Search results for " Variation"

showing 10 items of 1712 documents

Quaternary diversification in European alpine plants: pattern and process

2004

Molecular clock approaches applied previously to European alpine plants suggest that Primula sect. Auricula , Gentiana sect. Ciminalis and Soldanella diversified at the beginning of the Quaternary or well within this period, whereas Globularia had already started diversifying in the (Late–)Tertiary. In the first part of this paper we present evidence that, in contrast to Globularia and Soldanella , the branching patterns of the molecular internal transcribed spacer phylogenies of both Primula and Gentiana are incompatible with a constant–rates birth–death model. In both of these last two taxa, speciation probably decreased through Quaternary times, perhaps because of some niche–filling pro…

Time FactorsExtinctionGeographyModels GeneticbiologyRange (biology)EcologyGenetic VariationSequence Analysis DNAPlantsbiology.organism_classificationGeneral Biochemistry Genetics and Molecular BiologySoldanellaEuropeEvolution MolecularGlobulariaPrimulaSpecies SpecificityRegression AnalysisGlacial periodGeneral Agricultural and Biological SciencesQuaternaryMolecular clockResearch ArticlePhilosophical Transactions of the Royal Society of London. Series B: Biological Sciences
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Has long-term metal exposure induced changes in life history traits and genetic diversity of the enchytraeid worm Cognettia sphagnetorum (Vejd.)?

2004

We studied whether long-term metal exposure has affected life history traits, population growth patterns and genetic diversity of the asexual enchytraeid worm Cognettia sphagnetorum (Vejd.). Enchytraeids from metal contaminated and uncontaminated forest soil were compared by growing them individually in the laboratory and by following their population development in patchily Cu contaminated microcosms. Genetic differences between the two native populations were studied using allozyme electrophoresis. Individuals from the contaminated site had slower growth rate and they produced fewer fragments of larger size when compared to individuals from the uncontaminated site. In patchily Cu contamin…

Time FactorsGenotypeHealth Toxicology and MutagenesisPopulationBiologyToxicologyLife history theoryGene FrequencyAnimalsBody SizeSoil PollutantsOligochaetaLife historyAlleleeducationAllelesEcosystemClonal diversityeducation.field_of_studyGenetic diversityCognettia sphagnetorumEcologyGenetic VariationEnvironmental ExposureGeneral MedicinePollutionTrace ElementsGenetics PopulationMicrocosmCopperEnvironmental Pollution
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Tracing European Founder Lineages in the Near Eastern mtDNA Pool

2000

Founder analysis is a method for analysis of nonrecombining DNA sequence data, with the aim of identification and dating of migrations into new territory. The method picks out founder sequence types in potential source populations and dates lineage clusters deriving from them in the settlement zone of interest. Here, using mtDNA, we apply the approach to the colonization of Europe, to estimate the proportion of modern lineages whose ancestors arrived during each major phase of settlement. To estimate the Palaeolithic and Neolithic contributions to European mtDNA diversity more accurately than was previously achievable, we have now extended the Near Eastern, European, and northern-Caucasus d…

Time FactorsHaplogroup HLineage (evolution)Extrachromosomal InheritanceBiologyDNA MitochondrialHaplogroupMiddle East03 medical and health sciencesGene FrequencyDemic diffusionGeneticsHumansGenetics(clinical)PhylogenyGenetics (clinical)030304 developmental biologyGenetics0303 health sciences030305 genetics & heredityGenetic VariationGene PoolArticlesHaplogroup L3Emigration and ImmigrationFounder EffectEuropeDatabases as TopicHaplotypesMutagenesisEvolutionary biologyGenealogical DNA testHuman mitochondrial DNA haplogroupFounder effectThe American Journal of Human Genetics
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Respiratory mechanics measured by forced oscillations during mechanical ventilation through a tracheal tube

