Search results for " cell and molecular biology"

showing 10 items of 69 documents

Azulene as a biphenyl mimetic in orexin/hypocretin receptor agonists

2023

Azulene is a rare ring structure in drugs, and we investigated whether it could be used as a biphenyl mimetic in known orexin receptor agonist Nag 26, which is binding to both orexin receptors OX1 and OX2 with preference towards OX2. The most potent azulene-based compound was identified as an OX1 orexin receptor agonist (pEC50 = 5.79 +/- 0.07, maximum response = 81 +/- 8% (s.e.m. of five independent experiments) of the maximum response to orexin-A in Ca2+ elevation assay). However, the azulene ring and the biphenyl scaffold are not identical in their spatial shape and electron distribution, and their derivatives may adopt different binding modes in the binding site. Peer reviewed

Orexin receptorSulfonamidesazuleneOrganic ChemistryClinical BiochemistryAgonistPharmaceutical ScienceMedicinal chemistryBiochemistrylääkekemia317 Pharmacymedicinal chemistrysulfonamidesDrug DiscoveryatsuleeniMolecular Medicine1182 Biochemistry cell and molecular biologyAzulene3111 BiomedicineagonistMolecular Biologyorexin receptor
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Sodium channels enable fast electrical signaling and regulate phagocytosis in the retinal pigment epithelium

2019

Background Voltage-gated sodium (Nav) channels have traditionally been considered a trademark of excitable cells. However, recent studies have shown the presence of Nav channels in several non-excitable cells, such as astrocytes and macrophages, demonstrating that the roles of these channels are more diverse than was previously thought. Despite the earlier discoveries, the presence of Nav channel-mediated currents in the cells of retinal pigment epithelium (RPE) has been dismissed as a cell culture artifact. We challenge this notion by investigating the presence and possible role of Nav channels in RPE both ex vivo and in vitro. Results Our work demonstrates that several subtypes of Nav cha…

PhotoreceptorsPatch-Clamp TechniquesHuman Embryonic Stem CellsfagosytoosiRetinal Pigment EpitheliumSodium ChannelsRetinaBiokemia solu- ja molekyylibiologia - Biochemistry cell and molecular biologyMicePhagocytosisGenetiikka kehitysbiologia fysiologia - Genetics developmental biology physiologyAnimalsHumans3125 Otorhinolaryngology ophthalmologylcsh:QH301-705.5soluviestintä1184 Genetics developmental biology physiology3112 Neurosciences217 Medical engineeringaistinreseptoritMice Inbred C57BLlcsh:Biology (General)Na-vIon channelsproteiinitRPEPatch clampverkkokalvoNeurotieteet - NeurosciencesNavSignal TransductionResearch Article
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Reactive Self-Assembly and Specific Cellular Delivery of NCO-sP(EO-stat-PO)-Derived Nanogels

2018

This study presents the reactive self-assembly of isocyanate functional and amphiphilic six-arm, star-shaped polyether prepolymers in water into nanogels. Intrinsic molecular amphiphilicity, mainly driven by the isophorone moiety at the distal endings of the star-shaped molecules, allows for the preparation of spherical particles with an adjustable size of 100-200 nm by self-assembly and subsequent covalent cross-linking without the need for organic solvents or surfactants. Covalent attachment of a fluorescence dye and either the cell-penetrating TAT peptide or a random control peptide sequence shows that only TAT-labeled nanogels are internalized by HeLa cells. The nanogels thus specifical…

Polymers and Plasticsta221Bioengineering02 engineering and technology010402 general chemistry01 natural sciencesPolyethylene GlycolsBiokemia solu- ja molekyylibiologia - Biochemistry cell and molecular biologyBiomaterialschemistry.chemical_compoundnanogelsDrug Delivery SystemsAmphiphileMaterials ChemistryHumansPolyethyleneimineMoleculeMoietynanopolymeeritreactive self-assemblyPeptide sequenceFluorescent DyesIsophoronegeelitta1182nanobiotekniikka021001 nanoscience & nanotechnologyIsocyanate0104 chemical scienceschemistryCovalent bondBiophysicsNanoparticlesSelf-assembly0210 nano-technologyHeLa CellsBiotechnology
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Anemia prevalence in women of reproductive age in low- and middle-income countries between 2000 and 2018

