Search results for " Basic"

showing 10 items of 10515 documents

Human malignant mesothelioma is recapitulated in immunocompetent BALB/c mice injected with murine AB cells

2016

Malignant Mesothelioma is a highly aggressive cancer, which is difficult to diagnose and treat. Here we describe the molecular, cellular and morphological characterization of a syngeneic system consisting of murine AB1, AB12 and AB22 mesothelioma cells injected in immunocompetent BALB/c mice, which allows the study of the interplay of tumor cells with the immune system. Murine mesothelioma cells, like human ones, respond to exogenous High Mobility Group Box 1 protein, a Damage-Associated Molecular Pattern that acts as a chemoattractant for leukocytes and as a proinflammatory mediator. The tumors derived from AB cells are morphologically and histologically similar to human MM tumors, and res…

Mesothelioma0301 basic medicinePathologymedicine.medical_specialtyLung NeoplasmsAntineoplastic AgentsPemetrexedHMGB1DeoxycytidineArticleProinflammatory cytokineBALB/c03 medical and health sciences0302 clinical medicineImmune systemMalignant MesotheliomCell Line TumormedicineMesothelioma HMGB1 in vivo imagingcancerAnimalsHumansMesotheliomaHMGB1 ProteinCisplatinMice Inbred BALB CMultidisciplinarybiologybusiness.industryMesothelioma Malignantbiology.organism_classificationmedicine.diseaseSurvival AnalysisGemcitabine030104 developmental biologyPemetrexedCell culturemesothelioma030220 oncology & carcinogenesisbiology.proteinFemaleCisplatinBALB/cbusinessImmunocompetenceNeoplasm Transplantationmedicine.drug
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2015

Myelin basic proteins (MBP) are major constituents of the myelin sheath in the central nervous system (CNS) and the peripheral nervous system (PNS). In the CNS Mbp translation occurs locally at the axon-glial contact site in a neuronal activity-dependent manner. Recently we identified the small non-coding RNA 715 (sncRNA715) as a key inhibitor of Mbp translation during transport in oligodendrocytes. Mbp mRNA localization in Schwann cells has been observed, but has not been investigated in much detail. Here we could confirm translational repression of Mbp mRNA in Schwann cells. We show that sncRNA715 is expressed and its levels correlate inversely with MBP in cultured Schwann cells and in th…

Messenger RNAMultidisciplinaryCellular differentiationSchwann cellBiologyMolecular biologyMyelin basic proteinMyelinmedicine.anatomical_structurenervous systemCell culturePeripheral nervous systemmedicineProtein biosynthesisbiology.proteinPLOS ONE
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The Low Energy-Coupling Respiration in Zymomonas mobilis Accelerates Flux in the Entner-Doudoroff Pathway.

2015

Performing oxidative phosphorylation is the primary role of respiratory chain both in bacteria and eukaryotes. Yet, the branched respiratory chains of prokaryotes contain alternative, low energy-coupling electron pathways, which serve for functions other than oxidative ATP generation (like those of respiratory protection, adaptation to low-oxygen media, redox balancing, etc.), some of which are still poorly understood. We here demonstrate that withdrawal of reducing equivalents by the energetically uncoupled respiratory chain of the bacterium Zymomonas mobilis accelerates its fermentative catabolism, increasing the glucose consumption rate. This is in contrast to what has been observed in o…

Metabolic Processes0301 basic medicineRespiratory chainlcsh:MedicineBiochemistryOxidative PhosphorylationGlucose Metabolismlcsh:ScienceZymomonasMultidisciplinarybiologyOrganic CompoundsSimulation and ModelingMonosaccharidesChemical ReactionsCatabolismAerobiosisEnzymesChemistryBiochemistryPhysical SciencesCarbohydrate MetabolismOxidoreductasesOxidation-ReductionResearch Article030106 microbiologyCarbohydratesAcetaldehydeOxidative phosphorylationResearch and Analysis MethodsZymomonas mobilisElectron Transport03 medical and health sciencesOxidationEntner–Doudoroff pathwayDehydrogenasesOrganic Chemistrylcsh:RChemical CompoundsBiology and Life SciencesProteinsNADbiology.organism_classificationElectron transport chainKineticsGlucoseMetabolismFermentationEnzymologyFermentationlcsh:QFlux (metabolism)BacteriaPLoS ONE
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Impact of Gluten-Friendly Bread on the Metabolism and Function of In Vitro Gut Microbiota in Healthy Human and Coeliac Subjects

2016

The main aim of this paper was to assess the in vitro response of healthy and coeliac human faecal microbiota to gluten-friendly bread (GFB). Thus, GFB and control bread (CB) were fermented with faecal microbiota in pH-controlled batch cultures. The effects on the major groups of microbiota were monitored over 48 h incubations by fluorescence in situ hybridisation. Short-chain fatty acids (SCFAs) were measured by high-performance liquid chromatography (HPLC). Furthermore, the death kinetics of Lactobacillus acidophilus, Bifidobacterium animalis subsp. lactis, Staphylococcus aureus, and Salmonella Typhimurium in a saline solution supplemented with GFB or CB were also assessed. The experiment…