2011

The forced oscillation technique (FOT) allows the measurement of respiratory mechanics in the intensive care setting. The aim of this study was to compare the FOT with a reference method during mechanical ventilation through a tracheal tube. The respiratory impedance spectra were measured by FOT in nine anaesthetized pigs, and resistance and compliance were estimated on the basis of a linear resistance-compliance inertance model. In comparison, resistance and compliance were quantified by the multiple linear regression analysis (LSF) of conventional ventilator waveforms to the equation of motion. The resistance of the sample was found to range from 6 to 21 cmH(2)O s l(-1) and the compliance…

Time FactorsSwinePhysiologyCoefficient of variationmedicine.medical_treatmentBiomedical EngineeringBiophysicsRespiratory physiologyPulmonary complianceForced Oscillation TechniquePhysiology (medical)Intensive careStatisticsmedicineAnimalsLung ComplianceMathematicsMechanical ventilationbusiness.industryReproducibility of ResultsRepeatabilityReference Standardsrespiratory systemRespiration ArtificialInertanceTracheaRespiratory MechanicsNuclear medicinebusinessPhysiological Measurement
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α-Synuclein expression levels do not significantly affect proteasome function and expression in mice and stably transfected PC12 cell lines

2004

α-Synuclein (α-syn) is a small protein of unknown function that is found aggregated in Lewy bodies, the histopathological hallmark of sporadic Parkinson disease and other synucleinopathies. Mutations in the α-syn gene and a triplication of its gene locus have been identified in early onset familial Parkinson disease. α-Syn turnover can be mediated by the proteasome pathway. A survey of published data may lead to the suggestion that overexpression of α-syn wild type, and/or their variants (A53T and A30P), may produce a decrease in proteasome activity and function, contributing to α-syn aggregation. To investigate the relationship between synuclein expression and proteasome function we have s…

Time Factorsanimal diseasesmedicine.disease_causePC12 CellsBiochemistryMicechemistry.chemical_compoundTransgenesPromoter Regions GeneticMice KnockoutGeneticsMutationInnervationBrainParkinson DiseaseProteasome complexAmyloidosisCell biologyInnervacióalpha-SynucleinAdditions and CorrectionsPèptidsPlasmidsProteasome Endopeptidase ComplexPrionsProtein subunitBlotting WesternImmunoblottingSynucleinsMice TransgenicNerve Tissue ProteinsBiologyTransfectionBacterial ProteinsMultienzyme ComplexesmedicineAnimalsImmunoprecipitationMolecular BiologyAlpha-synucleinSynucleinopathiesEpilepsyWild typeGenetic VariationCell BiologyAxonsRatsnervous system diseasesMice Inbred C57BLEpilèpsiaDisease Models AnimalLuminescent ProteinschemistryProteasomenervous systemSinapsiMutationSynapsesSynucleinAmiloïdosiPeptides
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INTERSPECIFIC VARIATION IN TOTAL PHENOLIC CONTENT IN TEMPERATE BROWN ALGAE

2015

The aim of this study was to focus on interspecific variation of total phenolic contents (TPC) in temperate brown algae also considering their relationship with environmental conditions. In particular, we compared the TPC of four species characterized by different thallus morphology, growth cycle and bathymetric level: Cystoseira amentacea (C. Agardh) Bory, Cystoseira compressa (Esper) Gerloff & Nizamuddin, Dictyopteris polypodioides (A.P. De Candolle) J.V. Lamouroux and Padina pavonica (Linnaeus) Thivy, collected in summer 2011 from the north-western coast of Sicily.

Total phenolic content interspecific variation brown algaeSettore BIO/02 - Botanica SistematicaSettore BIO/04 - Fisiologia Vegetale
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Seasonality in tourism: a critical review of its main measures

2008

The purpose of this study is to estimate the risk of second primary cancer (SPC) in 129 consecutive patients with splenic marginal zone lymphoma (SMZL) diagnosed in three Italian haematological centres. The person-years method deriving as a sum ofproducts ofage- and sex- specific rates and ofthe corresponding time at risk was used. The SPC Standardized Incidence Ratio ISIR) was 2.03 with a 95% confidence interval: [1.05,3.56] (p < 0.05) and the corresponding Absolute Excess Risk (AER) was 145.8 (per 10000 SMZL patients per year). Our findings evidence a high frequency of additional cancers in patients with SMZL and suggest that the incidence rate of SPCs is significantly different from that…