2021

Anemia is a globally widespread condition in women and is associated with reduced economic productivity and increased mortality worldwide. Here we map annual 2000–2018 geospatial estimates of anemia prevalence in women of reproductive age (15–49 years) across 82 low- and middle-income countries (LMICs), stratify anemia by severity and aggregate results to policy-relevant administrative and national levels. Additionally, we provide subnational disparity analyses to provide a comprehensive overview of anemia prevalence inequalities within these countries and predict progress toward the World Health Organization’s Global Nutrition Target (WHO GNT) to reduce anemia by half by 2030. Our results …

Psychological interventionDiseasesResearch & Experimental MedicineGlobal HealthPrevalence11 Medical and Health Sciencesmedia_commonCHILD GROWTH FAILUREPublic Health Global Health Social Medicine and EpidemiologyAnemiaGeneral MedicineMiddle AgedanemiaPeer reviewIRON-DEFICIENCYNutritional StatuPREGNANCYMedicine Research & ExperimentalScale (social sciences)reproductive age/dk/atira/pure/sustainabledevelopmentgoals/good_health_and_well_beingA990 Medicine and Dentistry not elsewhere classifiedFemalewomenLife Sciences & Biomedicinevulnerable populationsHumanAdultmedicine.medical_specialtyBiochemistry & Molecular BiologyInequalityAdolescentAnemiamedia_common.quotation_subjectMODELSImmunologyNutritional StatusReproductive ageLocal Burden of Disease Anaemia CollaboratorsGeneral Biochemistry Genetics and Molecular BiologyDeveloping CountrieYoung AdultSDG 3 - Good Health and Well-beingEnvironmental healthmedicineLife ScienceHumansDeveloping CountriesPovertyGlobal NutritionPregnancyWereldvoedingScience & Technologybusiness.industryPublic healthCell BiologyGLOBAL BURDENmedicine.diseaseFolkhälsovetenskap global hälsa socialmedicin och epidemiologiRisk factors1182 Biochemistry cell and molecular biology3111 Biomedicinebusiness
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High-Generation Amphiphilic Janus-Dendrimers as Stabilizing Agents for Drug Suspensions

2018

Pharmaceutical nanosuspensions are formed when drug crystals are suspended in aqueous media in the presence of stabilizers. This technology offers a convenient way to enhance the dissolution of poorly water-soluble drug compounds. The stabilizers exert their action through electrostatic or steric interactions, however, the molecular requirements of stabilizing agents have not been studied extensively. Here, four structurally related amphiphilic Janus-dendrimers were synthesized and screened to determine the roles of different macromolecular domains on the stabilization of drug crystals. Physical interaction and nanomilling experiments have substantiated that Janus-dendrimers with fourth gen…

Recrystallization (geology)huumeetPolymers and Plastics116 Chemical sciences02 engineering and technology01 natural sciencesdrugsContact angleMaterials ChemistryHUMAN LECTINSSurface plasmon resonanceta116chemistry.chemical_classificationChemistryBIOLOGICAL-MEMBRANES021001 nanoscience & nanotechnologyPROGRAMMABLE GLYCAN LIGANDSINDOMETHACIN317 PharmacyCLICK CHEMISTRYfarmaseuttinen kemia0210 nano-technologyHydrophobic and Hydrophilic InteractionsDendrimersSURFACEBioengineeringPoloxamer010402 general chemistryRSPOORLY SOLUBLE DRUGBiomaterialsHydrophobic effectSurface-Active AgentsSuspensionslääkeyhdisteetDendrimerAmphiphileGLYCODENDRIMERSOMESta216ta215AlkylMODULAR SYNTHESISWaterPoloxamerCombinatorial chemistry0104 chemical scienceslääkkeet1182 Biochemistry cell and molecular biologypharmaceutical nanosuspensionsCOMPLEX ARCHITECTURESBiomacromolecules
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Outside-host phage therapy as a biological control against environmental infectious diseases

2018

Background Environmentally growing pathogens present an increasing threat for human health, wildlife and food production. Treating the hosts with antibiotics or parasitic bacteriophages fail to eliminate diseases that grow also in the outside-host environment. However, bacteriophages could be utilized to suppress the pathogen population sizes in the outside-host environment in order to prevent disease outbreaks. Here, we introduce a novel epidemiological model to assess how the phage infections of the bacterial pathogens affect epidemiological dynamics of the environmentally growing pathogens. We assess whether the phage therapy in the outside-host environment could be utilized as a biologi…