Metabolic Processes0301 basic medicineSalmonellalcsh:MedicineGut floramedicine.disease_causeBiochemistryfluids and secretionsLactobacillus acidophilusMedicine and Health Scienceslcsh:ScienceBifidobacteriumchemistry.chemical_classificationMultidisciplinaryMicrobiotafood and beveragesBreadGenomicsBifidobacterium animalisSolutionsMedical MicrobiologyStaphylococcus aureusPhysical SciencesBiological CulturesBatch CultureResearch ArticleCell Culturing TechniquesGlutensMaterials by StructureMaterials Science030106 microbiologyMicrobial GenomicsAqueous SolutionsIn Vitro TechniquesBiologyResearch and Analysis MethodsMicrobiologydigestive systemMicrobiologyExtremophiles03 medical and health sciencesGeneticsmedicineHumansMicrobiomeNutritionBacteriaGut BacteriaEcology and Environmental Scienceslcsh:ROrganismsBiology and Life SciencesProteinsbiology.organism_classificationGlutenDietCeliac DiseaseMetabolismchemistryFoodMixturesCase-Control StudiesFermentationlcsh:QBifidobacteriumMicrobiomeSaline SolutionsGlutenPLOS ONE
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ADAM10, myelin-associated metalloendopeptidase

2013

Publisher Summary This chapter discusses the structural chemistry and the biological aspects of ADAM10. Originally, ADAM10 was characterized as a myelin-associated metalloproteinase. After cloning the bovine ADAM10 cDNA, the deduced amino acid sequence indicated that the enzyme belonged to the reprolysin subfamily and therefore was named MADM (mammalian disintegrin metalloprotease). The mammalian reprolysin subfamily has been named ADAM (a disintegrin and metalloproteinase) and MADM has been designated ADAM10. The ADAM10 homologs in Drosophila melanogaster and Caenorhabditis elegans are named kuzbanian and sup-17, respectively. The enzymatic activity of isolated ADAM10 can be monitored in v…

MetalloproteinaseSubfamilybiologyChemistryADAM10Cell biologyMyelin basic proteinMyelinmedicine.anatomical_structureBiochemistrymedicinebiology.proteinDisintegrinAmyloid precursor proteinMetalloendopeptidasePeptide sequence
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Mitochondrial dynamics in type 2 diabetes: Pathophysiological implications

2017

Mitochondria play a key role in maintaining cellular metabolic homeostasis. These organelles have a high plasticity and are involved in dynamic processes such as mitochondrial fusion and fission, mitophagy and mitochondrial biogenesis. Type 2 diabetes is characterised by mitochondrial dysfunction, high production of reactive oxygen species (ROS) and low levels of ATP. Mitochondrial fusion is modulated by different proteins, including mitofusin-1 (MFN1), mitofusin-2 (MFN2) and optic atrophy (OPA-1), while fission is controlled by mitochondrial fission 1 (FIS1), dynamin-related protein 1 (DRP1) and mitochondrial fission factor (MFF). PARKIN and (PTEN)-induced putative kinase 1 (PINK1) partici…

MiD51 mitochondrial dynamics proteins of 51 kDaΔΨm mitochondrial membrane potential0301 basic medicineMitochondrial fission factorClinical BiochemistryMitochondrial DegradationMFN2Review ArticleTXNIP thioredoxin interacting proteinMitochondrial DynamicsBiochemistryAdenosine TriphosphateGRP78 78 kDa glucose-regulated proteinMFF mitochondrial fission factorMFN2 mitofusin 2TRX2 thioredoxin 2Redox biologylcsh:QH301-705.5NF-κB nuclear factor kappa Blcsh:R5-920MitophagyType 2 diabetesDRP1 dynamin-related protein 1FIS1 fission protein 1BNIP3 BCL2/adenovirus E1B 19 kDa interacting protein 3MitochondriaOPA1 optic atrophy 1SIRT1/3 sirtuin 1/3Biochemistrymitochondrial fusionTGF-β1 transforming growth factor-β1Mitochondrial fissionOMM outer mitochondrial membranelcsh:Medicine (General)MiD49 mitochondrial dynamics proteins of 49Nox 4 NADPH oxidase-4IMM inner mitochondrial membraneFIS1ATF6 activating transcription factor 6PINK1mTOR mammalian target of rapamycinCHOP C/EBP homologous proteinBiologymdivi-1 mitochondrial division inhibitor-1Mitochondrial Proteins03 medical and health sciencesROS reactive oxygen speciessXBP1 spliced X-box binding protein 1UCP-1 uncoupling protein-1MFN1 mitofusin 1SOD superoxide dismutaseLC3 1 A/1B-light chain 3HumansPINK1 (PTEN)-induced putative kinase 1S3 15-OxospiramilactoneOrganic ChemistrymtDNA mitochondrial DNAAMPK AMP-activated protein kinase030104 developmental biologyDiabetes Mellitus Type 2Mitochondrial biogenesislcsh:Biology (General)Oxidative stressp38 MAPK p38 mitogen-activated protein kinasep62/SQSTM1 ubiquitin and sequestosome-1Reactive Oxygen SpeciesRedox Biology
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The thiol switch C684 in Mitofusin-2 mediates redox-induced alterations of mitochondrial shape and respiration

