0000000001188315

AUTHOR

Dehui Qiu

showing 2 related works from this author

The catalytic properties of DNA G-quadruplexes rely on their structural integrity

2021

International audience; The influence of the G-quartet structural integrity on the catalytic activity of the G-quadruplex (G4) was investigated by comparing the G4-DNAzyme performances of a series of G4s with a G-vacancy site and a G-triplex (G-tri). The results presented herein not only confirm that the structural integrity of the 3’-end G-quartet is necessary for G4s to be catalytically competent but also show how to remediate G-vacancy-mediated catalytic activity losses via the addition of guanine surrogates in an approach referred to as G-vacancy complementation strategy that is applicable to parallel G4s only. Furthermore, this study demonstrates that the terminal G-quartet could act a…

GuanineG-vacancy02 engineering and technology010402 general chemistryG-quadruplex01 natural sciencesCofactorCatalysischemistry.chemical_compoundNucleotideG-quartet integrity[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biochemistry [q-bio.BM][SDV.BBM.BC] Life Sciences [q-bio]/Biochemistry Molecular Biology/Biochemistry [q-bio.BM]chemistry.chemical_classificationbiologyG-quadruplex[CHIM.CATA] Chemical Sciences/CatalysisGeneral Medicine[CHIM.CATA]Chemical Sciences/Catalysis021001 nanoscience & nanotechnology0104 chemical sciencesComplementationGuanine surrogatechemistrybiology.proteinBiophysicsG-quadruplex DNAzyme0210 nano-technologyDNAHemin
researchProduct

A Push-Pull Mechanism Helps Design Highly Competent G-Quadruplex-DNA Catalysts

2021

International audience; Massive efforts are currently being invested to improve the performance, versatility, and scope of applications of nucleic acid catalysts. G-quadruplex (G4)/hemin DNAzymes are of particular interest owing to their structural programmability and chemical robustness. However, optimized catalytic efficiency is still bottleneck and the activation mechanism is unclear. Herein, we have designed a series of parallel G4s with different proximal cytosine (dC) derivatives to fine-tune the hemin-binding pocket for G4-DNAzymes. Combining theoretical and experimental methods, we have assessed the dependence of catalytic enhancement on the electronic properties of proximal dCs and…

[SDV.BIO]Life Sciences [q-bio]/BiotechnologyDNAzymeDeoxyribozyme010402 general chemistryG-quadruplex01 natural sciencesCatalysischemistry.chemical_compoundPush–pull mechanismG-quadruplex010405 organic chemistryChemistryMechanism (biology)Robustness (evolution)[CHIM.CATA] Chemical Sciences/CatalysisGeneral Chemistry[CHIM.CATA]Chemical Sciences/CatalysisCombinatorial chemistry0104 chemical sciences[SDV.BIO] Life Sciences [q-bio]/Biotechnology[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistry[CHIM.THEO] Chemical Sciences/Theoretical and/or physical chemistryNucleic acidHeminDNAHeminElectron density
researchProduct