Search results for "BSI"

showing 10 items of 468 documents

Description of Klebsiella spallanzanii sp. nov. and of Klebsiella pasteurii sp. nov

2019

AbstractKlebsiella oxytocacauses opportunistic human infections and post-antibiotic haemorrhagic diarrhoea. ThisEnterobacteriaceaespecies is genetically heterogeneous and is currently subdivided into seven phylogroups (Ko1 to Ko4, Ko6 to Ko8). Here we investigated the taxonomic status of phylogroups Ko3 and Ko4. Genomic sequence-based phylogenetic analyses demonstrate that Ko3 and Ko4 formed well-defined sequence clusters related to, but distinct from,Klebsiella michiganensis(Ko1),Klebsiella oxytoca(Ko2),K. huaxiensis(Ko8) andK. grimontii(Ko6). The average nucleotide identity of Ko3 and Ko4 were 90.7% withK. huaxiensisand 95.5% withK. grimontii, respectively. In addition, three strains ofK.…

Microbiology (medical)KlebsiellaEuropean Nucleotide Archivelcsh:QR1-502[SDV.BID]Life Sciences [q-bio]/BiodiversityphylogenyMALDI-ToF mass spectrometryMicrobiologylcsh:MicrobiologyMicrobiology03 medical and health scienceschemistry.chemical_compoundtaxonomyblaOXYPhylogenetics[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyFeces1183 Plant biology microbiology virologyOriginal Research030304 developmental biologyHuman feces0303 health sciencesbiologyPhylogenetic tree030306 microbiologyKlebsiella oxytocaSimmons' citrate agarbiology.organism_classification16S ribosomal RNArpoBEnterobacteriaceaegenome sequencingchemistrybla OXYTaxonomy (biology)[SDV.SPEE]Life Sciences [q-bio]/Santé publique et épidémiologieKlebsiella oxytoca complex
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On-Demand Isolation of Bacteriophages Against Drug-Resistant Bacteria for Personalized Phage Therapy

2015

Bacteriophages are bacterial viruses, capable of killing even multi-drug resistant bacterial cells. For this reason, therapeutic use of phages is considered as a possible alternative to conventional antibiotics. However, phages are very host specific in comparison to wide-spectrum antibiotics and thus preparation of phage-cocktails beforehand against pathogens can be difficult. In this study, we evaluate whether it may be possible to isolate phages on-demand from environmental reservoir. We attempted to enrich infectious bacteriophages from sewage against nosocomial drug-resistant bacterial strains of different medically important species in order to evaluate the probability of discovering …

Microbiology (medical)Phage cocktailsantibiotic resistancephage therapyPhage therapyKlebsiella pneumoniaevirusesmedicine.medical_treatmentlcsh:QR1-502MRSABiologyta3111medicine.disease_causeMicrobiologybakteriofagitlcsh:MicrobiologyMicrobiologyAntibiotic resistancephage cocktailsmedicineBacteriophagesVancomycin-resistant EnterococcusOriginal ResearchPseudomonas aeruginosata1183biology.organism_classificationVirologyMethicillin-resistant Staphylococcus aureusfagiterapia3. Good healthAcinetobacter baumanniiESBLBacterial virusantibioottiresistenssiFrontiers in Microbiology
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Multiclonal emergence of carbapenem-resistant Klebsiella pneumoniae in Tuscany, Italy

2010

Microbiology (medical)Settore MED/07 - Microbiologia E Microbiologia ClinicaImipenemGenotypemedicine.drug_classCarbapenem resistant Klebsiella pneumoniaemedicine.medical_treatmentAntibioticsMicrobial Sensitivity TestsBiologySettore MED/42 - Igiene Generale E ApplicataMeropenembeta-Lactam Resistancebeta-LactamasesMicrobiologychemistry.chemical_compoundmedicineHumansPharmacology (medical)Molecular EpidemiologyKlebsiella pneumoniae resistenza ai carbapenemi multiclonaleGeneral MedicineDNA FingerprintingAnti-Bacterial AgentsBacterial Typing TechniquesElectrophoresis Gel Pulsed-FieldKlebsiella InfectionsMultiple drug resistanceKlebsiella pneumoniaePhenotypeInfectious DiseasesCarbapenemsItalychemistryBeta-lactamaseErtapenemmedicine.drugBeta lactam antibioticsInternational Journal of Antimicrobial Agents
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Populations of extended-spectrum β-lactamase-producing Escherichia coli and Klebsiella pneumoniae are different in human-polluted environment and foo…

