Search results for " protein"

showing 10 items of 12147 documents

Evidence for specific, high-affinity binding sites for a proteinaceous elicitor in tobacco plasma membrane

1995

Abstract Binding of cryptogein, a proteinaceous elicitor, was studied on tobacco plasma membrane. The binding of the [125I]cryptogein was saturable, reversible and specific with an apparent Kd of 2 nM. A single class of cryptogein binding sites was found with a sharp optimum pH for binding at about pH 7.0. The high-affinity correlates with cryptogein concentrations required for biological activity in vivo.

0106 biological sciencesNicotiana tabacumBiophysics[SDV.BC]Life Sciences [q-bio]/Cellular Biology01 natural sciencesBiochemistryFungal Proteins03 medical and health sciencesStructural BiologyIn vivoTobaccoGeneticsBinding siteReceptor[SDV.BC] Life Sciences [q-bio]/Cellular BiologyMolecular BiologyComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesBinding SitesbiologyNicotiana tabacumChemistryAlgal ProteinsCell MembraneElicitinBiological activityCell BiologyElicitorbiology.organism_classification3. Good healthElicitorKineticsPlants ToxicMembraneBiochemistryCryptogeinPlasma membraneReceptor010606 plant biology & botany
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DNA polymorphism at the FRIGIDA gene in Arabidopsis thaliana : extensive nonsynonymous variation is consistent with local selection for flowering time

2002

FRIGIDA (FRI) is a major gene involved in the regulation of flowering time in Arabidopsis thaliana. Nucleotide variation at this gene was investigated by sequencing 25 field ecotypes collected from western Europe. Genetic diversity at FRI was characterized by a high number of haplotypes and an excess of low-frequency polymorphisms. A large excess of intraspecific nonsynonymous variation associated with low synonymous variation was detected along the first exon in the FRI gene. In contrast, no excess of nonsynonymous divergence was detected between A. thaliana and A. lyrata. The Tajima and McDonald and Kreitman tests, however, suggested that this gene has evolved in a nonneutral fashion. Non…

0106 biological sciencesNonsynonymous substitutionArabidopsisFlowers01 natural sciences03 medical and health sciencesExonGenetics[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyArabidopsis thaliana[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyMolecular BiologyGeneEcology Evolution Behavior and SystematicsPhylogenyComputingMilieux_MISCELLANEOUS030304 developmental biologyGeneticsRecombination Genetic0303 health sciencesGenetic diversityPolymorphism GeneticbiologyEcotypeArabidopsis ProteinsHaplotypeGenetic VariationSequence Analysis DNAbiology.organism_classificationMajor genePhenotype010606 plant biology & botany
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Gene expression levels influence amino acid usage and evolutionary rates in endosymbiotic bacteria

2005

International audience; Most endosymbiotic bacteria have extremely reduced genomes, accelerated evolutionary rates, and strong AT base compositional bias thought to reflect reduced efficacy of selection and increased mutational pressure. Here, we present a comparative study of evolutionary forces shaping five fully sequenced bacterial endosymbionts of insects. The results of this study were three-fold: (i) Stronger conservation of high expression genes at not just nonsynonymous, but also synonymous, sites. (ii) Variation in amino acid usage strongly correlates with GC content and expression level of genes. This pattern is largely explained by greater conservation of high expression genes, l…

0106 biological sciencesNonsynonymous substitutionInsectafood.ingredientBlochmanniaBiology010603 evolutionary biology01 natural sciencesGenomeEvolution Molecular03 medical and health sciencesfoodBacterial ProteinsBuchneraSpecies SpecificityGeneticsAnimalsAmino AcidsCodonSymbiosisWigglesworthiaGene030304 developmental biology2. Zero hungerGeneticschemistry.chemical_classification0303 health sciences[SDV.GEN]Life Sciences [q-bio]/GeneticsBacteriaGene Expression Regulation BacterialGeneral Medicinebiology.organism_classificationAT Rich SequenceGC Rich SequenceAmino acidINSECTEAmino Acid SubstitutionchemistryCodon usage biasMutationDatabases Nucleic AcidBuchneraGC-content
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Regulation of Nicotiana tabacum osmotic stress-activated protein kinase and its cellular partner GAPDH by nitric oxide in response to salinity

2010

Several studies focusing on elucidating the mechanism of NO (nitric oxide) signalling in plant cells have highlighted that its biological effects are partly mediated by protein kinases. The identity of these kinases and details of how NO modulates their activities, however, remain poorly investigated. In the present study, we have attempted to clarify the mechanisms underlying NO action in the regulation of NtOSAK (Nicotiana tabacum osmotic stress-activated protein kinase), a member of the SNF1 (sucrose non-fermenting 1)-related protein kinase 2 family. We found that in tobacco BY-2 (bright-yellow 2) cells exposed to salt stress, NtOSAK is rapidly activated, partly through a NO-dependent pr…

