Search results for "ASTER"

showing 10 items of 2223 documents

Aberrant splicing of the Drosophila melanogaster phenylalanine hydroxylase pre-mRNA caused by the insertion of a B104/roo transposable element in the…

1999

Abstract We report the insertion of the transposable element B104 in the Phenylalanine hydroxylase gene of the Drosophila mutant Henna-recessive 3 . Its presence alters the Phenylalanine hydroxylase splicing pattern, producing at least two aberrant mRNAs which contain part of the B104 sequence interrupting the coding region. This aberrant splicing is provoked by the use of a cryptic donor site encoded by the B104 3′ long terminal repeat in combination with either the gene intron 3 acceptor site or a novel acceptor site generated by the target duplication caused by transposition. One of them, referred as mRNA type 1, encodes a truncated protein that could be predictably non-functional. In mR…

Transposable elementDNA ComplementaryPhenylalanine hydroxylaseMolecular Sequence DataGenes InsectBiologyBiochemistryRNA PrecursorsAnimalsCoding regionAmino Acid SequenceMolecular BiologyGeneBase SequenceIntronPhenylalanine HydroxylaseExonsTryptophan hydroxylaseMolecular biologyAlternative SplicingMutagenesis InsertionalDrosophila melanogasterInsect ScienceRNA splicingDNA Transposable Elementsbiology.proteinPrecursor mRNAInsect Biochemistry and Molecular Biology
researchProduct

Retrotransposon silencing and telomere integrity in somatic cells of Drosophila depends on the cytosine-5 methyltransferase DNMT2

2009

Here we show that the cytosine-5 methyltransferase DNMT2 controls retrotransposon silencing in Drosophila somatic cells. In Drosophila, significant DNMT2-dependent DNA methylation occurs during early embryogenesis. Suppression of white gene silencing by Mt2 (Dnmt2) null mutations in variegated P[w(+)] element insertions identified functional targets of DNMT2. The enzyme controls DNA methylation at retrotransposons in early embryos and initiates histone H4K20 trimethylation catalyzed by the SUV4-20 methyltransferase. In somatic cells, loss of DNMT2 eliminates H4K20 trimethylation at retrotransposons and impairs maintenance of retrotransposon silencing. In Dnmt2 and Suv4-20 null genotypes, re…

Transposable elementDNA-Cytosine MethylasesEmbryo NonmammalianMethyltransferaseRetroelementsSomatic cellRetrotransposonGene Knockout TechniquesDrosophilidaeGeneticsAnimalsDrosophila ProteinsGene silencingDNA (Cytosine-5-)-MethyltransferasesGene SilencingCrosses GeneticIn Situ Hybridization FluorescenceGeneticsbiologyfungifood and beveragesHistone-Lysine N-MethyltransferaseDNA MethylationTelomerebiology.organism_classificationTelomereMutationDrosophilaDrosophila melanogasterNature Genetics
researchProduct

Invasion of thehobo transposable element studied byin situ hybridization on polytene chromosomes ofDrosophila melanogaster

1994

The invasion kinetics of hobo transposable element in the Drosophila melanogaster genome was studied by in situ hybridization on the polytene chromosomes. Six independent lines of Drosophila melanogaster flies that had been previously transformed by microinjection of the pHFL1 plasmid containing a complete hobo element were followed over 50 generations. We observed that hobo elements were scattered on each of the chromosome arms, with more insertion sites on the 3R arm. The total number of insertion sites remains quite small, between four and six, at generation 52. On the 2R arm, a short inversion appeared once at generation 52. Most of the integration sites reported here were already descr…

Transposable elementEmbryo NonmammalianCentromerePlant ScienceIn situ hybridizationGenomeChromosomesPlasmidGeneticsMelanogasterAnimalsIn Situ HybridizationGeneticsGenomePolytene chromosomebiologyChromosome MappingChromosomeGeneral Medicinebiology.organism_classificationBlotting SouthernDrosophila melanogasterInsect ScienceDNA Transposable ElementsAnimal Science and ZoologyDrosophila melanogasterGenetica
researchProduct

Insertion mutation inactivates the expression of the recessive oncogene lethal(2)giant larvae of Drosophila melanogaster

