0000000001103417

AUTHOR

John A. Cunningham

showing 3 related works from this author

Open data and digital morphology

2017

International audience; Over the past two decades, the development of methods for visualizing and analysing specimens digitally, in three and even four dimensions, has transformed the study of living and fossil organisms. However, the initial promise that the widespread application of such methods would facilitate access to the underlying digital data has not been fully achieved. The underlying datasets for many published studies are not readily or freely available, introducing a barrier to verification and reproducibility, and the reuse of data. There is no current agreement or policy on the amount and type of data that should be made available alongside studies that use, and in some cases…

0106 biological sciences0301 basic medicineLife Sciences & Biomedicine - Other TopicsDYNAMICSComputer scienceDatasets as TopicReuse01 natural sciencesFOSSILSthree-dimensional modelsNaturvetenskapData CurationGeneral Environmental ScienceEcologypalaeontology[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]70General Medicine11 Medical And Health SciencesCCbiomechanics Keywords: digital dataOpen dataPerspectiveComputer data storage[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/PaleontologyGeneral Agricultural and Biological SciencesNatural SciencesLife Sciences & BiomedicineDatasets as Topic1001TISSUESphenotypeBest practiceDigital dataLibrary science25Environmental Sciences & Ecology010603 evolutionary biologyBiological Science DisciplinesGeneral Biochemistry Genetics and Molecular BiologyQA76functional analysisSet (abstract data type)03 medical and health sciencesPALEONTOLOGYBiologySubject Category: Morphology and biomechanics Subject Areas: evolutionvisualizationdigital dataEvolutionary BiologyScience & TechnologyTOMOGRAPHIC MICROSCOPYMorphology and BiomechanicsGeneral Immunology and Microbiologybusiness.industryResearchQHReproducibility of Resultscomputed tomographyPERFORMANCE06 Biological Sciences144Data scienceEVOLUTIONVisualization030104 developmental biologyVISUALIZATION07 Agricultural And Veterinary SciencesbusinessProceedings of the Royal Society B: Biological Sciences
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Testing models of dental development in the earliest bony vertebrates, Andreolepis and Lophosteus

2012

Theories on the development and evolution of teeth have long been biased by the fallacy that chondrichthyans reflect the ancestral condition for jawed vertebrates. However, correctly resolving the nature of the primitive vertebrate dentition is challenged by a dearth of evidence on dental development in primitive osteichthyans. Jaw elements from the Silurian–Devonian stem-osteichthyansLophosteusandAndreolepishave been described to bear a dentition arranged in longitudinal rows and vertical files, reminiscent of a pattern of successional development. We tested this inference, using synchrotron radiation X-ray tomographic microscopy (SRXTM) to reveal the pattern of skeletal development preser…

Surface PropertiesAndreolepisBiologyAndreolepisstomatognathic systembiology.animalevolutionAnimalsDentitiontoothdevelopmentPhylogenyLophosteusFeature (archaeology)DentitionFossilsPalaeontologyVertebrateLophosteusAnatomyX-Ray Microtomographybiology.organism_classificationAgricultural and Biological Sciences (miscellaneous)Biological Evolutionstomatognathic diseasesJawOsteichthyesDentinVertebratesOdontogenesisGeneral Agricultural and Biological SciencesToothSynchrotrons
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Table S1 from Open data and digital morphology

2017

Summary of main online repositories for 3D digital morphological data.

ComputingMethodologies_PATTERNRECOGNITIONComputingMethodologies_IMAGEPROCESSINGANDCOMPUTERVISIONComputingMethodologies_COMPUTERGRAPHICS
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