Search results for "ADE"

showing 10 items of 15269 documents

Genomic Analysis of European Drosophila melanogaster Populations Reveals Longitudinal Structure, Continent-Wide Selection, and Previously Unknown DNA…

2020

Genetic variation is the fuel of evolution, with standing genetic variation especially important for short-term evolution and local adaptation. To date, studies of spatiotemporal patterns of genetic variation in natural populations have been challenging, as comprehensive sampling is logistically difficult, and sequencing of entire populations costly. Here, we address these issues using a collaborative approach, sequencing 48 pooled population samples from 32 locations, and perform the first continent-wide genomic analysis of genetic variation in European Drosophila melanogaster. Our analyses uncover longitudinal population structure, provide evidence for continent-wide selective sweeps, ide…

0106 biological sciencesMaleincipient sexual isolationQH301 BiologyAcclimatizationADNGenome Insect01 natural sciencesPopulation genomicsAdaptation; Clines; Demography; Population genomics; Selection; SNPs; Structural variants; Acclimatization; Altitude; Animals; DNA Viruses; Drosophila melanogaster; Europe; Genome Mitochondrial; Haplotypes; Insect Viruses; Male; Phylogeography; Polymorphism Single Nucleotide; Genome Insect; Genomic Structural Variation; Microbiota; Selection GeneticSDG 13 - Climate ActionComputingMilieux_MISCELLANEOUSeducation.field_of_study0303 health sciencesAltitude[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]PE&RCgeneettinen muunteluPhylogeographyDrosophila melanogasterLaboratory of GeneticsTransposable elementnorth-americanmahlakärpäsetSettore BIO/18 - GENETICAselectionLaboratorium voor Erfelijkheidsleeramino-acid polymorphism03 medical and health sciencesGeneticGeneticsAdaptation demographyMicrobiomeAdaptationPolymorphismeducationDrosophilaMolecular BiologySelectionEcology Evolution Behavior and SystematicsDemography[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]DNAchemistryEvolutionary biologyGenome MitochondrialGenomic Structural Variationinversion in(3r)payneAdaptationPopulation genomicsStructural variantsGenètica[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosisadaptation demographyCandidate genenucleotide polymorphismAcademicSubjects/SCI01180chemistry.chemical_compoundMelanogaster2. Zero hungerGenomebiologyMicrobiotaSingle NucleotideClinesclinesMitochondrialEuropepopulaatiogenetiikkatransposable elementsDrosophila melanogasterSNPsnatural-populationspopulation genomicsPopulationnext-generationDrosòfila melanogasterInsect Viruses010603 evolutionary biologyPolymorphism Single NucleotideQH301latitudinal clineGenetic variationAnimalsSelection GeneticSelection (genetic algorithm)DiscoveriesLocal adaptation030304 developmental biologylife-historyAcademicSubjects/SCI01130DNA Virusesstructural variantsDASbiology.organism_classificationHaplotypes13. Climate actionperimä[SDE.BE]Environmental Sciences/Biodiversity and EcologyInsectDNAMolecular Biology and Evolution
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Testosterone-Mediated Effects on Fitness-Related Phenotypic Traits and Fitness

2009

International audience; The physiological and behavioral mechanisms underlying life-history trade-offs are a continued source of debate. Testosterone (T) is one physiological factor proposed to mediate the trade-off between reproduction and survival. We use phenotypic engineering and multiple laboratory and field fitness-related phenotypic traits to test the effects of elevated T between two bank vole Myodes glareolus groups: dominant and subordinate males. Males with naturally high T levels showed higher social status (laboratory dominance) and mobility (distance between capture sites) than low-T males, and the effect of T on immune response was also T group specific, suggesting that behav…

0106 biological sciencesMalemedicine.medical_specialtymedicine.drug_class[SDE.MCG]Environmental Sciences/Global ChangesRadioimmunoassayZoologySpatial BehaviorHierarchy SocialTrade-off010603 evolutionary biology01 natural sciencesAntibodies03 medical and health sciencesImmune systemSpecies SpecificityInternal medicinemedicineAgonistic behaviourAnimalsTestosteroneEcology Evolution Behavior and SystematicsFinland030304 developmental biology0303 health sciencesbiologyReproductive successAggressionArvicolinaePhenotypic traitbiology.organism_classificationAndrogenSurvival AnalysisBank voleEndocrinologyPhenotypeImmunoglobulin GLinear Modelsmedicine.symptom
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Effectiveness of European Atlanto-Mediterranean MPAs: Do they accomplish the expected effects on populations, communities and ecosystems?

