0000000000669566

AUTHOR

Michaela Frye

0000-0002-5636-6840

showing 3 related works from this author

Positioning Europe for the EPITRANSCRIPTOMICS challenge

2018

WOS: 000444092300018 PubMed ID: 29671387 The genetic alphabet consists of the four letters: C, A, G, and T in DNA and C,A,G, and U in RNA. Triplets of these four letters jointly encode 20 different amino acids out of which proteins of all organisms are built. This system is universal and is found in all kingdoms of life. However, bases in DNA and RNA can be chemically modified. In DNA, around 10 different modifications are known, and those have been studied intensively over the past 20years. Scientific studies on DNA modifications and proteins that recognize them gave rise to the large field of epigenetic and epigenomic research. The outcome of this intense research field is the discovery t…

Epigenomics0301 basic medicine[SDV]Life Sciences [q-bio]Gene ExpressionDetection of RNA ModificationEpigenesis GeneticTranscriptomechemistry.chemical_compoundEcologyEvolution & EthologyNeoplasmsRNA NeoplasmEuropean FundingComputingMilieux_MISCELLANEOUSRNA Neoplasm/geneticsEpitranscriptomicsEpigenomicsStem CellsDNA NeoplasmNeoplasms/genetics[SDV] Life Sciences [q-bio]EuropeGene Expression Regulation NeoplasticDetection of RNA modificationGenetics & GenomicsComputational biologyBiologyBiochemistry & ProteomicsENCODE03 medical and health sciencesEpigenomics/standardsEpitranscriptomicsModel systemsHumansEpigeneticsDatabase of ModificationDNA Neoplasm/geneticsMolecular BiologyComputational & Systems BiologyEuropean funding[SDV.GEN]Life Sciences [q-bio]/GeneticsGene Expression ProfilingFOS: Clinical medicineNeurosciencesModel SystemsRNACell Biology030104 developmental biologychemistryGene Expression Profiling/methodsAlphabetTranscriptomeDNARNA Biology
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RNA cytosine methylation by Dnmt2 and NSun2 promotes tRNA stability and protein synthesis.

2012

The function of cytosine-C5 methylation, a widespread modification of tRNAs, has remained obscure, particularly in mammals. We have now developed a mouse strain defective in cytosine-C5 tRNA methylation, by disrupting both the Dnmt2 and the NSun2 tRNA methyltransferases. Although the lack of either enzyme alone has no detectable effects on mouse viability, double mutants showed a synthetic lethal interaction, with an underdeveloped phenotype and impaired cellular differentiation. tRNA methylation analysis of the double-knockout mice demonstrated complementary target-site specificities for Dnmt2 and NSun2 and a complete loss of cytosine-C5 tRNA methylation. Steady-state levels of unmethylate…

MaleRNA StabilityMutantBiologyNSun2MethylationCytosineMiceRNA TransferStructural BiologyProtein biosynthesism5CAnimalsDNA (Cytosine-5-)-MethyltransferasesMolecular BiologytRNACells CulturedMice KnockoutTRNA methylationRNACell DifferentiationMethylationMethyltransferasesTRNA MethyltransferasesBiochemistryProtein BiosynthesisTransfer RNADNA methylationDnmt2FemaleGene DeletionNature structuralmolecular biology
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Aberrant methylation of tRNAs links cellular stress to neuro-developmental disorders.

2014

Mutations in the cytosine-5 RNA methyltransferase NSun2 cause microcephaly and other neurological abnormalities in mice and human. How post-transcriptional methylation contributes to the human disease is currently unknown. By comparing gene expression data with global cytosine-5 RNA methylomes in patient fibroblasts and NSun2-deficient mice, we find that loss of cytosine-5 RNA methylation increases the angiogenin-mediated endonucleolytic cleavage of transfer RNAs (tRNA) leading to an accumulation of 5' tRNA-derived small RNA fragments. Accumulation of 5' tRNA fragments in the absence of NSun2 reduces protein translation rates and activates stress pathways leading to reduced cell siz…

Small RNARNA methylationBiologyNSun2MethylationGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesMisuMice0302 clinical medicineRNA TransferGene expressionAnimalsHumans5‐methylcytidine ; Misu ; Nsun2 ; Rna ModificationMolecular Biology030304 developmental biology5-methylcytidineRegulation of gene expression0303 health sciencesTRNA methylationGeneral Immunology and MicrobiologyGeneral NeuroscienceGene Expression ProfilingRNABrainArticlesMethylationMethyltransferasesRibonuclease PancreaticRNA modificationMolecular biologyOxidative StressGene Expression RegulationTransfer RNANervous System Diseases030217 neurology & neurosurgery5‐methylcytidine
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