0106 biological sciencesOsmosisSalinityNicotiana tabacumMolecular Sequence DataNitric Oxide01 natural sciencesBiochemistry03 medical and health sciencesEnzyme activatorStress PhysiologicalTobaccoASK1[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyAmino Acid SequenceProtein kinase AMolecular BiologyGlyceraldehyde 3-phosphate dehydrogenaseCells Cultured030304 developmental biologyPlant Proteins0303 health sciencesbiologyKinaseGlyceraldehyde-3-Phosphate DehydrogenasesLife SciencesCell BiologyS-Nitrosylationbiology.organism_classification3. Good healthBiochemistrybiology.proteinPhosphorylationProtein Kinases010606 plant biology & botany
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Kinetic studies on protoporphyrinogen oxidase inhibition by diphenyl ether herbicides

1991

Diphenyl ethers (DPEs) and related herbicides are powerful inhibitors of protoporphyrinogen oxidase, an enzyme involved in the biosynthesis of haems and chlorophylls. The inhibition kinetics of protoporphyrinogen oxidase of various origins by four DPEs, (methyl)-5-[2-chloro-4-(trifluoromethyl)phenoxy]-2-nitrobenzoic acid (acifluorfen and its methyl ester, acifluorfen-methyl), methyl-5-[2-chloro-4-(trifluoromethyl) phenoxy]-2-chlorobenzoate (LS 820340) and methyl-5-[2-chloro-5-(trifluoromethyl)phenoxy]-2-nitrobenzoic acid (RH 5348), were studied. The inhibitions of the enzymes from maize (Zea mays) mitochondrial and etiochloroplastic membranes and mouse liver mitochondrial membranes were com…

0106 biological sciencesOxidoreductases Acting on CH-CH Group DonorsStereochemistry[SDV]Life Sciences [q-bio]Carboxylic acidMitochondria LiverEtherSaccharomyces cerevisiaeAcifluorfen01 natural sciencesBiochemistryMitochondrial ProteinsMiceStructure-Activity Relationship03 medical and health scienceschemistry.chemical_compoundMALHERBOLOGIEPhenolsAnimalsProtoporphyrinogen OxidaseMolecular BiologyComputingMilieux_MISCELLANEOUS030304 developmental biologychemistry.chemical_classification0303 health sciencesTrifluoromethylFlavoproteinsHerbicidesDiphenyl etherIntracellular MembranesCell BiologyPlantsMitochondriaProtoporphyrinogen IX[SDV] Life Sciences [q-bio]KineticsEnzymechemistryProtoporphyrinogen oxidaseOxidoreductasesEthersResearch Article010606 plant biology & botanyBiochemical Journal
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Bacterial rhamnolipids are novel MAMPs conferring resistance to Botrytis cinerea in grapevine

2009

International audience; Rhamnolipids produced by the bacteria Pseudomonas aeruginosa are known as very efficient biosurfactant molecules. They are used for a wide range of industrial applications, especially in food, cosmetics and pharmaceutical formulations as well as in bioremediation of pollutants. In this paper, the role of rhamnolipids as novel molecules triggering defence responses and protection against the fungus Botrytis cinerea in grapevine is presented. The effect of rhamnolipids was assessed in grapevine using cell suspension cultures and vitro-plantlets. Ca2+ influx, mitogen-activated protein kinase activation and reactive oxygen species production form part of early signalling…

0106 biological sciencesPOTENTIATIONPhysiologyPlant ScienceFungusmedicine.disease_cause01 natural sciencesPSEUDOMONAS AERUGINOSAMicrobiologySurface-Active Agents03 medical and health sciencesBioremediationBOTRYTIS CINEREA[CHIM.ANAL]Chemical Sciences/Analytical chemistrySpore germinationmedicineGRAPEVINEVitis[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biochemistry [q-bio.BM]Cells CulturedComputingMilieux_MISCELLANEOUS030304 developmental biologyBotrytis cinerea[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesbiologyPseudomonas aeruginosa[CHIM.ORGA]Chemical Sciences/Organic chemistryfungiPLANT DEFENCE[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biologyRHAMNOLIPIDESpores Fungalbiology.organism_classification[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biomolecules [q-bio.BM][SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyRNA PlantCalciumBotrytisMAMPsGlycolipidsMitogen-Activated Protein KinasesReactive Oxygen SpeciesBacteria010606 plant biology & botany
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Inhibitory Effect of Azamacrocyclic Ligands on Polyphenol Oxidase in Model and Food Systems

