Search results for " Outbreak"

showing 10 items of 640 documents

Microsatellite-based genotyping of Candida parapsilosis sensu stricto isolates reveals dominance and persistence of a particular epidemiological clon…

2012

In this study, using multilocus microsatellite analysis, we report the genetic characterization of 27 Candida parapsilosis isolates recovered in two different periods of time (2007-2009 and 2011-2012) from infants hospitalized in the neonatal intensive care unit of a hospital in Messina, Italy. The results revealed the persistence and dominance of a particular infectious genotype among NICU patients and highlight the power of the used microsatellite markers in clarifying epidemiologic associations, detect micro-evolutionary variations and facilitating the recognition of outbreaks. © 2012 Elsevier B.V.

Microbiology (medical)medicine.medical_specialtyCandida parapsilosisNeonatal intensive care unitGenotypeSettore MED/17 - Malattie InfettiveInfectious DiseaseCandida parapsilosisMicrobiologyDisease OutbreaksCandida orthopsilosisGeneticCandida orthopsilosiIntensive Care Units NeonatalEpidemiologyGenotypeGeneticsmedicineHumansMolecular BiologyGenotypingEcology Evolution Behavior and SystematicsCandidaDominance (genetics)ITS-sequencingGeneticsCross InfectionDisease OutbreakbiologyCandidiasisInfant NewbornOutbreakCandida metapsilosisbiology.organism_classificationCandida parapsilosis; Candida orthopsilosis; Candida metapsilosis; Molecular epidemiology; ITS-sequencing; Microsatellite genotypingEcology Evolution Behavior and SystematicCandida metapsilosiInfectious DiseasesMolecular epidemiologyCandidiasiCandida parapsilosiMicrosatellite RepeatMicrosatelliteMicrosatellite genotypingMicrosatellite RepeatsHumanMultilocus Sequence TypingInfection, Genetics and Evolution
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The socio-ecology of zoonotic infections

2011

The resurgence of infectious diseases of zoonotic origin observed in recent years imposes a major morbidity/mortality burden worldwide, and also a major economic burden that extends beyond pure medical costs. The resurgence and epidemiology of zoonoses are complex and dynamic, being influenced by varying parameters that can roughly be categorized as human-related, pathogen-related, and climate/environment-related; however, there is significant interplay between these factors. Human-related factors include modern life trends such as ecotourism, increased exposure through hunting or pet owning, and culinary habits, industrialization sequelae such as farming/food chain intensification, globali…

Microbiology (medical)medicine.medical_specialtyDisease reservoirSettore MED/17 - Malattie InfettiveClimate ChangeEmergenceReviewDiseaseBiologyCommunicable Diseases EmergingClimate changes; Ecology; Emergence; Outbreak; Review; Zoonotic infections; Agriculture; Animals; Climate Change; Communicable Disease Control; Communicable Diseases Emerging; Disease Reservoirs; Emigration and Immigration; Humans; Travel; Zoonoses; Microbiology (medical); Infectious DiseasesClimate changesGlobalizationZoonosesUrbanizationmedicineAnimalsHumansZoonoseDisease ReservoirsTravelEcologyZoonotic InfectionAnimalEcologyPublic healthZoonotic infectionOutbreakAgricultureGeneral MedicineEmigration and Immigrationzoonotic infectionsIndustrialisationInfectious DiseasesEcotourismCommunicable Disease ControlDisease ReservoirHuman
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Live genomics for pathogen monitoring in public health.

2014

Whole genome analysis based on next generation sequencing (NGS) now represents an affordable framework in public health systems. Robust analytical pipelines of genomic data provides in a short lapse of time (hours) information about taxonomy, comparative genomics (pan-genome) and single polymorphisms profiles. Pathogenic organisms of interest can be tracked at the genomic level, allowing monitoring at one-time several variables including: epidemiology, pathogenicity, resistance to antibiotics, virulence, persistence factors, mobile elements and adaptation features. Such information can be obtained not only at large spectra, but also at the “local” level, such as in the event of a recurrent …