2008

The success of MPAs in conserving fishing resources and protecting marine biodiversity relies strongly on how well they meet their planned (or implicit) management goals. From a review of empirical studies aiming at assessing the ecological effects of Mediterranean and Macaronesian MPAs, we conclude that establishing an MPA is successful for (i) increasing the abundance/biomass, (ii) increasing the proportion of larger/older individuals, and (iii) enhancing the fecundity of commercially harvested populations; also, MPAs demonstrated to be effective for (iv) augmenting local fishery yields through biomass exportation from the protected area, and (v) inducing shifts in fish assemblage structu…

0106 biological sciencesMarine conservationCoastal zone managementSettore BIO/07 - EcologiaMacaronesia.Marine conservation[SDE.MCG]Environmental Sciences/Global ChangesMarine protected areaMediterranean010603 evolutionary biology01 natural sciencesCentro Oceanográfico de BalearesEnvironmental protectionMarine resources conservation -- Mediterranean SeaMacaronesiaMarine protected areasDominance (ecology)EcosystemCoastal ecologyMeta-analysi14. Life underwaterCoastal ecosystem healthMedio MarinoTrophic cascadeComputingMilieux_MISCELLANEOUSNature and Landscape ConservationEcological stabilityEcologyCoastal populations and communities010604 marine biology & hydrobiologyCoastal habitats Meta-analysisMarine reserveCoastal habitatMarine resources conservation -- MacaronesiaMarine reserve15. Life on landCoastal populations and communitieGeography13. Climate actionMarine protected areaProtected areaCoastal habitats
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Man-made garbage pollution on the Mediterranean coastline

1991

Abstract Measurements of persistent litter on 13 beaches in Spain, Italy (Sicily), Turkey, Cyprus and Israel between 1988 and 1989 show that plastic items are the most abundant in the litter composition, followed by wood, metal and glass items. Remnants of fishing gear are rather rare. It appears that the quantity of litter on a beach is inversely related to its geographical distance to a population center and directly related to the number of visitors frequenting it. Seasonal fluctuations in coastal litter are caused by storm waves which wash the litter landward, leaving the beach clean during winter, and by bathers who pollute it during summer. Based on the nature of the garbage, there ar…

0106 biological sciencesMediterranean climatePollutionmedia_common.quotation_subjectPopulationFishing010501 environmental sciencesAquatic ScienceSettore MED/42 - Igiene Generale E ApplicataOceanography01 natural sciences14. Life underwatereducationWater pollution0105 earth and related environmental sciencesmedia_commonShoreeducation.field_of_studygeography.geographical_feature_category010604 marine biology & hydrobiologyPollutionOceanographyGeography13. Climate actionLitterman-made garbageGarbageMarine Pollution Bulletin
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Zeolite-silver-zinc nanoparticles : biocompatibility and their effect on the compressive strength of mineral trioxide aggregate

2016

Background This study was carried out to evaluate the biocompatibility of zeolite-silver-zinc (Ze-Ag-Zn) nanoparticles and their effect on the compressive strength of Mineral Trioxide Aggregate (MTA). Material and Methods Biocompatibility was evaluated by an MTT assay on the pulmonary adenocarcinoma cells with 0.05, 0.1, 0.25, 0.5, 1 and 5 mg/mL concentrations of Ze-Ag-Zn. For compressive strength test, four groups containing 15 stainless-steel cylinders with an internal diameter of 4 and a height of 6 mm were prepared and MTA (groups 1 and 2) or MTA + 2% Ze-Ag-Zn (groups 3 and 4) were placed in the cylinders. The compressive strength was evaluated using a universal testing machine 4 days a…

0106 biological sciencesMineral trioxide aggregateUniversal testing machineBiocompatibilityChemistryResearchPulmonary adenocarcinomaMineralogy030206 dentistryZinc nanoparticles:CIENCIAS MÉDICAS [UNESCO]01 natural sciences03 medical and health sciences0302 clinical medicineCompressive strength010608 biotechnologyBiomaterials and Bioengineering in DentistryUNESCO::CIENCIAS MÉDICASMTT assayZeoliteGeneral DentistryNuclear chemistry
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Increasing temperature alters the within-host competition of viral strains and influences virus genetic variability

2021

Environmental conditions can affect viral accumulation, virulence and adaptation, which have implications in the disease outcomes and efficiency of control measures. Concurrently, mixed viral infections are relevant in plants, being their epidemiology shaped by within-host virus–virus interactions. However, the extent in which the combined effect of variations in abiotic components of the plant ecological niche and the prevalence of mixed infections affect the evolutionary dynamics of viral populations is not well understood. Here, we explore the interplay between ecological and evolutionary factors during viral infections and show that isolates of two strains of Pepino mosaic potexvirus co…

0106 biological sciencesMixed infectionsvirusesPlant virusVirulenceBiologyEvolutionary ecology01 natural sciencesMicrobiology03 medical and health sciencesplant virusenvironmental factorsVirologyPlant virusgenetic variabilityEnvironmental factorsAcademicSubjects/MED00860Genetic variabilityEvolutionary dynamics030304 developmental biologyGenetics0303 health sciencesGenetic diversityHost (biology)mixed infectionsAcademicSubjects/SCI01130AcademicSubjects/SCI02285evolutionary ecologyGenetic variabilityEvolutionary ecologyAdaptationResearch Article010606 plant biology & botany
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When less means more: evolutionary and developmental hypotheses in rodent molars.

