Intercomparison of methods to estimate GPP based on CO2 and COS flux measurements

Knowing the components of ecosystem scale carbon exchange is crucial in order to develop better models and future predictions of the terrestrial carbon cycle. However, there are several uncertainties and unknowns related to current photosynthesis estimates. In this study, we test the use of four different methods for quantifying photosynthesis at the ecosystem scale, of which two are based on carbon dioxide (CO2) and two on carbonyl sulfide (COS) flux measurements. The CO2-based methods use traditional flux partitioning and artificial neural networks to separate the net CO2 flux into respiration and photosynthesis. The COS-based methods make use of a unique five year COS flux data set at a …

Applicability and consequences of the integration of alternative models for CO2 transfer velocity into a process-based lake model

Freshwater lakes are important in carbon cycling, especially in the boreal zone where many lakes are supersaturated with the greenhouse gas carbon dioxide (CO2) and emit it to the atmosphere, thus ventilating carbon originally fixed by the terrestrial system. The exchange of CO2 between water and the atmosphere is commonly estimated using simple wind-based parameterizations or models of gas transfer velocity (k). More complex surface renewal models, however, have been shown to yield more correct estimates of k in comparison with direct CO2 flux measurements. We incorporated four gas exchange models with different complexity into a vertical process-based physico-biochemical lake model, MyLak…

Intercomparison of methods to estimate GPP based on CO<sub>2</sub> and COS flux measurements

Abstract. Knowing the components of ecosystem scale carbon exchange is crucial in order to develop better models and future predictions of the terrestrial carbon cycle. However, there are several uncertainties and unknowns related to current photosynthesis estimates. In this study, we test the use of four different methods for quantifying photosynthesis at the ecosystem scale, of which two are based on carbon dioxide (CO2) and two on carbonyl sulfide (COS) flux measurements. The CO2-based methods use traditional flux partitioning and artificial neural networks to separate the net CO2 flux into respiration and photosynthesis. The COS-based methods make use of a unique five year COS flux data…

Tube transport of water vapor with condensation and desorption

Attenuation and delay of active tracers in tube transport is an important current problem, but its full explanation is still lacking. To this end a model is introduced, where part of a tracer undergoes condensation and evaporation, treated as a diffusion-type process, in addition to Taylor dispersion. Condensation of water was verified by high-speed imaging, and the model solution fitted the breakthrough curves of laboratory measurements with pulses of water vapor of varying relative humidity. The model provides a transfer function whose performance was verified against field measurements. peerReviewed

Intercomparison of methods to estimate gross primary production based on CO2 and COS flux measurements

Separating the components of ecosystem-scale carbon exchange is crucial in order to develop better models and future predictions of the terrestrial carbon cycle. However, there are several uncertainties and unknowns related to current photosynthesis estimates. In this study, we evaluate four different methods for estimating photosynthesis at a boreal forest at the ecosystem scale, of which two are based on carbon dioxide (CO2) flux measurements and two on carbonyl sulfide (COS) flux measurements. The CO2-based methods use traditional flux partitioning and artificial neural networks to separate the net CO2 flux into respiration and photosynthesis. The COS-based methods make use of a unique 5…

CH4 oxidation in a boreal lake during the development of hypolimnetic hypoxia

AbstractFreshwater ecosystems represent a significant natural source of methane (CH4). CH4 produced through anaerobic decomposition of organic matter (OM) in lake sediment and water column can be either oxidized to carbon dioxide (CO2) by methanotrophic microbes or emitted to the atmosphere. While the role of CH4 oxidation as a CH4 sink is widely accepted, neither the magnitude nor the drivers behind CH4 oxidation are well constrained. In this study, we aimed to gain more specific insight into CH4 oxidation in the water column of a seasonally stratified, typical boreal lake, particularly under hypoxic conditions. We used 13CH4 incubations to determine the active CH4 oxidation sites and the …

Multi-functionality and sustainability in the European Union’s forests

Diurnal and Seasonal Solar Induced Chlorophyll Fluorescence and Photosynthesis in a Boreal Scots Pine Canopy

Solar induced chlorophyll fluorescence has been shown to be increasingly an useful proxy for the estimation of gross primary productivity (GPP), at a range of spatial scales. Here, we explore the seasonality in a continuous time series of canopy solar induced fluorescence (hereafter SiF) and its relation to canopy gross primary production (GPP), canopy light use efficiency (LUE), and direct estimates of leaf level photochemical efficiency in an evergreen canopy. SiF was calculated using infilling in two bands from the incoming and reflected radiance using a pair of Ocean Optics USB2000+ spectrometers operated in a dual field of view mode, sampling at a 30 min time step using custom written …

Snowpack concentrations and estimated fluxes of volatile organic compounds in a boreal forest

Abstract. Soil provides an important source of volatile organic compounds (VOCs) to atmosphere, but in boreal forests these fluxes and their seasonal variations have not been characterized in detail. Especially wintertime fluxes are almost completely unstudied. In this study, we measured the VOC concentrations inside the snowpack in a boreal Scots pine (Pinus sylvestris L.) forest in southern Finland, using adsorbent tubes and air samplers installed permanently in the snow profile. Based on the VOC concentrations at three heights inside the snowpack, we estimated the fluxes of these gases. We measured 20 VOCs from the snowpack, monoterpenes being the most abundant group with concentrations …

Applicability and consequences of the integration of alternative models for CO<sub>2</sub> transfer velocity into a process-based lake model

Abstract. Freshwater lakes are important in carbon cycling, especially in the boreal zone where many lakes are supersaturated with the greenhouse gas carbon dioxide (CO2) and emit it to the atmosphere, thus ventilating carbon originally fixed by the terrestrial system. The exchange of CO2 between water and the atmosphere is commonly estimated using simple wind-based parameterizations or models of gas transfer velocity (k). More complex surface renewal models, however, have been shown to yield more correct estimates of k in comparison with direct CO2 flux measurements. We incorporated four gas exchange models with different complexity into a vertical process-based physico-biochemical lake mo…

Sorption-Caused Attenuation and Delay of Water Vapor Signals in Eddy-Covariance Sampling Tubes and Filters

AbstractAdsorption and desorption (together called sorption) processes in sampling tubes and filters of eddy-covariance stations cause attenuation and delay of water vapor signals, leading to an underestimation of water vapor fluxes by tens of percent. The aim of this work was (i) to quantify the effects on sorption in filters and tubes of humidity, flow rate, and dirtiness and (ii) to test a recently introduced sorption model that facilitates correction of fluxes. Laboratory measurements on the transport of water vapor pulses through tubes and filters were carried out, and eddy-covariance field measurements were also used.In the laboratory measurements, the effects of sorption processes we…