it has been recently shown that packing optimization in bended/folded epithelia is achieved by a surface tension energy minimization mechanism that leads to a novel cellular shape: the scutoid. However, further cellular and tissue level implications of this new developmental paradigm remain unknown. Here we focus on the relation of this complex cellular shape and the connectivity between cells. We address this problem using a combination of computational, experimental, and biophysical approaches in tubular epithelia. We dissect the contribution of the energetic drivers inducing the com…

Mechanical stabilityMechanism (biology)ChemistryBiophysicsTissue levelContext (language use)SSRN Electronic Journal
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Mechanics and self-organization in tissue development

2021

Self-organization is an all-important feature of living systems that provides the means to achieve specialization and functionality at distinct spatio-temporal scales. Herein, we review this concept by addressing the packing organization of cells, the sorting/compartmentalization phenomenon of cell populations, and the propagation of organizing cues at the tissue level through traveling waves. We elaborate on how different theoretical models and tools from Topology, Physics, and Dynamical Systems have improved the understanding of self-organization by shedding light on the role played by mechanics as a driver of morphogenesis. Altogether, by providing a historical perspective, we show how i…

Self-organizationPhysicsSelf-organizationTraveling wavesDynamical systems theoryCell packingSortingCompartmentalization (information security)Cell BiologyMechanicsDevelopmental mechanismsLiving systemsCell sortingERKPhenomenonDevelopmental mechanicsSpecialization (functional)MorphogenesisHumansEpitheliaTopology (chemistry)Developmental BiologySignal Transduction
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TiFoSi: an efficient tool for mechanobiology simulations of epithelia

2020

[Motivation]: Emerging phenomena in developmental biology and tissue engineering are the result of feedbacks between gene expression and cell biomechanics. In that context, in silico experiments are a powerful tool to understand fundamental mechanisms and to formulate and test hypotheses.

Statistics and ProbabilityCell signalingCell divisionComputer scienceSystems biologyIn silicoCellBiophysicsMorphogenesisVertex ModelContext (language use)Computational biologyCleavage (embryo)BiochemistryEpitheliumFeedbackMechanobiologyEpithelia Simulation03 medical and health sciencesParacrine signallingMechanobiologyTissue engineeringMorphogenesismedicineComputer SimulationCellular dynamicsMolecular Biology030304 developmental biology0303 health sciencesSystems Biology030302 biochemistry & molecular biologyComputational BiologyCell cycleTissue SimulationJuxtacrine signallingComputer Science ApplicationsComputational Mathematicsmedicine.anatomical_structureComputational Theory and MathematicsDevelopmental biologyCell DivisionSoftwareDevelopmental BiologyBioinformatics
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Comprehensive profiling of polyclonal sera targeting a non-enveloped viral capsid

2022

AbstractDespite their fundamental role in resolving viral infections, our understanding of how polyclonal neutralizing antibody responses target non-enveloped viruses remains limited. To define these responses, we obtained the full antigenic profile of multiple human and mouse polyclonal sera targeting the capsid of a prototypical picornavirus. Our results uncover significant variation in the breadth and strength of neutralization sites targeted by individual human polyclonal responses, which contrasted with homogenous responses observed in experimentally infected mice. We further use these comprehensive antigenic profiles to define key structural and evolutionary parameters that are predic…

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