6533b831fe1ef96bd1298ef6

RESEARCH PRODUCT

Southern and fluorescent in situ hybridization detect three RAPD-generated PCR products useful as introgression markers in Petunia

A. BenabdelmounaM. Abirached-darmencyC. HumbertDidier Peltier

subject

0106 biological sciencesIntrogression[SDV.GEN] Life Sciences [q-bio]/GeneticsBiology01 natural sciencesGenome03 medical and health sciencesGene mappingRAPDGeneticsmedicineComputingMilieux_MISCELLANEOUS030304 developmental biologySouthern blotGenomic organizationGenetics0303 health sciences[SDV.GEN]Life Sciences [q-bio]/Geneticsmedicine.diagnostic_testChromosomeGeneral MedicineRAPDAgronomy and Crop Science010606 plant biology & botanyBiotechnologyFluorescence in situ hybridization

description

Fluorescent in situ hybridization (FISH) was used to reveal the intrachromosomal organization of 11 RAPD markers localized on the genetic map of Petunia hybrida. The cloned RAPD markers were analyzed by means of Southern hybridization to determine their level of sequence repetition and their specificity in different Petunia species with 2n=14 and 18 chromosomes. The same probes were then used in FISH experiments. Most of the RAPD clones studied showed high sequence repetition and no species specificity. Moreover, FISH analysis showed that these probes could belong to multilocus families as evidenced by the multiple FISH signals dispersed throughout the genome and present on every chromosome. Only 3 RAPD clones revealed species specificity at the chromosome level. Clones OPJ18-250 and V20-350 were only detected by FISH in the white-flowered species and clone OPV08-600 only in species with colored flowers. They were localized at one two or three pairs of fluorescent sites. The localization of OPJ18-250 at a unique site on chromosome VI give us the opportunity to compare genetic and physical distances.

https://hal.inrae.fr/hal-02683656