1986

The Drosophila recessive oncogene lethal(2)giant larvae is located at the extreme left end of the second chromosome close to telomeric repetitive sequences. Of the 20 l(2)gl mutant alleles isolated from wild flies in widespread populations of the Soviet Union and California, all but two appear to represent large deletions which have removed the telomeric repetitive sequences and l(2)gl single copy sequences (Mechler et al. 1985). We have analyzed the structure of the two exceptions: the l(2)glGB52 mutation results from the insertion of a single transposable element of the B104 or roo family, whereas the more complex rearrangements of the l(2)glDV275 mutation consists of an 8 kb interstitial…

Transposable elementGeneticsMutantMolecular cloningBiologybiology.organism_classificationMolecular biologychemistry.chemical_compoundchemistryChromosomal regionGeneticsInsertionDrosophila melanogasterMolecular BiologyGeneDNAMolecular and General Genetics MGG
researchProduct

PGal4 excision reveals the pleiotropic effects of Voila, a Drosophila locus that affects development and courtship behaviour

2001

0016-6723 (Print) Journal Article Research Support, Non-U.S. Gov't; In Drosophila melanogaster, the PGal4 transposon inserted at the chromosomal site 86E1-2 is associated with the Voila1 allele that causes multiple phenotypes. Homozygous Voila1/1 flies rarely reach adulthood and heterozygous Voila1/+ adult males display strong homosexual courtship behaviour. Both normal behavioural and developmental phenotypes were rescued by remobilizing the PGal4 element. Yet, the rescue of heterosexual courtship and of adult viability did not occur in the same strains, indicating that these defects have different genetic origins. Furthermore, many strains showed a partial rescue of both characters. Molec…

Transposable elementMaleHeterozygoteEmbryo Nonmammalianmedia_common.quotation_subjectSexual BehaviorLocus (genetics)Nerve Tissue ProteinsLethalCourtshipSexual Behavior AnimalGeneticsAnimal/*physiologyAnimalsDrosophila ProteinsNerve Tissue Proteins/geneticsAlleleDrosophila melanogaster/*physiologyLarva/*growth & developmentmedia_commonGeneticsNonmammalianbiologyCourtship displayReproductionHomozygoteNuclear ProteinsHeterozygote advantageGeneral MedicineHomosexualitybiology.organism_classificationReproduction/geneticsNuclear Proteins/geneticsSurvival RateDrosophila melanogasterGenesEmbryoLarvaDNA Transposable ElementsGenes LethalFemaleDrosophila melanogaster5' Untranslated RegionsDrosophila ProteinTranscription Factors
researchProduct

Spread of the autonomous transposable element hobo in the genome of Drosophila melanogaster.

1995

The transposable element hobo has been introduced into the previously empty Drosophila melanogaster strain Hikone so that its dynamics can be followed and it can be compared with the P element. Five transformed lines were followed over 58 generations. The results were highly dependent on the culture temperature, the spread of hobo element being more efficient at 25 degrees C. The multiplication of hobo sequences resulted in a change in the features of these lines in the hobo system of hybrid dysgenesis. The number of hobo elements remained low (two to seven copies) and the insertions always corresponded to complete sequences. Our findings suggest that, despite their genetic similarities, P …

Transposable elementMalebiologyStrain (biology)Genes InsectDNAbiology.organism_classificationGenomeP elementBlotting SouthernDrosophila melanogasterGene Expression RegulationEvolutionary biologyDNA Transposable ElementsGeneticsDNA Transposable ElementsAnimalsHybridization GeneticFemaleDrosophila melanogasterMolecular BiologyGeneEcology Evolution Behavior and SystematicsCrosses GeneticPlasmidsMolecular biology and evolution
researchProduct

The evolutionary genetics of the hobo transposable element in the Drosophila melanogaster complex.

