Search results for " Mark"

showing 10 items of 4118 documents

Estimating the genetic diversity and structure ofQuercus trojanaWebb populations in Italy by SSRs: implications for management and conservation

2017

Studying the genetic diversity and structure of the current forest populations is essential for evaluating the ability to survive to future biotic and abiotic changes and planning conservation strategies. Quercus trojana is an eastern Mediterranean tree species with a fragmented distribution range, and its westernmost outposts are located in southern Italy. The demand for timber and cropland over the centuries has severely reduced it s occurrence in this part of the range. We assessed the genetic diversity and structure of the extant Italian populations of Q. trojana and derived conservation guidelines. A total of 322 samples were genotyped with six polymorphic nuclear microsatellite marker…

0106 biological sciences0301 basic medicineSettore AGR/05 - Assestamento Forestale E SelvicolturaQuercus trojana Genetic diversity Population structure SSRs markers ConservationQuercus trojanaRange (biology)PopulationConservationPopulation structure010603 evolutionary biology01 natural sciencesGenetic diversity03 medical and health sciencesQuercus trojanaeducationAbiotic componentQuercus trojana diversité génétique structure de populations marqueurs SSRs conservationGlobal and Planetary ChangeGenetic diversityeducation.field_of_studySSRs markersEcologybiologyEcologyForestrybiology.organism_classification030104 developmental biologyMicrosatelliteGene poolSpecies richnessCanadian Journal of Forest Research
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Widespread plant specialization in the polyphagous planthopper Hyalesthes obsoletus (Cixiidae), a major vector of stolbur phytoplasma: Evidence of cr…

2018

The stolbur phytoplasma vector Hyalesthes obsoletus is generally considered as a polyphagous species associated with numerous wild and cultivated plants. However, recent research in southeastern Europe, the distribution centre of H. obsoletus and the area of most stolbur-inflicted crop diseases, points toward specific host-plant associations of the vector, indicating specific vector-based transmission routes. Here, we study the specificity of populations associated with four host-plants using mitochondrial and nuclear genetic markers, and we evaluate the evolution of host-shifts in H. obsoletus. Host-plant use was confirmed for Convolvulus arvensis, Urtica dioica, Vitex agnus-castus and Cre…

0106 biological sciences0301 basic medicineSympatryHereditySpeciationlcsh:MedicineDisease Vectors01 natural sciencesBiochemistryGeographical LocationsHyalestheslcsh:SciencePhylogenyEnergy-Producing OrganellesMultidisciplinarybiologyGeographyEcologyCixiidaeMitochondrial DNAMitochondriaEuropeNucleic acidsSympatryGenetic MappingPhylogeographyBiogeographySympatric speciationHost-Pathogen InteractionsCellular Structures and OrganellesResearch ArticleGenetic MarkersSpecies complexPhytoplasmaEvolutionary ProcessesEcological MetricsForms of DNAZoologyBioenergetics010603 evolutionary biologyHemiptera03 medical and health sciencesPlanthopperGenetic variationCryptic SpeciationGeneticsAnimalsPlant DiseasesEvolutionary BiologyPopulation Biologylcsh:REcology and Environmental SciencesBiology and Life SciencesSpecies DiversityDNACell Biology15. Life on landbiology.organism_classificationInsect Vectors030104 developmental biologyHaplotypesGenetic markerGenome MitochondrialPeople and PlacesEarth Scienceslcsh:QPopulation Genetics
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In vitro propagation of the relict laperinne’s olive (Olea europaea L. subsp. laperrinei)

2017

Olea europaea L. subsp. laperrinei (Oleaceae) is an endemic taxon of the mountainous regions of central Sahara, consisting of currently fragmented and small relict populations. The tree can propagate vegetatively or by seed, but no recent natural regeneration was observed in the Algerian massive populations, some of which are considered threatened with extinction. Sterile triploid individuals were also identified in some populations showing increasing vigour. As a result of its long persistence and despite its rarity, the Laperrine's olive is an iconic component of Saharan mountain ecosystems. The aim of this study is to develop an efficient micropropagation protocol for both diploid and tr…

0106 biological sciences0301 basic medicinemicropropagationmolecular markerstriploidsPlant ScienceEndangered taxonolive tree01 natural sciences03 medical and health scienceschemistry.chemical_compoundMurashige and Skoog mediumBotanyEcology Evolution Behavior and Systematicsbiologyfungifood and beveragesbiology.organism_classificationthreatened germplasm030104 developmental biologyTaxonMicropropagationchemistryOleaOleaceaeShootThreatened speciesZeatin010606 plant biology & botany
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Can we rely on selected genetic markers for population identification? Evidence from coastal Atlantic cod

