Search results for "BM"
showing 10 items of 1459 documents
Mapping and Quantification of tRNA 2′-O-Methylation by RiboMethSeq
2018
Current development of epitranscriptomics field requires efficient experimental protocols for precise mapping and quantification of various modified nucleotides in RNA. Despite important advances in the field during the last 10 years, this task is still extremely laborious and time-consuming, even when high-throughput analytical approaches are employed. Moreover, only a very limited subset of RNA modifications can be detected and only rarely be quantified by these powerful techniques. In the past, we developed and successfully applied alkaline fragmentation-based RiboMethSeq approach for mapping and precise quantification of multiple 2'-O-methylation residues in ribosomal RNA. Here we descr…
AlkAniline-Seq: A Highly Sensitive and Specific Method for Simultaneous Mapping of 7-Methyl-guanosine (m7G) and 3-Methyl-cytosine (m3C) in RNAs by Hi…
2021
Epitranscriptomics is an emerging field where the development of high-throughput analytical technologies is essential to profile the dynamics of RNA modifications under different conditions. Despite important advances during the last 10 years, the number of RNA modifications detectable by next-generation sequencing is restricted to a very limited subset. Here, we describe a highly efficient and fast method called AlkAniline-Seq to map simultaneously two different RNA modifications: 7-methyl-guanosine (m7G) and 3-methyl-cytosine (m3C) in RNA. Our protocol is based on three subsequent chemical/enzymatic steps allowing the enrichment of RNA fragments ending at position n + 1 to the modified nu…
Use of Specific Chemical Reagents for Detection of Modified Nucleotides in RNA
2011
International audience; Naturally occurring cellular RNAs contain an impressive number of chemically distinct modified residues which appear posttranscriptionally, as a result of specific action of the corresponding RNA modification enzymes. Over 100 different chemical modifications have been identified and characterized up to now. Identification of the chemical nature and exact position of these modifications is typically based on 2D-TLC analysis of nucleotide digests, on HPLC coupled with mass spectrometry, or on the use of primer extension by reverse transcriptase. However, many modified nucleotides are silent in reverse transcription, since the presence of additional chemical groups fre…
Water-induced local ordering of chitosan polymer chains in thin layer films
2015
International audience; Carbon-13 NMR (CP-MAS and FSLG 1H–13C HETCOR) have been applied to chitosan salt films synthesized in acetic acid and exposed to different relative humidity environments (32% or 75%) at 20 °C for 1 month. It gives insight in the relationship between structure and functional properties according to the hydration level of this biomaterial as a film. The acetate ions trapped in the chitosan act as structuring agents between chitosan chains for the low hydration state. But, increasing the moisture content induces spontaneous removal of acetic acid and a subsequent modification in the film structure, with an increase in local ordering. HETCOR experiments also showed a mul…
Structural studies of adsorbed protein (betalactoglobulin) on natural clay (montmorillonite)
2014
International audience; In this work, the adsorption of a small globular protein (betalactoglobulin, BLG), on a natural montmorillonite clay (Mt) was investigated in acidic buffer (pH = 3). The combination of different characterization techniques such as zetametry, X-ray diffraction, transmission electronic microscopy, fluorescence and solid state nuclear magnetic resonance spectroscopies shed light on the interaction mechanism between the clay mineral and the proteins. For low BLG concentration, a slight increase of the interlayer spacing of the clay mineral was noticed as well as structural changes of the protein. In contrast, as the concentration of BLG increased, the adsorption led to a…
Experimental design approach in the synthesis of molecularly imprinted polymers specific for iprodione fungicide
2015
International audience; An experimental design (ED) approach was applied to study the weight of three factors in the synthesis of a molecularly imprinted polymer (MIP) specific for iprodione fungicide. The objective was to obtain a high specific polymer with the best performance of iprodione binding. Thirteen iprodione-imprinted polymers and 13 non-imprinted polymers (NIP) were synthesized according to ED having 3 influencing factors: the polymerization method, the crosslinker nature and the functional monomer type. For each factor, two levels were studied: bulk and precipitation polymerization for the first factor, trimethylolpropane trimethacrylate (TRIM) and ethylene glycol dimethacrylat…
Pauls rectifiable and purely Pauls unrectifiable smooth hypersurfaces
2020
This paper is related to the problem of finding a good notion of rectifiability in sub-Riemannian geometry. In particular, we study which kind of results can be expected for smooth hypersurfaces in Carnot groups. Our main contribution will be a consequence of the following result: there exists a -hypersurface without characteristic points that has uncountably many pairwise non-isomorphic tangent groups on every positive-measure subset. The example is found in a Carnot group of topological dimension 8, it has Hausdorff dimension 12 and so we use on it the Hausdorff measure . As a consequence, we show that any Lipschitz map defined on a subset of a Carnot group of Hausdorff dimension 12, with…
Stroke Cognitive Medical Assistant (StrokeCMA)
2018
Stroke is the number two killer after heart disease since it is responsible for almost 10% of all deaths worldwide. The main problem with a stroke is a significant delay in treatment that happened mainly due to inappropriate detection of stroke symptoms or inability of a person to perform further necessary actions, and might cause death, permanent disabilities, as well as more expensive treatment and rehabilitation. Nowadays assessment of a stroke is done by human, following widely adopted FAST approach of stroke assessment. Since a human factor become one of the causes of treatment delay, offered solution will try to minimize this factor. Artificial Intelligence, Cognitive Computing, Machi…
Papel de las proteínas BMPs en la regulación de la neurogénesis hipocampal adulta
2022
En determinadas regiones del cerebro de los mamíferos, nuevas neuronas nacen a lo largo de la vida del individuo debido a la existencia de células madre neurales (NSCs). La neurogénesis en el cerebro adulto ocurre en dos zonas determinadas: la zona subventricular (ZSV) de los ventrículos laterales y la zona subgranular (ZSG) del giro dentado del hipocampo. Señales locales, como los ligandos de la familia de las Wnt, regulan la proliferación y diferenciación de las NSCs. Otras señales, como las Proteínas Morfogenéticas de Hueso (BMPs), están implicadas en el mantenimiento de la quiescencia de las NSCs. Sin embargo, los mecanismos moleculares que subyacen a este proceso no están tot…
Rheological Properties and Flavor Release
2010
International audience; Food texture may be of concern at different levels but is a main concern during food consumption. In fact, the way to handle food depends a lot on its texture: beyond interindividual differences, liquid products are swallowed more rapidly than solid products. e strength applied by teeth to bite food products and to transform the food bolus depends a lot on food stiffness. When food is eaten, it undergoes many modifications due to mastication, but also dilution through the addition of saliva, and variation in temperature. ese modifications result in great changes in food structure and texture, and thus involve significant changes in the partition of aroma compounds be…