2020

[EN] Enzymatic browning is one of the main problems faced by the food industry due to the enzyme polyphenol oxidase (PPO) provoking an undesirable color change in the presence of oxygen. Here, we report the evaluation of 10 different azamacrocyclic compounds with diverse morphologies as potential inhibitors against the activity of PPO, both in model and real systems. An initial screening of 10 ligands shows that all azamacrocyclic compounds inhibit to some extent the enzymatic browning, but the molecular structure plays a crucial role on the power of inhibition. Kinetic studies of the most active ligand (L2) reveal a S-parabolic I-parabolic noncompetitive inhibition mechanism and a remarkab…

0106 biological sciencesPPOTECNOLOGIA DE ALIMENTOSMacrocyclic polyaminesLigands01 natural sciencesPolyphenol oxidaseQUIMICA ORGANICANon-competitive inhibitionBrowningEnzyme InhibitorsInhibitory effectIC50InhibitionPlant Proteinschemistry.chemical_classificationEnzymatic activityChemistryReal systemsLigand010401 analytical chemistryGeneral Chemistry0104 chemical sciencesFruit and Vegetable JuicesKineticsEnzymeBiochemistryFruitMalusGeneral Agricultural and Biological SciencesCatechol Oxidase010606 plant biology & botanyJournal of Agricultural and Food Chemistry
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2019

Trade-offs have been shown to play an important role in the divergence of mating strategies and sexual ornamentation, but their importance in explaining warning signal diversity has received less attention. In aposematic organisms, allocation costs of producing the conspicuous warning signal pigmentation under nutritional stress could potentially trade-off with life-history traits and maintain variation in warning coloration. We studied this with an aposematic herbivore Arctia plantaginis (Arctiidae), whose larvae and adults show extensive variation in aposematic coloration. In larvae, less melanic coloration (i.e. larger orange patterns) produces a more efficient warning signal against pre…

0106 biological sciencesPhenotypic plasticityLarvaHerbivoreLow protein010604 marine biology & hydrobiologyMelanismZoologyAposematismBiology010603 evolutionary biology01 natural sciencesLife history theoryAnimal Science and ZoologyGene–environment interactionEcology Evolution Behavior and SystematicsJournal of Animal Ecology
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Collisional mechanism of ligand release by Bombyx mori JHBP, a member of the TULIP / Takeout family of lipid transporters.

2020

International audience; Juvenile hormones (JHs) regulate important processes in insects, such as postembryonic development and reproduction. In the hemolymph of Lepidoptera, these lipophilic sesquiterpenic hormones are transported from their site of synthesis to target tissues by high affinity carriers, the juvenile hormone binding proteins (JHBPs). Lepidopteran JHBPs belong to a recently uncovered, yet very ancient family of proteins sharing a common lipid fold (TULIP domain) and involved in shuttling various lipid ligands. One important, but poorly understood aspect of JHs action, is the mechanism of hormone transfer to or through the plasma membranes of target cells. Since many membrane-…

0106 biological sciencesPhospholipidMothsLigands01 natural sciencesBiochemistryManduca sexta03 medical and health scienceschemistry.chemical_compoundProtein structureBombyx moriAnimalsMolecular Biology030304 developmental biology0303 health sciencesJHBPbiologyLigandTakeout-like proteinsfungiBombyx moriJuvenile HormoneIsothermal titration calorimetryBiological Transportbiology.organism_classificationBombyxLipid MetabolismTULIP domain010602 entomologyMembraneBiochemistrychemistryManduca sextaInsect ScienceJuvenile hormone[SDE]Environmental SciencesInsect ProteinsCarrier Proteins
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Functional rearrangement of the light-harvesting antenna upon state transitions in a green alga

2014

AbstractState transitions in the green alga Chlamydomonas reinhardtii serve to balance excitation energy transfer to photosystem I (PSI) and to photosystem II (PSII) and possibly play a role as a photoprotective mechanism. Thus, light-harvesting complex II (LHCII) can switch between the photosystems consequently transferring more excitation energy to PSII (state 1) or to PSI (state 2) or can end up in LHCII-only domains. In this study, low-temperature (77 K) steady-state and time-resolved fluorescence measured on intact cells of Chlamydomonas reinhardtii shows that independently of the state excitation energy transfer from LHCII to PSI or to PSII occurs on two main timescales of <15 ps and …

0106 biological sciencesPhotosystem IIEnergy transferBiophysicsLight-Harvesting Protein ComplexesphotosystemChlamydomonas reinhardtiiPhotosystem IPhotochemistry01 natural sciences03 medical and health sciencesstate transitionsgreen algaSDG 7 - Affordable and Clean Energy030304 developmental biologyPhotosystem0303 health sciencesenergy transfer/dk/atira/pure/sustainabledevelopmentgoals/affordable_and_clean_energybiologyPhotosystem I Protein ComplexChemistryta1182Photosystem II Protein ComplexState (functional analysis)biology.organism_classificationFluorescenceCell BiophysicsAtomic physicsExcitationChlamydomonas reinhardtii010606 plant biology & botanyBiophysical journal
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