2018

Abstract The use of genetic markers under putative selection in population studies carries the potential for erroneous identification of populations and misassignment of individuals to population of origin. Selected markers are nevertheless attractive, especially in marine organisms that are characterized by weak population structure at neutral loci. Highly fecund species may tolerate the cost of strong selective mortality during early life stages, potentially leading to a shift in offspring genotypes away from the parental proportions. In Atlantic cod, recent genetic studies have uncovered different genotype clusters apparently representing phenotypically cryptic populations that coexist i…

0106 biological sciences0301 basic medicinestatistical assignmentPopulationPopulation geneticsZoology010603 evolutionary biology01 natural sciences03 medical and health sciencesGenotypemarine fisheseducationEcology Evolution Behavior and SystematicsSelection (genetic algorithm)Original ResearchNature and Landscape Conservationeducation.field_of_studyNatural selectionEcologybiologypopulation geneticsnatural selectionPelagic zonebiology.organism_classification030104 developmental biologyGenetic markerpopulation of originAtlantic codEcology and Evolution
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Embryonic survival and larval predator-avoidance ability in mutually ornamented whitefish

2011

Mutual ornamentation (i.e. the expression of secondary sexual characters) in both sexes is a relatively common but rarely studied phenomenon in the animal kingdom. In the present study, we investigated whether mutual ornamentation is indicative of offspring embryonic survival and predator-avoidance ability in whitefish. We crossed ten randomly selected females and ten randomly selected males in all possible combinations resulting in 100 sib groups, and hypothesized that fitness (measured as offspring survival) of elaborately ornamented parents would be higher in both sexes of whitefish. Parental effects were found in both studied traits: effects of female and female–male interaction were si…

0106 biological sciences0303 health sciencesLarvaReproductive successOffspringEcologyMaternal effectZoologyBiology010603 evolutionary biology01 natural sciences03 medical and health sciencesMate choiceGenetic markerSexual selectionPredatorEcology Evolution Behavior and Systematics030304 developmental biologyBiological Journal of the Linnean Society
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Genetic relationships between Sicilian wild populations of Brassica analysed with RAPD markers

2001

Brassica comprises very variable species, both morphologically and genetically. Among these species, the Sicilian populations of Brassica sect. Brassica, species related to kale crops form a complex group. The genetic relationships among 15 populations occurring in Sicily and one from Calabria, representing the existing diversity, have been investigated using random amplified polymorphic DNA (RAPD) markers. This assay, carried out with 22 arbitrary primers, generated 236 polymorphic fragments, 21 of which were specific for single populations (mainly Brassica insularis, Brassica incana and Brassica macro-carpa). Jaccard's genetic distances were computed and the phylogenic tree was establishe…

0106 biological sciencesBrassicaPopulation geneticsPlant Science01 natural sciences03 medical and health sciencesRAPDBotanyGenetics[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BV] Life Sciences [q-bio]/Vegetal BiologyGenetic variabilityComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesbiologyDendrogramUPGMAAMELIORATION DES PLANTESGENETIQUE15. Life on landbiology.organism_classificationRAPDGenetic distanceGenetic markerTAXINOMIEAgronomy and Crop Science010606 plant biology & botanyPlant Breeding
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Revision: Indicadores del deterioro de la calidad proteica y del valor nutritivo de la leche / Review: Indicators of damage of protein quality and nu…

1999

The nutritional value of milk can be negatively affected by thermal treatments. The quality of the proteins can be modified as a consequence of a set of reactions, the most important of which are the interactions between protein and carbohydrates, also known as Maillard reactions. These reactions can also occur when the storage conditions of moisture and temperature are unfavorable. The differ ent thermal treatments involved in processing milk (pasteurization, sterilization, drying, etc.) lead to different steps of the Maillard reaction and therefore to the formation of different compounds that can be useful as chemical markers of milk alteration, or more exactly of protein alteration. Est…