Microbiology (medical)medicine.medical_specialtylcsh:MedicineVirulenceGenomicscomparative genomicsBiologyGenomeDNA sequencingArticleresistancemedicineImmunology and AllergyMolecular Biologypathogens outbreaks; pan-genome; comparative genomics; bioinformatics; resistance; public healthComparative genomicsGeneral Immunology and MicrobiologyPublic healthlcsh:Rpublic healthPan-genomebioinformaticsData scienceInfectious Diseasespathogens outbreaksData qualitypan-genomePathogens (Basel, Switzerland)
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Molecular Epidemiology of Caliciviruses Causing Outbreaks and Sporadic Cases of Acute Gastroenteritis in Spain

2002

ABSTRACT The molecular epidemiology of human caliciviruses (HuCVs) causing sporadic cases and outbreaks of acute gastroenteritis around eastern Spain (Catalonia and the Valencian Community) was studied by reverse transcription-PCR (RT-PCR) and by sequencing part of the RNA polymerase gene in open reading frame 1. HuCVs were detected in 44 of 310 stool specimens (14.19%) negative for other enteric pathogens obtained from children with acute gastroenteritis. Norwalk-like viruses (NLVs) were the most common cause of the gastroenteritis outbreaks investigated here. They were detected in 14 out of 25 (56%) outbreaks with an identified pathogen. Genotypes producing both sporadic cases and outbrea…

Microbiology (medical)virusesMolecular Sequence DataBiologySapovirusVirusDisease Outbreakslaw.inventionlawVirologyGenotypeHumansPathogenGenePhylogenyPolymerase chain reactionFecesCaliciviridae InfectionsMolecular EpidemiologyMolecular epidemiologyReverse Transcriptase Polymerase Chain ReactionNorovirusOutbreakDNA-Directed RNA PolymerasesSequence Analysis DNAVirologyGastroenteritisSpainChild PreschoolAcute DiseaseCaliciviridaeJournal of Clinical Microbiology
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Correction to ‘Secondary structure determination of conserved SARS-CoV-2 RNA elements by NMR spectroscopy’

2021

The current pandemic situation caused by the Betacoronavirus SARS-CoV-2 (SCoV2) highlights the need for coordinated research to combat COVID-19. A particularly important aspect is the development of medication. In addition to viral proteins, structured RNA elements represent a potent alternative as drug targets. The search for drugs that target RNA requires their high-resolution structural characterization. Using nuclear magnetic resonance (NMR) spectroscopy, a worldwide consortium of NMR researchers aims to characterize potential RNA drug targets of SCoV2. Here, we report the characterization of 15 conserved RNA elements located at the 5' end, the ribosomal frameshift segment and the 3'-un…

Models Molecular2019-20 coronavirus outbreakMagnetic Resonance SpectroscopyCoronavirus disease 2019 (COVID-19)AcademicSubjects/SCI00010Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)Genome ViralBiology03 medical and health sciencesGeneticsHumans3' Untranslated RegionsPandemicsProtein secondary structure030304 developmental biology0303 health sciencesBase SequenceSARS-CoV-2030302 biochemistry & molecular biologyCOVID-19Frameshifting RibosomalRNANuclear magnetic resonance spectroscopyVirologyNucleic Acid ConformationRNA ViralCorrigendumNucleic Acids Research
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Aerosols generation using Er,Cr:YSGG laser compared to rotary instruments in conservative dentistry: A preliminary study

2021

Background In restorative dentistry, the use of high-speed air turbine, which generates aerosols, can be associated with the transmission of airborne diseases. New laser technologies could be useful in reducing the amount of aerosols, but there is a lack of scientific research on this topic. Material and methods This is a descriptive study to analyze the amount of aerosols produced after class I cavity preparation using high-speed air turbine (group 1) and Er,Cr:YSGG laser with two different parameters (groups 2 and 3). Fluorescein dye was incorporated into the coolant reservoir in order to visualize the production of aerosols during each procedure. Tooth preparation was performed in a typo…

Molar2019-20 coronavirus outbreakLàsers en odontologiaMaterials scienceCoronavirus disease 2019 (COVID-19)Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)Restauració dentalDentistrylaw.inventionOperative Dentistry and Endodontics03 medical and health sciences0302 clinical medicinelaw030212 general & internal medicineRestorative dentistryGeneral DentistryUNESCO:CIENCIAS MÉDICASAerosolsTypodontbusiness.industrySARS-CoV-2Research030206 dentistryContaminationLaserDental RestorationLasers in dentistrybusinessJournal of Clinical and Experimental Dentistry
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Diversity of human rotaviruses detected in Sicily, Italy, over a 5-years period (2001-2005).