2012

10 pages; International audience; Tooth number in rodents is an example of reduction in evolution. All rodents have a toothless diastema lacking canine and most premolars present in most other mammals. Whereas some rodent lineages retained one premolar (p4), many others lost it during evolution. Recently, an 'inhibitory cascade' developmental model (IC) has been used to predict how the first molar (m1) influences the number and relative sizes of the following distal molars (m2 and m3). The model does not, however, consider the presence of premolars, and here we examine whether the premolar could influence and constrain molar proportions during development and evolution. By investigating a l…

0106 biological sciencesMolarRodentmolar proportionsRodentiapremolarBiologyMacroevolutionModels Biological010603 evolutionary biology01 natural sciencesMandibular first molar03 medical and health sciencesstomatognathic systembiology.animalevolutionPremolarmedicineAnimalsdevelopmentEcology Evolution Behavior and Systematics[ SDU.STU.PG ] Sciences of the Universe [physics]/Earth Sciences/Paleontology030304 developmental biology0303 health sciencesmacroevolutionDentition[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]Anatomyinhibitory cascadeBiological EvolutionMolar[ SDV.BID.EVO ] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]medicine.anatomical_structureEvolutionary biologyrodentsDiastemaLinear ModelsBasal phenotype[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/Paleontology
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Evolution of mammal tooth patterns: new insights from a developmental prediction model.

2009

14 pages.; International audience; The study of mammalian evolution is often based on insights into the evolution of teeth. Developmental studies may attempt to address the mechanisms that guide evolutionary changes. One example is the new developmental model proposed by Kavanagh et al. (2007), which provides a high-level testable model to predict mammalian tooth evolution. It is constructed on an inhibitory cascade model based on a dynamic balance of activators and inhibitors, regulating differences in molar size along the lower dental row. Nevertheless, molar sizes in some mammals differ from this inhibitory cascade model, in particular in voles. The aim of this study is to point out arvi…

0106 biological sciencesMolarZoologyBiology010603 evolutionary biology01 natural sciencesModels Biological03 medical and health sciencesMicestomatognathic systemMammal toothCricetinaeevolutionGeneticsAnimalsOdontometryrodents.[ SDV.BDD ] Life Sciences [q-bio]/Development Biology[SDV.BDD]Life Sciences [q-bio]/Development BiologyEcology Evolution Behavior and Systematics[ SDU.STU.PG ] Sciences of the Universe [physics]/Earth Sciences/Paleontology030304 developmental biology0303 health sciencesArvicolinaeFossils[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]evo-devoEvolution of mammalsinhibitory cascadeBiological Evolution[ SDV.BID.EVO ] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]Rapid acquisitionEvolutionary biologyrodentsEvolutionary developmental biology[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/PaleontologyGeneral Agricultural and Biological SciencesToothEvolution; international journal of organic evolution
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Adaptation of turnip mosaic potyvirus to a specific niche reduces its genetic and environmental robustness

2020

Robustness is the preservation of the phenotype in the face of genetic and environmental perturbations. It has been argued that robustness must be an essential fitness component of RNA viruses owed to their small and compacted genomes, high mutation rates and living in ever-changing environmental conditions. Given that genetic robustness might hamper possible beneficial mutations, it has been suggested that genetic robustness can only evolve as a side-effect of the evolution of robustness mechanisms specific to cope with environmental perturbations, a theory known as plastogenetic congruence. However, empirical evidences from different viral systems are contradictory. To test how adaptation…

0106 biological sciencesMutation rateNicherobustness010603 evolutionary biology01 natural sciencesMicrobiologyGenome03 medical and health sciencesplant virusVirologythermal fluctuationsAcademicSubjects/MED00860experimental evolutionplastogenetic congruence030304 developmental biologyvirus evolution0303 health sciencesExperimental evolutionbiologyAcademicSubjects/SCI01130AcademicSubjects/SCI02285PotyvirusRobustness (evolution)biology.organism_classificationPhenotypeEvolutionary biologyViral evolutionmutagenesisResearch Article
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Temperature-associated habitat selection in a cold-water marine fish.

2015

1. Habitat selection is a complex process, which involves behavioural decisions guided by the multiple needs and constraints faced by individuals. Climate-induced changes in environmental conditions may alter those trade-offs and resulting habitat use patterns. 2. In this study, we investigated the effect of sea temperature on habitat selection and habitat use of acoustically tagged Atlantic cod (Gadus morhua) at the Norwegian Skagerrak coast. 3. Significant relationships between ocean temperature and habitat selection and use were found. Under favourable sea temperature thresholds (<16 °C), cod selected vegetated habitats, such as eelgrass and macroalgae beds, available in shallow areas. S…

0106 biological sciencesOceans and SeasPopulationBiologyTrade-off010603 evolutionary biology01 natural sciencesGadusAnimalsEcosystemeducationEcology Evolution Behavior and SystematicsEcosystemeducation.field_of_studyEcologyNorway010604 marine biology & hydrobiologyfungiMarine reserveTemperaturebiology.organism_classificationFisherySea surface temperatureHabitatGadus morhuaAnimal Science and ZoologyAtlantic cod
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