0106 biological sciencesChemistryGeneral Chemical Engineeringfood and beveragesPasteurization04 agricultural and veterinary sciences040401 food science01 natural sciencesIndustrial and Manufacturing Engineeringlaw.inventionMaillard reactionsymbols.namesake0404 agricultural biotechnologyChemical markerlaw010608 biotechnologysymbolsFood scienceProtein qualityFood ScienceFood Science and Technology International
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A novel method to predict dark diversity using unconstrained ordination analysis

2019

[Questions] Species pools are the product of complex ecological and evolutionary mechanisms, operating over a range of spatial scales. Here, we focus on species absent from local sites but with the potential to establish within communities — known as dark diversity. Methods for estimating dark diversity are still being developed and need to be compared, as well as tested for the type, and amount, of reference data needed to calibrate these methods. [Location] South Bohemia (48°58′ N, 14°28′ E) and Železné Hory (49°52′ N, 15°34′ E), Czech Republic. [Method] We compared a widely accepted algorithm to estimate species pools (Beals smoothing index, based on species co-occurrence) against a nove…

0106 biological sciencesEcologyReference data (financial markets)Species poolCommunity structureBeals smoothing indexPlant Science010603 evolutionary biology01 natural sciencesCommunity structureEllenberg valuesUnconstrained ordinationCommon speciesDark diversityStatisticsRange (statistics)OrdinationScale (map)Nested sampling algorithmSmoothing010606 plant biology & botanyMathematics
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Forecasting ocean warming impacts on seabird demography: a case study on the European storm petrel

2016

Bottom-up climatic forcing has been shown to be influential for a variety of marine taxa, but evidence on seabird populations is scarce. Seasonal variation in environmental conditions can have an indirect effect on subsequent reproduction, which, given the longevity and single-brooding of seabirds, may affect population dynamics. Our study focuses on linking the effect of oceanographic conditions (from 1991 to 2013) to the fecundity and consequently pop - ulation growth rate of the Mediterranean subspecies of the European storm petrel Hydrobates pelagicus melitensis. In this study, we examined 23 yr of > 5400 capture–mark−recaptures (CMR) and modelled the probability of skipping reproductio…

0106 biological sciencesEcologybiologyEcology010604 marine biology & hydrobiologyEffects of global warming on oceansCapture mark recaptureAquatic Sciencebiology.organism_classification010603 evolutionary biology01 natural sciencesHydrobates pelagicusOceanographyGeographySettore AGR/11 - Entomologia Generale E Applicatabiology.animalPopulation growthStorm petrelSeabirdCapture−mark−recapture · Environmental stochasticity · Hydrobates pelagicus · Population growth rate · SenescenceEcology Evolution Behavior and Systematics
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Evidence of a highly complex phylogeographic structure on a specialist river bird species, the dipper (Cinclus cinclus)

2008

This study details the phylogeographic pattern of the white-throated dipper (Cinclus cinclus), a Palearctic, temperate, passerine bird that is exclusively associated with flowing water. Our results reveal a complex phylogeographic structure with at least five distinct lineages for the Western Palearctic region. As for many species of the Western Palearctic fauna and flora, this genetic structure is probably linked to the isolation of populations in different southern refuges during glacial periods. Furthermore, the isolation of populations in Scandinavia and/or Eastern regions, but also in Morocco and probably in Corsica, was accentuated by ecological and biogeographic barriers during Quate…

0106 biological sciencesFauna[SDV]Life Sciences [q-bio]Settore BIO/05 - ZoologiaSubspecies01 natural sciencesPHYLOGEOGRAPHYIce ageGlacial periodPasseriformesPhylogenyComputingMilieux_MISCELLANEOUS0303 health scienceseducation.field_of_studyLikelihood FunctionsGLACIAL REFUGEbiologyGeographyEcologyGLACIATION QUATERNAIRECytochromes bMitochondriaEuropeGenes MitochondrialInterglacialCinclus cinclus; Glacial refuges; Mitochondrial DNA; Phylogeography; Quaternary glaciations; TaxonomyMITOCHONDRIAL DNAGenetic MarkersCinclus cincluPopulation010603 evolutionary biologyDNA MitochondrialEvolution Molecular03 medical and health sciencesGeneticsAnimalseducationMolecular BiologyEcology Evolution Behavior and Systematics030304 developmental biology[SDV.GEN]Life Sciences [q-bio]/GeneticsGenetic VariationSequence Analysis DNA15. Life on landTAXONOMYbiology.organism_classificationPhylogeographyGenetics PopulationCINCLUS CINCLUSCinclus cinclusQUATERNARY GLACIATIONSequence Alignment
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