Search results for " computation"

showing 10 items of 1478 documents

Special Splines of Exponential Type for the Solutions of Mass Transfer Problems in Multilayer Domains

2016

We consider averaging methods for solving the 3-D boundary-value problem of second order in multilayer domain. The special hyperbolic and exponential type splines, with middle integral values of piece-wise smooth function interpolation are considered. With the help of these splines the problems of mathematical physics in 3-D with piece-wise coefficients are reduced with respect to one coordinate to 2-D problems. This procedure also allows to reduce the 2-D problems to 1-D problems and the solution of the approximated problemsa can be obtained analytically. In the case of constant piece-wise coefficients we obtain the exact discrete approximation of a steady-state 1-D boundary-value problem.…

Box splineDiscretization3D problemMathematical analysisaveraging method010103 numerical & computational mathematicsSpace (mathematics)01 natural sciencesExponential type010101 applied mathematicsanalytical solutionAlternating direction implicit methodspecial splinesModeling and SimulationADI methodQA1-939Order (group theory)0101 mathematicsConstant (mathematics)AnalysisMathematicsMathematicsInterpolationMathematical Modelling and Analysis
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Variable-order reference-free variant discovery with the Burrows-Wheeler Transform

2020

Abstract Background In [Prezza et al., AMB 2019], a new reference-free and alignment-free framework for the detection of SNPs was suggested and tested. The framework, based on the Burrows-Wheeler Transform (BWT), significantly improves sensitivity and precision of previous de Bruijn graphs based tools by overcoming several of their limitations, namely: (i) the need to establish a fixed value, usually small, for the order k, (ii) the loss of important information such as k-mer coverage and adjacency of k-mers within the same read, and (iii) bad performance in repeated regions longer than k bases. The preliminary tool, however, was able to identify only SNPs and it was too slow and memory con…

Burrows–Wheeler transformComputer science[SDV]Life Sciences [q-bio]Value (computer science)SNPAssembly-free0102 computer and information scienceslcsh:Computer applications to medicine. Medical informatics01 natural sciencesBiochemistryPolymorphism Single Nucleotide03 medical and health sciencesBWTChromosome (genetic algorithm)Structural BiologyHumansSensitivity (control systems)Molecular Biologylcsh:QH301-705.5Alignment-free; Assembly-free; BWT; INDEL; SNP030304 developmental biologyAlignment-free; Assembly-free; BWT; INDEL; SNP;De Bruijn sequence0303 health sciencesSettore INF/01 - InformaticaAlignment-freeApplied MathematicsResearchGenomicsSequence Analysis DNAINDELData structureGraphComputer Science ApplicationsVariable (computer science)lcsh:Biology (General)010201 computation theory & mathematicsAdjacency listlcsh:R858-859.7Suffix[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]AlgorithmAlgorithmsBMC Bioinformatics
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Explicit Bézier control net of a PDE surface

2017

The PDE under study here is a general fourth-order linear elliptic Partial Differential Equation. Having prescribed the boundary control points, we provide the explicit expression of the whole control net of the associated PDE Bézier surface. In other words, we obtain the explicit expressions of the interior control points as linear combinations of free boundary control points. The set of scalar coefficients of these combinations works like a mould for PDE surfaces. Thus, once this mould has been computed for a given degree, real-time manipulation of the resulting surfaces becomes possible by modifying the prescribed information. The work was partially supported by Spanish Ministry of Econo…

Bézier surfaceSurface GenerationPartial differential equationPDE surfaceScalar (mathematics)Mathematical analysis020207 software engineeringBézier curve010103 numerical & computational mathematics02 engineering and technologyBiharmonic Bézier surfaceBiharmonic surface01 natural sciencesComputational MathematicsPDE surfacePartial Differential EquationComputational Theory and MathematicsElliptic partial differential equationExplicit solutionModeling and Simulation0202 electrical engineering electronic engineering information engineering0101 mathematicsLinear combinationTensor product Bézier surfaceMathematicsComputers & Mathematics with Applications
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Whole-Genome Re-Sequencing Data to Infer Historical Demography and Speciation Processes in Land Snails: the Study of Two Candidula Sister Species

2021

Despite the global biodiversity of terrestrial gastropods and their ecological and economic importance, the genomic basis of ecological adaptation and speciation in land snail taxa is still largely unknown. Here, we combined whole-genome re-sequencing with population genomics to evaluate the historical demography and the speciation process of two closely related species of land snails from western Europe, Candidula unifasciata and C. rugosiuscula. Historical demographic analysis indicated fluctuations in the size of ancestral populations, probably driven by Pleistocene climatic fluctuations. Although the current population distributions of both species do not overlap, our approximate Bayesi…

Candidula unifasciatabiologywhole-genome re-sequencingDemographic historyGastropodaCandidulaReproductive isolationbiology.organism_classificationdemographic historyGeneral Biochemistry Genetics and Molecular BiologyEcological speciationGene flowPopulation genomicsapproximate Bayesian computationEvolutionary biologyGenetic algorithmecological speciationGeneral Agricultural and Biological Sciencesgene flow
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Indefinite integrals involving complete elliptic integrals of the third kind

2017

ABSTRACTA method developed recently for obtaining indefinite integrals of functions obeying inhomogeneous second-order linear differential equations has been applied to obtain integrals with respect to the modulus of the complete elliptic integral of the third kind. A formula is derived which gives an integral involving the complete integral of the third kind for every known integral for the complete elliptic integral of the second kind. The formula requires only differentiation and can therefore be applied for any such integral, and it is applied here to almost all such integrals given in the literature. Some additional integrals are derived using the recurrence relations for the complete …

Carlson symmetric formAbelian integralPure mathematicsApplied MathematicsMultiple integral010102 general mathematicsMathematical analysisSurface integralLine integralTrigonometric integral010103 numerical & computational mathematicsDarboux integral01 natural sciencesVolume integral0101 mathematicsAnalysisMathematicsIntegral Transforms and Special Functions
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Indefinite integrals of incomplete elliptic integrals from Jacobi elliptic functions

2017

Integration formulas are derived for the three canonical Legendre elliptic integrals. These formulas are obtained from the differential equations satified by these elliptic integrals when the indep...