2017

Mitofusin-2 (MFN2) is a GTPase in the outer mitochondrial membrane involved in the regulation of mitochondrial fusion and bioenergetics. MFN2 also plays a role in mitochondrial fusion induced by changes in the intracellular redox state. Adding oxidized glutathione (GSSG), the core cellular stress indicator, to mitochondrial preparations stimulates mitochondrial fusion by inducing disulphide bond-mediated oligomer formation of MFN2 and its homolog MFN1 which involve cysteine 684 (C684) of MFN2. Mitochondrial hyperfusion represents an adaptive stress response that confers transient protection by increasing mitochondrial ATP production but how this depends on the thiol switch C684 in MFN2 has …

Mice Knockout0301 basic medicineCell RespirationMFN2Cell BiologyOxidative phosphorylationMitochondrionBiologyMitochondrial apoptosis-induced channelGTP PhosphohydrolasesMitochondriaCell biologyMice03 medical and health sciencesCellular and Molecular NeuroscienceMitofusin-2030104 developmental biologymitochondrial fusionAnimalsMFN1Sulfhydryl CompoundsATP–ADP translocaseCell ShapeOxidation-ReductionCells CulturedNeurochemistry International
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Wip1 inhibition leads to severe pro-inflammatory phenotype in skin in response to chemical irritation

2016

Mice Knockout0301 basic medicinebusiness.industryDermatologyBiologyDermatitis Contactmedicine.disease_causeBiochemistryPhenotypeMice Inbred C57BLProtein Phosphatase 2C03 medical and health sciences030104 developmental biology0302 clinical medicineText mining030220 oncology & carcinogenesisImmunologymedicineAnimalsTetradecanoylphorbol AcetateIrritationbusinessMolecular BiologySkinJournal of Dermatological Science
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Automatic Biological Cell Counting Using a Modified Gradient Hough Transform

2017

AbstractWe present a computational method for pseudo-circular object detection and quantitative characterization in digital images, using the gradient accumulation matrix as a basic tool. This Gradient Accumulation Transform (GAT) was first introduced in 1992 by Kierkegaard and recently used by Kaytanli & Valentine. In the present article, we modify the approach by using the phase coding studied by Cicconet, and by adding a “local contributor list” (LCL) as well as a “used contributor matrix” (UCM), which allow for accurate peak detection and exploitation. These changes help make the GAT algorithm a robust and precise method to automatically detect pseudo-circular objects in a microscop…

Microbiological Techniques0301 basic medicineCountingComputer scienceColony Count Microbial02 engineering and technologyPattern Recognition AutomatedHough transformlaw.inventionAutomation03 medical and health sciencesMatrix (mathematics)Digital imageCirclelawYeasts[SDV.IDA]Life Sciences [q-bio]/Food engineeringImage Processing Computer-AssistedMicroscopic imageInstrumentationMicroscopybusiness.industryClinical Coding[ SDV.IDA ] Life Sciences [q-bio]/Food engineeringPattern recognition021001 nanoscience & nanotechnologyObject detectionPeak detection030104 developmental biologyCoughSaccharomycetalesImagesBiological cellArtificial intelligenceCell0210 nano-technologybusinessAlgorithmsPhase coding
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Post-mortem microbiology in sudden death: sampling protocols proposed in different clinical settings

2019

Abstract Background Autopsies, including minimally invasive autopsies, are a powerful tool for determination of the cause of death. When a patient dies from an infection, microbiology is crucial to identify the causative organism. Post-mortem microbiology (PMM) aims to detect unexpected infections causing sudden deaths; confirm clinically suspected but unproven infection; evaluate the efficacy of antimicrobial therapy; identify emergent pathogens; and recognize medical errors. Additionally, the analysis of the thanatomicrobiome may help to estimate the post-mortem interval. Aims The aim was to provide advice in the collection of PMM samples and to propose sampling guidelines for microbiolog…

Microbiological Techniques0301 basic medicineMicrobiology (medical)030106 microbiologyMEDLINEContext (language use)Clinical settingsSudden deathSpecimen HandlingMicrobiologyDeath Sudden03 medical and health sciences0302 clinical medicineClinical historyHumansMedicine030212 general & internal medicineComputingMilieux_MISCELLANEOUSCause of deathAntiinfective agentbusiness.industrySampling (statistics)General Medicine3. Good healthInfectious Diseases[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyAutopsybusiness
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