2007

It is well known that the death of dopaminergic neurons of the substantia nigra pars compacta (SNc) is the pathological hallmark of Parkinson's disease (PD), the second most common and disabling condition in the expanding elderly population. Nevertheless, the intracellular cascade of events leading to dopamine cell death is still unknown and, consequently, treatment is largely symptomatic rather than preventive. Moreover, the mechanisms whereby nigral dopaminergic neurons may degenerate still remain controversial. Hitherto, several data have shown that the earlier cellular disturbances occurring in dopaminergic neurons include oxidative stress, excitotoxicity, inflammation, mitochondrial dy…

Molecular Epidemiologymedicine.medical_specialtySettore MED/07 - Microbiologia E Microbiologia ClinicaGenotypeSettore MED/17 - Malattie InfettivePeriod (gene)InfantGeneral MedicineBiologymedicine.disease_causeVirologyRotavirus InfectionsDisease OutbreaksRotavirus infectionMedical microbiologyrotavirusChild PreschoolVirologyRotavirusmedicineHumansSerotypingAntigens ViralSicily
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Post-Mortem Investigations for the Diagnosis of Sepsis: A Review of Literature

2020

To date, sepsis is still one of the most important causes of death due to the difficulties concerning the achievement of a correct diagnosis. As well as in a clinical context, also in a medico-legal setting the diagnosis of sepsis can reveal challenging due to the unspecificity of the signs detected during autopsies, especially when no ante-mortem clinical data, laboratory, and cultural results are available. Thus, a systematic review of literature was performed to provide an overview of the main available and updated forensic tools for the post-mortem diagnosis of sepsis. Moreover, the aim of this review was to evaluate whether a marker or a combination of markers exist, specific enough to…

Morphology2019-20 coronavirus outbreakmedicine.medical_specialtyHistologyCoronavirus disease 2019 (COVID-19)Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)Clinical BiochemistryContext (language use)ReviewBiochemistryMicrobiology01 natural sciencesSepsis03 medical and health sciences0302 clinical medicineMedicine030216 legal & forensic medicineIntensive care medicineBiochemical markerslcsh:R5-920business.industryPost mortem010401 analytical chemistrysepsis diagnosismedicine.diseaseImmunohistochemistry0104 chemical sciencesInclusion and exclusion criterialcsh:Medicine (General)businessDiagnostics
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Association between climate and new daily diagnoses of COVID-19

2020

AbstractBackgroundAlthough evidence is accumulating that climate conditions may positively or negatively influence the scale of coronavirus disease 2019 (COVID-19) outbreaks, uncertainty remains concerning the real impact of climate factors on viral transmission. Methods. The number of new daily cases of COVID-19 diagnosed in Verona (Italy) was retrieved from the official website of Veneto Region, while information on daily weather parameters in the same area was downloaded from IlMeteo website, a renowned Italian technological company specialized in weather forecasts. The search period ranged between March 1 to November 11, 2020. The number of new daily COVID-19 cases and meteorological da…