Carlson symmetric formPure mathematicsQuarter periodApplied Mathematics010102 general mathematicsMathematical analysisElliptic function010103 numerical & computational mathematics01 natural sciencesJacobi elliptic functionsLegendre formArithmetic–geometric meanElliptic rational functionsElliptic integral0101 mathematicsAnalysisMathematicsIntegral Transforms and Special Functions
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Indefinite integrals involving the Jacobi Zeta and Heuman Lambda functions

2017

ABSTRACTJacobian elliptic functions are used to obtain formulas for deriving indefinite integrals for the Jacobi Zeta function and Heuman's Lambda function. Only sample results are presented, mostly obtained from powers of the twelve Glaisher elliptic functions. However, this sample includes all such integrals in the literature, together with many new integrals. The method used is based on the differential equations obeyed by these functions when the independent variable is the argument u of elliptic function theory. The same method was used recently, in a companion paper, to derive similar integrals for the three canonical incomplete elliptic integrals.

Carlson symmetric formPure mathematicsQuarter periodApplied Mathematics010102 general mathematicsMathematical analysisElliptic functionTrigonometric integral010103 numerical & computational mathematics01 natural sciencesJacobi elliptic functionsLegendre formElliptic rational functionsElliptic integral0101 mathematicsAnalysisMathematicsIntegral Transforms and Special Functions
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Systèmes hyperboliques d'équations aux dérivées partielles linéaires : régularité et matrices diagonalisables

2001

Resume La regularite des solutions d'un systeme d'equations aux derivees partielles hyperbolique, est liee aux proprietes spectrales d'un faisceaux de matrices reelles. Nous nous interessons ici a la regularite L 2 . Celle ci est obtenue si et seulement si l'exponentielle imaginaire du faisceau est bornee. Nous regardons le lien entre cette condition et les proprietes spectrales du faisceau, ici diagonalisable sur R . Nous donnons en particulier un critere d'exponentielle bornee si les valeurs propres ne sont pas de multiplicites constantes, et nous montrons que dans le cas des faisceaux engendres par deux matrices 3×3, l'exponentielle est bornee si et seulement si le faisceau est analytiqu…

Cauchy problemPure mathematics[MATH.MATH-HO]Mathematics [math]/History and Overview [math.HO]010102 general mathematics010103 numerical & computational mathematicsGeneral Medicine0101 mathematics01 natural sciencesHyperbolic partial differential equationComputingMilieux_MISCELLANEOUSMathematics
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Application of Genetic Algorithm on Parameter Optimization of Three Vehicle Crash Scenarios

2017

Abstract This paper focuses on the development of mathematical models for vehicle frontal crashes. The models under consideration are threefold: a vehicle into barrier, vehicle-occupant and vehicle to vehicle frontal crashes. The first model is represented as a simple spring-mass-damper and the second case consists of a double-spring-mass-damper system, whereby the front mass and the rear mass represent the vehicle chassis and the occupant, respectively. The third model consists of a collision of two vehicles represented by two masses moving in opposite directions. The springs and dampers in the models are nonlinear piecewise functions of displacements and velocities respectively. More spec…

ChassisComputer scienceModeling010103 numerical & computational mathematics02 engineering and technologyCollision01 natural sciencesCrash testfrontal crashvehicle-occupantDamperNonlinear system020303 mechanical engineering & transports0203 mechanical engineeringControl theoryControl and Systems EngineeringGenetic algorithmparameters estimationgenetic algorithm0101 mathematicsSimulationfrontal crash; genetic algorithm; Modeling; parameters estimation; vehicle-occupant; Control and Systems EngineeringMotor vehicle crash
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Approximate Osher–Solomon schemes for hyperbolic systems

2016

This paper is concerned with a new kind of Riemann solvers for hyperbolic systems, which can be applied both in the conservative and nonconservative cases. In particular, the proposed schemes constitute a simple version of the classical Osher-Solomon Riemann solver, and extend in some sense the schemes proposed in Dumbser and Toro (2011) 19,20. The viscosity matrix of the numerical flux is constructed as a linear combination of functional evaluations of the Jacobian of the flux at several quadrature points. Some families of functions have been proposed to this end: Chebyshev polynomials and rational-type functions. Our schemes have been tested with different initial value Riemann problems f…

Chebyshev polynomialsApplied MathematicsNumerical analysisMathematical analysis010103 numerical & computational mathematics01 natural sciencesRiemann solverEuler equations010101 applied mathematicsComputational Mathematicssymbols.namesakeRiemann hypothesisRiemann problemJacobian matrix and determinantsymbols0101 mathematicsShallow water equationsMathematicsApplied Mathematics and Computation
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