Tourism statisticPatternSeasonal variationAmplitude
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Transcription of human neuronal nitric oxide synthase mRNAs derived from different first exons is partly controlled by exon 1-specific promoter seque…

2006

AbstractThe human neuronal nitric oxide synthase (NOS1) gene is subject to extensive splicing. A total of 12 NOS1 mRNA species have been identified. They differ in their 5′ ends and are derived from 12 different first exons (termed exons 1a to 1l). Various cell lines whose NOS1 first exon expression patterns were representative of human brain, skin, and skeletal muscle were identified. These included A673 neuroepithelioma cells, SK-N-MC neuroblastoma cells, HaCaT keratinocyte-like cells, and C2C12 myocyte-like cells. In these cell lines, correlations were found between the exon 1 variants preferentially expressed and the promoter activities of their cognate 5′ flanking sequences. These data…

Transcription Genetic5' Flanking Region5' flanking regionReporter gene assaysSkeletal muscleNitric Oxide Synthase Type IBiologyKidneyHippocampusCell LineRT real-time PCRExonExon trappingGenes ReporterTestisGeneticsHumansRNA MessengerCloning MolecularLuciferasesPromoter Regions GeneticGeneSkinBinding SitesSplice site mutationReverse Transcriptase Polymerase Chain ReactionAlternative splicingGenetic VariationHeartExonsMolecular biologyAlternative SplicingRNA splicingCortexTandem exon duplicationProtein BindingTranscription FactorsGenomics
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Different mechanisms generating sequence variability are revealed in distinct regions of the hydroxyproline-rich glycoprotein gene from maize and rel…

1992

The sequences of the genes coding for a hydroxyproline-rich glycoprotein from two varieties of maize (Zea mays, Ac1503 and W22), a teosinte (Zea diploperennis) and sorghum (Sorghum vulgare) have been obtained and compared. Distinct patterns of variability have been observed along their sequences. The 500 bp region immediately upstream of the TATA box is highly conserved in the Zea species and contains stretches of sequences also found in the sorghum gene. Further upstream, significant rearrangements are observed, even between the two maize varieties. These observations allow definition of a 5' region, which is common to the four genes and is probably essential for their expression. The 3' e…

Transposable elementGeneticsBase SequenceTATA boxMolecular Sequence DataNucleic acid sequenceIntronGenetic VariationBiologybiology.organism_classificationZea maysZea diploperennisHydroxyprolineMolecular evolutionSequence Homology Nucleic AcidGeneticsCoding regionAmino Acid SequenceMolecular BiologyGeneSequence AlignmentPhylogenyGlycoproteinsPlant ProteinsMoleculargeneral genetics : MGG
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The Norway spruce genome sequence and conifer genome evolution

2013

Conifers have dominated forests for more than 200 million years and are of huge ecological and economic importance. Here we present the draft assembly of the 20-gigabase genome of Norway spruce (Picea abies), the first available for any gymnosperm. The number of well-supported genes (28,354) is similar to the &gt;100 times smaller genome of Arabidopsis thaliana, and there is no evidence of a recent whole-genome duplication in the gymnosperm lineage. Instead, the large genome size seems to result from the slow and steady accumulation of a diverse set of long-terminal repeat transposable elements, possibly owing to the lack of an efficient elimination mechanism. Comparative sequencing of Pinu…

Transposable elementGenome evolutionRNA UntranslatedTranscription GeneticRECOMBINATIONGenomicsGENE FAMILYGenes PlantSEED PLANTSGenomeLONG NONCODING RNASSIZE VARIATIONEvolution MolecularGymnospermBotanyNaturvetenskapGene SilencingRICEPiceaGenome sizePINUSConserved SequenceWhole genome sequencingInternetMultidisciplinarybiologyTerminal Repeat SequencesBiology and Life SciencesPicea abiesGenomicsSequence Analysis DNALINEAGEbiology.organism_classificationIntronsPhenotypeDNA Transposable ElementsTRANSPOSABLE ELEMENTSORYZA-SATIVANatural SciencesGenome Plant
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