SI model0301 basic medicinevirusesmedicine.medical_treatmentVIBRIO-CHOLERAEDIVERSITYBacteriophageColumnaris diseasebacteriophageBacteriophageslcsh:QH301-705.5PathogenPOPULATION2. Zero hungerInfectivityeducation.field_of_studyPREDATIONEnvironmental opportunistCHANNEL CATFISHEVOLUTIONARY DYNAMICShost-parasite interactionflavobacteriumModeling and Simulationlcsh:R858-859.7biologinen torjuntaPhage therapy030106 microbiologyPopulationenvironmental opportunistVirulenceHealth InformaticsBiologylcsh:Computer applications to medicine. Medical informaticsinfektiotCommunicable DiseasesFlavobacteriumbakteriofagit03 medical and health sciencesmedicineAnimalsHumansPhage TherapyHost-parasite interactionBacteriophageeducationMORTALITYResearchFLAVOBACTERIUM-COLUMNAREOutbreakEnvironmental Exposurekalatauditbiology.organism_classificationVirologyfagiterapia030104 developmental biologylcsh:Biology (General)Infectious disease (medical specialty)BACTERIOPHAGE THERAPYVIRULENCE1182 Biochemistry cell and molecular biologyTheoretical Biology and Medical Modelling
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Bioactive glass ions induce efficient osteogenic differentiation of human adipose stem cells encapsulated in gellan gum and collagen type I hydrogels

2019

Abstract Background Due to unmet need for bone augmentation, our aim was to promote osteogenic differentiation of human adipose stem cells (hASCs) encapsulated in gellan gum (GG) or collagen type I (COL) hydrogels with bioactive glass (experimental glass 2-06 of composition [wt-%]: Na2O 12.1, K2O 14.0, CaO 19.8, P2O5 2.5, B2O3 1.6, SiO2 50.0) extract based osteogenic medium (BaG OM) for bone construct development. GG hydrogels were crosslinked with spermidine (GG-SPD) or BaG extract (GG-BaG). Methods Mechanical properties of cell-free GG-SPD, GG-BaG, and COL hydrogels were tested in osteogenic medium (OM) or BaG OM at 0, 14, and 21 d. Hydrogel embedded hASCs were cultured in OM or BaG OM fo…

SerumAdipose stem cellCompressive StrengthAdipose tissueCell Count02 engineering and technologySpectrum Analysis Raman01 natural sciencesMineralization (biology)Hydrogel Polyethylene Glycol Dimethacrylatelaw.inventionchemistry.chemical_compoundOsteogenesislawOsteogenic differentiationBioactive glassMineralsTissue ScaffoldsbiologyStem CellsPolysaccharides Bacterialbioactive glassCell DifferentiationMiddle Aged021001 nanoscience & nanotechnologyGellan gumCross-Linking ReagentsAdipose TissueMechanics of MaterialsBioactive glassSelf-healing hydrogelsOsteocalcinFemaleStem cellimplantit0210 nano-technologyMaterials scienceCell SurvivalOsteocalcinosteogenic differentiationchemistry.chemical_elementBioengineeringmacromolecular substancesCalciumta3111010402 general chemistryCollagen Type ICollagen type I hydrogelBiokemia solu- ja molekyylibiologia - Biochemistry cell and molecular biologylasiBiomaterialsCalcification Physiologicbiologinen aktiivisuusgellan gum hydrogelAnimalsHumansta217Ionsgeelitta1182adipose stem cellkantasolutRats0104 chemical sciencesDurapatiteGene Expression RegulationchemistryBiophysicsbiology.proteinGlassGellan gum hydrogelluukudoksetcollagen type I hydrogelBiomarkersMaterials Science and Engineering: C
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Identifying yeasts using surface enhanced Raman spectroscopy

2019

Made available in DSpace on 2019-10-06T15:40:09Z (GMT). No. of bitstreams: 0 Previous issue date: 2019-07-05 Tekes Academy of Finland Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) The molecular fingerprints of yeasts Saccharomyces cerevisiae, Dekkera bruxellensis, and Wickerhamomyces anomalus (former name Pichia anomala) have been examined using surface-enhanced Raman spectroscopy (SERS) and helium ion microscopy (HIM). The SERS spectra obtained from cell cultures (lysate and non-treated cells) distinguish between these very closely related fungal species. Highly SERS active silver nano-particles suitable for detecting complex biomolecules were fabricated using a simple synt…