Multivariate analysisCoronavirus disease 2019 (COVID-19)Leadership and ManagementStrategy and Management2020. The number of new daily COVID-19 cases and meteorological data in Verona were correlated using both univariate and multivariate analysis. Results: The number of daily COVID-19 diagnoses in Verona was positively associated with the number of days in lockdown and humidity1% decrease in humidityWind speedmin and max temperatureand influence the likelihood or course of local COVID-19 outbreaks. Preventive measuresHealth Information Managementa renowned Italian technological company specialized in weather forecasts. The search period ranged between March 1 and November 11mean air temperature1.2% and 5.4% reduction in new COVID-19 daily diagnoses. A significant difference was observed in values of all-weather parameters recorded in Verona between days with &ltHealth Policy1 km/h increase in wind speed and day with rainfall were independently associated with 1.0%Significant differencehumidityUnivariateOutbreakHumidityand inversely correlated with meanmean wind speed and number of days with rainfall. Days of lockdownwhile information on daily weather parameters in the same area was downloaded from IlMeteo websitetesting policies and hospital preparedness should be reinforced during periods of higher meteorological risk and in local environments with adverse climate conditions.Background: Although evidence is accumulating that climate conditions may positively or negatively influence the scale of coronavirus disease 2019 (COVID-19) outbreaks0.3%uncertainty remains concerning the real impact of climate factors on viral transmission. Methods: The number of new daily cases of COVID-19 diagnosed in Verona (Italy) was retrieved from the official website of Veneto RegionGeography100 or ≥100 new daily COVID-19 diagnoses. Conclusions: Climate conditions may play an essential role in conditions of viral transmissionAir temperaturemean wind speed and number of days with rainfall remained significantly associated in multivariate analysis. The four weather parameters contributed to explaining 61% of variance in new daily COVID-19 diagnoses. Each 1% increase in air temperatureBackground: Although evidence is accumulating that climate conditions may positively or negatively influence the scale of coronavirus disease 2019 (COVID-19) outbreaks uncertainty remains concerning the real impact of climate factors on viral transmission. Methods: The number of new daily cases of COVID-19 diagnosed in Verona (Italy) was retrieved from the official website of Veneto Region while information on daily weather parameters in the same area was downloaded from IlMeteo website a renowned Italian technological company specialized in weather forecasts. The search period ranged between March 1 and November 11 2020. The number of new daily COVID-19 cases and meteorological data in Verona were correlated using both univariate and multivariate analysis. Results: The number of daily COVID-19 diagnoses in Verona was positively associated with the number of days in lockdown and humidity and inversely correlated with mean min and max temperature mean wind speed and number of days with rainfall. Days of lockdown mean air temperature humidity mean wind speed and number of days with rainfall remained significantly associated in multivariate analysis. The four weather parameters contributed to explaining 61% of variance in new daily COVID-19 diagnoses. Each 1% increase in air temperature 1% decrease in humidity 1 km/h increase in wind speed and day with rainfall were independently associated with 1.0% 0.3% 1.2% and 5.4% reduction in new COVID-19 daily diagnoses. A significant difference was observed in values of all-weather parameters recorded in Verona between days with <100 or ≥100 new daily COVID-19 diagnoses. Conclusions: Climate conditions may play an essential role in conditions of viral transmission and influence the likelihood or course of local COVID-19 outbreaks. Preventive measures testing policies and hospital preparedness should be reinforced during periods of higher meteorological risk and in local environments with adverse climate conditions.DemographyJournal of Hospital Management and Health Policy
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Epidemic spread of ST1-MRSA-IVa in a neonatal intensive care unit, Italy

2012

Abstract Background Community-associated methicillin-resistant Staphylococcus aureus (CA-MRSA) has recently emerged as an important pathogen in neonatal intensive care units (NICUs). The purposes of this study were to characterize methicillin-resistant isolates from an outbreak in a NICU, to examine the genetic traits and clonality of CA-MRSA, and to review the characteristics and outcomes of the neonatal cases and investigate the routes of entry and transmission of the MRSA outbreak strain in the NICU under study. Methods The study NICU practiced an active surveillance program for multidrug-resistant organisms, including weekly cultures for detection of MRSA from nasal swabs among all the …

NICUMaleMethicillin-Resistant Staphylococcus aureusPediatricsmedicine.medical_specialtyMRSA intensive care unitNeonatal intensive care unitEpidemiologyCA-MRSAMicrobial Sensitivity Testsmedicine.disease_causeStaphylococcal infectionslaw.inventionDisease OutbreakslawIntensive careIntensive Care Units NeonatalmedicineInfection controlHumansPediatrics Perinatology and Child HealthCross InfectionInfection ControlTransmission (medicine)business.industrylcsh:RJ1-570Infant NewbornOutbreaklcsh:PediatricsStaphylococcal Infectionsmedicine.diseaseIntensive care unitMethicillin-resistant Staphylococcus aureusBacterial Typing TechniquesCommunity-Acquired InfectionsItalyPediatrics Perinatology and Child HealthEmergency medicineFemalebusinessResearch ArticleBMC Pediatrics
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