2021

Abstract Objectives To assess the extent to which food items are a source of extended-spectrum β-lactamase (ESBL) -producing Escherichia coli (ESBL-Ec) and ESBL-producing Klebsiella pneumoniae (ESBL-Kp) for humans in five European cities. Methods We sampled 122 human polluted (hp)-environments (sewers and polluted rivers, as a proxy of human contamination) and 714 food items in Besancon (France), Geneva (Switzerland), Sevilla (Spain), Tubingen (Germany) and Utrecht (The Netherlands). A total of 254 ESBL-Ec and 39 ESBL-Kp isolates were cultured. All genomes were fully sequenced to compare their sequence types (ST) and core genomes, along with the distribution of blaESBL genes and their genet…

Microbiology (medical)Veterinary medicineKlebsiella pneumoniaeEscherichia coli K. pneumoniae ESBL food environmentBiologyEnvironmentPolluted environmentmedicine.disease_causebeta-LactamasesK. pneumoniae03 medical and health sciencesFood chainPlasmidData sequencesExtended-spectrum β-lactamasemedicinepolycyclic compoundsEscherichia coliHumansEscherichia coliEscherichia coli Infections030304 developmental biologyddc:6160303 health sciences030306 microbiologyK pneumoniaeGeneral MedicineSequence typesbiochemical phenomena metabolism and nutritionbiology.organism_classificationbacterial infections and mycoses3. Good healthAnti-Bacterial AgentsKlebsiella InfectionsKlebsiella pneumoniaeInfectious Diseases[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyESBLFoodbacteria[SDV.MHEP]Life Sciences [q-bio]/Human health and pathologyPlasmids
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Systematic Comparison of Epidemic and Non-Epidemic Carbapenem Resistant Klebsiella pneumoniae Strains

2021

Over the past few decades, extensively drug resistant (XDR) resistant Klebsiella pneumoniae has become a notable burden to healthcare all over the world. Especially carbapenemase-producing strains are problematic due to their capability to withstand even last resort antibiotics. Some sequence types (STs) of K. pneumoniae are significantly more prevalent in hospital settings in comparison to other equally resistant strains. This provokes the question whether or not there are phenotypic characteristics that may render certain K. pneumoniae more suitable for epidemic dispersal between patients, hospitals, and different environments. In this study, we selected seven epidemic and non-epidemic ca…

Microbiology (medical)antibiotic resistanceImmunologyextended-spectrum beta-lactamasevirulenssiepidemiatMicrobiologyepidemicbakteeritvirulenceInfectious DiseasesKlebsiella-bakteeritXDR Klebsiella pneumoniaeantibioottiresistenssi
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Beta-Lactam Sensitive Bacteria Can Acquire ESBL-Resistance via Conjugation after Long-Term Exposure to Lethal Antibiotic Concentration

2020

Beta-lactams are commonly used antibiotics that prevent cell-wall biosynthesis. Beta-lactam sensitive bacteria can acquire conjugative resistance elements and hence become resistant even after being exposed to lethal (above minimum inhibitory) antibiotic concentrations. Here we show that neither the length of antibiotic exposure (1 to 16 h) nor the beta-lactam type (penam or cephem) have a major impact on the rescue of sensitive bacteria. We demonstrate that an evolutionary rescue can occur between different clinically relevant bacterial species (Klebsiella pneumoniae and Escherichia coli) by plasmids that are commonly associated with extended-spectrum beta-lactamase (ESBL) positive hospita…

Microbiology (medical)antibiotic resistancemedicine.drug_classKlebsiella pneumoniaeAntibioticsextended-spectrum beta-lactamaseBiologymedicine.disease_causeBiochemistryMicrobiologyArticleMicrobiologybakteerit03 medical and health sciencesplasmiditPlasmidAntibiotic resistancemedicineCRISPRPharmacology (medical)Klebsiella-bakteeritGeneral Pharmacology Toxicology and PharmaceuticsEscherichia coli030304 developmental biology0303 health sciencesCephemconjugative plasmid.030306 microbiologylcsh:RM1-950antibiootitbiology.organism_classification3. Good healthExtended-spectrum beta-lactamaseInfectious Diseaseslcsh:Therapeutics. Pharmacologyconjugative plasmidevolutionary rescuehorisontaalinen geeninsiirtoBacteriakolibakteeritantibioottiresistenssi
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Outbreak of CTX-M-15-producing Klebsiella pneumoniae of sequence type 199 in a Latvian teaching hospital