SilverPichia anomalaWickerhamomyces anomalusSurface PropertiesSaccharomyces cerevisiaeMetal Nanoparticles02 engineering and technologySaccharomyces cerevisiaeheliumyeast010402 general chemistrySpectrum Analysis Raman01 natural sciencesSilver nanoparticlePichiaAnalytical ChemistryBiokemia solu- ja molekyylibiologia - Biochemistry cell and molecular biologysymbols.namesakehiivaYeastsaggregaatitMycological Typing TechniquesInstrumentationSpectroscopychemistry.chemical_classificationChromatographyta114biologyDekkeraChemistrySERSBiomoleculehopeasilver nanoparticleSurface-enhanced Raman spectroscopy021001 nanoscience & nanotechnologybiology.organism_classificationAtomic and Molecular Physics and OpticsYeastYeast0104 chemical sciences3. Good healthaggregatesymbolshelium ion microscopynanohiukkaset0210 nano-technologyRaman spectroscopy
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NMR structure of a non-conjugatable, ADP-ribosylation associated, ubiquitin-like domain from Tetrahymena thermophila polyubiquitin locus.

2019

Abstract Background Ubiquitin-like domains (UbLs), in addition to being post-translationally conjugated to the target through the E1-E2-E3 enzymatic cascade, can be translated as a part of the protein they ought to regulate. As integral UbLs coexist with the rest of the protein, their structural properties can differ from canonical ubiquitin, depending on the protein context and how they interact with it. In this work, we investigate T.th-ubl5, a UbL present in a polyubiquitin locus of Tetrahymena thermophila, which is integral to an ADP-ribosyl transferase protein. Only one other co-occurrence of these two domains within the same protein has been reported. Methods NMR, multiple sequence al…

UBL DOMAINspektroskopiaGTPasePARKINBiochemistryPROTEIN BACKBONEACTIVATIONprotein-protein interaction0302 clinical medicineProtein-protein interactionUbiquitinmolekyylidynamiikkaNMR-spektroskopiaPolyubiquitinADP Ribose Transferases0303 health sciencesMultiple sequence alignmentbiologyFERM domainChemistryTetrahymenastructure-function relationshipFAMILYCell biologyRECEPTORSPost-translational modificationSignal TransductionBiophysicsSequence alignmentMolecular Dynamics SimulationUbiquitin-like domainsMECHANISMSProtein–protein interactionTetrahymena thermophila03 medical and health sciencesNMR spectroscopyADP-RibosylationubikitiinitMolecular BiologyNuclear Magnetic Resonance Biomolecular030304 developmental biologyMolecular dynamics simulationsStructure-function relationshipmolecular dynamics simulationsbiology.organism_classificationProtein Structure Tertiarypost-translational modificationProteasomeMOLECULAR-DYNAMICSbiology.protein1182 Biochemistry cell and molecular biologyproteiinitGTPASEProtein Processing Post-Translational030217 neurology & neurosurgeryFERM DOMAINBiochimica et biophysica acta. General subjects
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Synergistic enhancement via plasmonic nanoplate-bacteria-nanorod supercrystals for highly efficient SERS sensing of food-borne bacteria

2017

Bio-sensing techniques utilizing metallic nanoparticles as a probe have gained more and more attention and play today an important role in the detection of bacteria. To date, although several sensing materials have been tested, there is still a long way to go to achieve a fast, low-cost, ultrasensitive and multifunctional substrate suitable for a universal biosensor for detection of bacterial cells. Here, we report a novel probe design based on anisotropic plasmonic nanoparticles organized to a biocompatible 3D bio-inorganic scaffold, i.e., nanoplate-bacteria-nanorod supercrystals (NBNS) with extremely high surface-enhanced Raman spectroscopic (SERS) activity as a model of synergistic plasm…

assemblyMaterials scienceta221NanoparticleNanotechnology02 engineering and technologyrecognition of microbes010402 general chemistry01 natural sciencesBiokemia solu- ja molekyylibiologia - Biochemistry cell and molecular biologybakteeritsymbols.namesakeNanoteknologia - NanotechnologyMaterials ChemistryKemia - Chemical sciencesElectrical and Electronic EngineeringbacteriaInstrumentationPlasmonPlasmonic nanoparticlesmikrobien tunnistaminenta114SERSMetals and AlloysSubstrate (chemistry)021001 nanoscience & nanotechnologyCondensed Matter Physicschemometrics0104 chemical sciencesSurfaces Coatings and FilmsElectronic Optical and Magnetic Materialsasymmetric nanoparticlessymbolsnanoparticlesNanorodnanopartikkelit0210 nano-technologyRaman spectroscopyBiosensorRaman scattering
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