1994

Hobo elements are a family of transposable elements found in Drosophila melanogaster and its three sibling species: D. simulans, D. mauritiana and D. sechellia. Studies in D. melanogaster have shown that hobo may be mobilized, and that the genetic effects of such mobilizations included the general features of hybrid dysgenesis: mutations, chromosomal rearrangements and gonadal dysgenis in F1 individuals. At the evolutionary level some hobo-hybridizing sequences have also been found in the other members of the melanogaster subgroup and in many members of the related montium subgroup. Surveys of older collected strains of D. melanogaster suggest that complete hobo elements were absent prior t…

Transposable elementMolecular Sequence DataPlant ScienceDNA sequencingChromosomesSpecies SpecificityGeneticsMelanogasterAnimalsAmino Acid SequenceMauritianaSequence DeletionGeneticsbiologyBase SequenceHuman evolutionary geneticsGeneral Medicinebiology.organism_classificationBiological EvolutionHuman geneticsDrosophila melanogasterEvolutionary biologyInsect ScienceHorizontal gene transferDNA Transposable ElementsAnimal Science and ZoologyDrosophilaDrosophila melanogasterGenetica
researchProduct

Tirant is a new member of the gypsy family of retrotransposons in Drosophila melanogaster.

2000

In this paper, we propose a consensus sequence for a putative complete Tirant retrotransposon. Several defective copies, as well as relevant sequences available in databases have been analyzed. The putative complete Tirant element is 8533 bp long, and presents all the structural features of a retroviruslike transposable element of the gypsy family. It contains three ORFs (open reading frames) that encode putative products resembling the retroviral Gag, Pol, and Env proteins. Southern blot analyses show that complete and defective Tirant elements are widespread in Drosophila melanogaster. The different hybridization patterns observed in several natural populations of this species suggest tha…

Transposable elementRetroelementsvirusesRetrotransposonGenes envOpen Reading FramesPhylogeneticsConsensus SequenceGeneticsConsensus sequenceAnimalsORFSMolecular BiologyPhylogenySouthern blotGeneticsbiologyBase SequenceTerminal Repeat SequencesGeneral Medicinebiology.organism_classificationGenes gagGenes polOpen reading frameDrosophila melanogasterDrosophila melanogasterSequence AlignmentBiotechnologyGenome
researchProduct

Drosophila melanogaster histone H2B retropseudogene is inserted into a region rich in transposable elements.

1998

We have isolated and characterized the genomic sequence of a Drosophila melanogaster histone H2B pseudogene that is localized outside of the cluster of the replication-dependent histone genes and has all the properties of a retropseudogene. It is highly homologous to the transcribed region of the D. melanogaster histone H2B gene, but not to its flanking regions, and is surrounded by short direct repeats. The pseudogene contains several point mutations that preclude its translation. The sequence of the 3' region of this pseudogene is compatible with the hypothesis that the 3' terminal stem-loop structure of the histone H2B mRNA has served as a primer for the reverse transcription event from …

Transposable elementanimal structuresPseudogeneMolecular Sequence DataLocus (genetics)HistonesOpen Reading FramesGeneticsHistone H2BMelanogasterDirect repeatAnimalsAmino Acid SequenceRNA MessengerMolecular BiologyGeneticsbiologyBase SequenceGeneral MedicineDNAbiology.organism_classificationHistoneDrosophila melanogasterbiology.proteinDNA Transposable ElementsDrosophila melanogasterPseudogenesBiotechnologyGenome
researchProduct

Deep stratosphere-to-troposphere transport (STT) over SE Europe: a complex case study captured by enhanced <sup>7</sup>Be…

2005

Abstract. In this study we present a complex case study of a Stratosphere-to-Troposphere Transport (STT) event down to the surface of a low topography region in Northern Greece, during the second fortnight of March 2000. During this event our surface station at Livadi (23°15 E/40°32 N, 850 m a.s.l.), was influenced by very different synoptic systems developing over Eastern Europe, N. America and the N. Atlantic, the last one evolving to a cut-off low over France/Spain. This is the first study, to our knowledge, that presents a down to the surface STT event in the eastern Mediterranean. The intrusion is primarily captured with the use of the cosmogenic radionuclide 7Be, which increased to 9.…

TroposphereIntrusionRadionuclideEastern mediterraneanPotential vorticityClimatologyConjunction (astronomy)Environmental scienceStratosphereSea level
researchProduct