2010

Dumpis U, Iversen A, Balode A, Saule M, Miklasevics E, Giske CG. Outbreak of CTX-M-15-producing Klebsiella pneumoniae of sequence type 199 in a Latvian teaching hospital. APMIS 2010; 118: 713–6. Previous studies on the epidemiology of extended-spectrum β-lactamase (ESBL)-producing Enterobacteriaceae in Latvia are lacking. ESBL-producing Klebsiella pneumoniae (n = 32) were subjected to pulsed-field gel electrophoresis (PFGE) and selected isolates to multi-locus sequence typing (MLST). Species identification and susceptibility testing were performed using VITEK2, and sequencing of blaCTX-M was performed in selected isolates. PFGE revealed one major clone (n = 23), with most of the isolates de…

Microbiology (medical)biologyKlebsiella pneumoniaemedicine.medical_treatmentOutbreakGeneral Medicinebiochemical phenomena metabolism and nutritionbacterial infections and mycosesbiology.organism_classificationVirologyEnterobacteriaceaePathology and Forensic MedicineMicrobiologychemistry.chemical_compoundchemistryPulsed-field gel electrophoresisBeta-lactamasemedicineImmunology and AllergyMultilocus sequence typingTypingErtapenemAPMIS
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The power and limitations of genomic surveillance of bacteria.

2019

Microbiology (medical)biologyMolecular epidemiologyKlebsiella pneumoniaeHigh-Throughput Nucleotide SequencingBacterial InfectionsGenomicsmedicine.disease_causebiology.organism_classificationMicrobiologyDNA sequencingNeisseria gonorrhoeaeMicrobiologyAnti-Bacterial AgentsKlebsiella InfectionsGonorrheaKlebsiella pneumoniaeAntibiotic resistanceDrug Resistance Multiple BacterialEpidemiological MonitoringNeisseria gonorrhoeaemedicineHumansMicrobial genomeBacteriaFuture microbiology
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Regional Variation of Extended-Spectrum Beta-Lactamase (ESBL)-Producing Enterobacterales, Fluoroquinolone-Resistant Salmonella enterica and Methicill…

2020

Background: Antimicrobial resistance (AMR) thwarts the curative power of drugs and is a present-time global problem. We present data on antimicrobial susceptibility and resistance determinants of bacteria the WHO has highlighted as being key antimicrobial resistance concerns in Africa, to strengthen knowledge of AMR patterns in the region. Methods: Blood, stool, and urine specimens of febrile patients, aged between ≥ 30 days and ≤ 15 years and hospitalized in Burkina Faso, Gabon, Ghana, and Tanzania were cultured from November 2013 to March 2017 (Patients > 15 years were included in Tanzania). Antimicrobial susceptibility testing was performed for all Enterobacterales and Staphylococcus aur…

Microbiology (medical)sub-Saharan AfricaSalmonellaextended-spectrum beta-lactamase-(ESBL)Klebsiella pneumoniaemedicine.medical_treatmentlcsh:QR1-502Biologymethicillin-resistant Staphylococcus aureusmedicine.disease_causeMicrobiologylcsh:MicrobiologyMicrobiology03 medical and health sciencesAntibiotic resistanceEnterobacteralesparasitic diseasesmedicineantimicrobial resistanceOriginal Research030304 developmental biologyfever0303 health sciences030306 microbiologySalmonella entericabiochemical phenomena metabolism and nutritionbiology.organism_classificationbacterial infections and mycosesMethicillin-resistant Staphylococcus aureusStaphylococcus aureusSalmonella entericaBeta-lactamaseMultilocus sequence typingFrontiers in microbiology
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Emission Taxes, Feed-in Subsidies and the Investment in a Clean Technology by a Polluting Monopoly

2019

The paper studies the use of emission taxes and feed-in subsidies for the regulation of a monopoly that can produce the same good with a technology that employs a polluting input and a clean technology. The second-best tax and subsidy are calculated solving a two-stage policy game between the regulator and the monopoly with the regulator acting as the leader of the game. We find that the second-best tax rate is the Pigouvian tax. The tax implements the efficient level of the dirty output but does not affect the total output. On the other hand, the subsidy leads to the monopoly to reduce the dirty output but also to increase the total output. This increase in total output may yield a larger …

MicroeconomicsMarginal costbusiness.industryYield (finance)EconomicsSubsidyMarket powerClean technologybusinessInvestment (macroeconomics)MonopolyTax rateSSRN Electronic Journal
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