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RESEARCH PRODUCT

A critical evaluation of Amicon Ultra centrifugal filters for separating proteins, drugs and nanoparticles in biosamples

Ole Kristian BrandtzaegHanne Roberg-larsenTore VehusVanya BogoevaElin JohnsenElsa LundanesOrnela AdemiSteven Ray WilsonJon Hildahl

subject

0301 basic medicineLysisProteomeClinical BiochemistryPharmaceutical ScienceCentrifugationFractionationChemical Fractionation01 natural sciencesAnalytical Chemistry03 medical and health sciencesTandem Mass SpectrometryLiquid chromatography–mass spectrometryDrug DiscoveryCentrifugationSpectroscopyMolar massAqueous solutionChromatographyChemistry010401 analytical chemistryProteinsSmall molecule0104 chemical sciencesMolecular Weight030104 developmental biologyPharmaceutical PreparationsProteomeSolventsNanoparticlesChromatography Liquid

description

Amicon(®) Ultra centrifugal filters were critically evaluated for various sample preparations, namely (a) proteome fractionation, (b) sample cleanup prior to liquid chromatography mass spectrometry (LC-MS) measurement of small molecules in cell lysate, and (c) separating drug-loaded nanoparticles and released drugs for accurate release profiling in biological samples. (a) Filters of supposedly differing molar mass (MM) selectivity (10, 30, 50 and 100K) were combined to attempt fractionation of samples of various complexity and concentration. However, the products had surprisingly similar MM retentate/filtrate profiles, and the filters were unsuited for proteome fractionation. (b) Centrifugal filtration was the only clean-up procedure in a FDA-guideline validated LC-MS method for determining anti-tuberculosis agents rifampicin and thioridazine in macrophage cell lysate. An additional organic solvent washing step (drug/protein-binding disruption) was required for satisfactory recovery. (c) The centrifugation filters are well suited for separating drugs and nanoparticles in simple aqueous solutions, but significantly less so for biological samples, as common drug-protein binding disruptors can dissolve NPs or be incompatible with LC-MS instrumentation.

https://doi.org/10.1016/j.jpba.2015.12.010