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Structure and dynamics in liquid bismuth and Bin clusters: A density functional study
2014
Density functional/molecular dynamics simulations with more than 500 atoms have been performed on liquid bismuth at 573, 773, 923, and 1023 K and on neutral Bi clusters with up to 14 atoms. There are similar structural patterns (coordination numbers, bond angles, and ring patterns) in the liquid and the clusters, with significant differences from the rhombohedral crystalline form. We study the details of the structure (structure factor, pair, and cavity distribution functions) and dynamical properties (vibration frequencies, diffusion constants, power spectra), and compare with experimental results where available. While the three short covalent bonds typical to pnictogens are characteristi…
Mukautuvat viipalointialgoritmit lisäävässä valmistuksessa
2017
Lisäävä valmistus on kasvattanut nopeasti suosiotaan viime vuosina. Viipalointi on oleellinen osa lisäävää valmistusta, mikä vaikuttaa esimerkiksi valmistettavan esineen pinnan laatuun, valmistusnopeuteen sekä mekaanisiin ominaisuuksiin. Tämän tutkielman tarkoituksena on selvittää, minkälaisia ominaisuuksia viipalointialgoritmilta vaaditaan ja minkälaisia menetelmiä niiden toteuttamiseen on olemassa. Mukautuvaa viipalointialgoritmia käyttämällä voidaan nopeuttaa esineen valmistusaikaa ilman, että pinnan laatu heikentyy. Additive manufacturing has rapidly gained popularity in recent years. Slicing is an important part of additive manufacturin processes. It affects the manufactured part’s sur…
Study of the interactions between Broad bean wilt virus 1 and its host plants
Broad bean wilt virus 1 (BBWV-1) is the type member of the Fabavirus genus, in the Secoviridae family. BBWV-1 is worldwide distributed and infects important horticultural and ornamental crops causing considerable economic losses. However, information about the biological and molecular characteristics of BBWV-1 isolates is scarce. BBWV-1 is composed of two molecules of positive single-stranded RNA (ssRNA+) that are separately encapsidated in virions of icosahedral morphology. Each ssRNA+ encodes polyproteins which are processed by proteolytic cleavage into functional peptides. RNA1 (~ 5.8 kb) encodes for one polyprotein that renders proteins involved in viral replication: a protease cofactor…
Virtual resource-sharing mechanisms in software-defined and virtualized wireless network
2018
CVB3 VP1 interacts with MAT1 to inhibit cell proliferation by interfering with Cdk-activating kinase complex activity in CVB3-induced acute pancreati…
2021
Coxsackievirus B3 (CVB3) belongs to the genus Enterovirus of the family Picornaviridae and can cause acute acinar pancreatitis in adults. However, the molecular mechanisms of pathogenesis underlying CVB3-induced acute pancreatitis have remained unclear. In this study, we discovered that CVB3 capsid protein VP1 inhibited pancreatic cell proliferation and exerted strong cytopathic effects on HPAC cells. Through yeast two-hybrid, co-immunoprecipitation, and confocal microscopy, we show that Menage a trois 1 (MAT1), a subunit of the Cdk-Activating Kinase (CAK) complex involved in cell proliferation and transcription, is a novel interaction protein with CVB3 VP1. Moreover, CVB3 VP1 inhibited MAT…
Internalization of novel non-viral vector TAT-streptavidin into human cells
2007
BMC Biotechnology, 7 (1)
The Extracellular δ-Domain is Essential for the Formation of CD81 Tetraspanin Webs
2014
AbstractCD81 is a ubiquitously expressed member of the tetraspanin family. It forms large molecular platforms, so-called tetraspanin webs that play physiological roles in a variety of cellular functions and are involved in viral and parasite infections. We have investigated which part of the CD81 molecule is required for the formation of domains in the cell membranes of T-cells and hepatocytes. Surprisingly, we find that large CD81 platforms assemble via the short extracellular δ-domain, independent from a strong primary partner binding and from weak interactions mediated by palmitoylation. The δ-domain is also essential for the platforms to function during viral entry. We propose that, ins…
Visual Contrast Modulates Operant Learning Responses in Larval Zebrafish.
2018
The larval zebrafish is a promising vertebrate model organism to study neural mechanisms underlying learning and memory due to its small brain and rich behavioral repertoire. Here, we report on a high-throughput operant conditioning system for zebrafish larvae, which can simultaneously train 12 fish to associate a visual conditioned pattern with electroshocks. We find that the learning responses can be enhanced by the visual contrast, not the spatial features of the conditioned patterns, highlighted by several behavioral metrics. By further characterizing the learning curves as well as memory extinction, we demonstrate that the percentage of learners and the memory length increase as the co…
Development and characterisation of polymer composite materials with bio-inspired functions
2018
Promocijas darbs ir izstrādāts disertācijas veidā fizikas nozarē materiālu fizikas apakšnozarē. Pētījums tika veikts LU Materiālu mehānikas institūtā. Darbs saistīts ar aktuālu un jaunu pētījumu virzienu: bioinspirēto funkciju tālāku attīstīšanu slodzi nesošos kompozītos. Tās ir mehānisku triecienu vizuālās indikācijas un polimēru matricas vaskulārās pašdziedināšanas funkcijas. Šīs funkcijas tika nodrošinātas, izveidojot viedus slāņus un iebūvējot tos kompozītā. Pētījumā tika noskaidrotas piemērotās pārbaužu secības, attīstītas kvantitatīvas metodes un mehānisks modelis, lai novērtētu jauno funkciju efektivitāti kompozītos. Ir pierādīta funkciju augstā efektivitāte un spēja uzlabot slodzi n…
Sustained attention required for effective dimension-based retro-cue benefit in visual working memory
2023
In visual working memory (VWM) tasks, participants’ performances can be improved through the use of dimension-based retro-cues, which direct internal attention to prioritize a particular dimension (e.g., color or orientation) of VWM representations even after the stimuli disappear. This phenomenon is known as the dimension-based retro-cue benefit (RCB). The present study investigates whether sustained attention is required for the dimension-based RCB by inserting interference or interruption between the retro-cue and the test array to distract attention. We tested the effects of perceptual interference or cognitive interruption on dimension-based RCB when the interference (Experiments 1 and…