6533b85efe1ef96bd12bfdb8
RESEARCH PRODUCT
Genotyping of Campylobacter spp.
Trudy M. WassenaarDiane G. Newellsubject
GenotypeComputational biologyBiologymedicine.disease_causeApplied Microbiology and BiotechnologyRibotypingCampylobacter InfectionsPulsed-field gel electrophoresismedicineAnimalsHumansTypingGenotypingGenotyping TechniquesEcologyCampylobacterCampylobacterMinireviewsbiology.organism_classificationVirologySubtypingBacterial Typing TechniquesCampylobacter coliGenes BacterialFood ScienceBiotechnologydescription
method. The major disadvantages of both of these techniques are the high number of untypeable strains and the time-consuming and technically demanding requirements of the techniques. Production and quality control of antiserum reagents for serotyping schemes are costly; consequently, these reagents are not widely available. A recently developed scheme (23) based on HS antigens in which modified antibody production and antigen detection techniques are used may be an improvement for routine use, but this scheme does not solve the problem of restricted reagent availability or the problem of the high level of nontypeability. Because of such problems, the value of serotyping techniques for national and global epidemiological studies has been restricted. Thus, there is a well-recognized need for alternative subtyping schemes. Recently, molecular subtyping methods have been developed. The major advantage of genotyping techniques is that potentially they could be universally available. Some of these techniques, like ribotyping, pulsed-field gel electrophoresis (PFGE), and flagellin typing (fla typing), are already in use in a number of laboratories (62). In this review we describe the technologies currently available for genotypic subtyping of Campylobacter spp., discuss the advantages and problems of each technique, and indicate the current value of each method.
year | journal | country | edition | language |
---|---|---|---|---|
2000-01-05 | Applied and environmental microbiology |