Search results for "BST"

showing 10 items of 10311 documents

Recombinant laccase from Pediococcus acidilactici CECT 5930 with ability to degrade tyramine

2017

Biogenic amines degradation by bacterial laccases is little known, so we have cloned and heterologously expressed, in E. coli, a new laccase from Pediococcus acidilactici CECT 5930 (Lpa5930), a lactic acid bacterium commonly found in foods able to degrade tyramine. The recombinant enzyme has been characterized by physical and biochemical assays. Here we report the optimization of expression and purification procedures of this laccase. DNA encoding sequence of laccase from P. acidilactici was amplified by PCR and cloned into the expression plasmid pET28a for induction by isopropyl-β-D-thiogalactoipyranoside. Protein expression was performed in E. coli BL21(DE3) harboring pGro7 plasmid expres…

0106 biological sciences0301 basic medicineArabinoseMolecular biologylcsh:MedicineLaccasesBiochemistryBiotecnologia01 natural sciencesSubstrate Specificitylaw.inventionDatabase and Informatics Methodschemistry.chemical_compoundlawRecombinant Protein PurificationCloning MolecularAmineslcsh:Sciencechemistry.chemical_classificationMultidisciplinaryABTSbiologyOrganic CompoundsTemperatureHydrogen-Ion ConcentrationTyramineRecombinant ProteinsEnzymesChemistryRecombination-Based AssayBiochemistryPhysical SciencesRecombinant DNAElectrophoresis Polyacrylamide GelOxidation-ReductionSequence AnalysisResearch ArticleProtein PurificationBioinformaticsTyramineLibrary ScreeningDNA constructionResearch and Analysis Methods03 medical and health sciencesBacterial ProteinsSequence Motif Analysis010608 biotechnologyAmino Acid SequenceBenzothiazolesPediococcus acidilacticiLaccaseMolecular Biology Assays and Analysis TechniquesBase SequenceMolecular massLaccaseOrganic Chemistrylcsh:RChemical CompoundsBiology and Life SciencesProteinsPediococcus acidilacticiSequence Analysis DNAbiology.organism_classificationMolecular biology techniques030104 developmental biologyEnzymechemistryPlasmid ConstructionEnzymologySpectrophotometry Ultravioletlcsh:QSulfonic AcidsEnzimsProteïnesPurification TechniquesPLOS ONE
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Specimens at the Center: An Informatics Workflow and Toolkit for Specimen-level analysis of Public DNA database data

2016

Pham, Kasey K. [et al.]

0106 biological sciences0301 basic medicineBiodiversityPlant ScienceComputational biologyBiology010603 evolutionary biology01 natural sciencesSet (abstract data type)03 medical and health sciencesBotanyDNA databaseGeneticsSupermatrixEcology Evolution Behavior and SystematicsPhylogenetic treePhylogenetic workflowTaxon disparity index (TDI)030104 developmental biologyWorkflowCarexGenBankIdentity (object-oriented programming)CyperaceaeSupermatrixSpecimen-level data
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Loop Mediated Isothermal Amplification: Principles and Applications in Plant Virology

2020

In the last decades, the evolution of molecular diagnosis methods has generated different advanced tools, like loop-mediated isothermal amplification (LAMP). Currently, it is a well-established technique, applied in different fields, such as the medicine, agriculture, and food industries, owing to its simplicity, specificity, rapidity, and low-cost efforts. LAMP is a nucleic acid amplification under isothermal conditions, which is highly compatible with point-of-care (POC) analysis and has the potential to improve the diagnosis in plant protection. The great advantages of LAMP have led to several upgrades in order to implement the technique. In this review, the authors provide an overview r…

0106 biological sciences0301 basic medicineBst DNA polymeraseComputer scienceLoop-mediated isothermal amplificationSettore BIO/05 - ZoologiaviroidsPlant VirologyPlant ScienceReviewvirus01 natural sciences03 medical and health sciencesLAMPplant virologyprimersEcology Evolution Behavior and SystematicsEcologyviroid<i>Bst</i> DNA polymeraseBotanySettore AGR/12 - Patologia Vegetalereal-time monitoringeye diseasesDiagnosis methodsVisualizationprimer030104 developmental biologyQK1-989viruBiochemical engineeringloop-mediated isothermal amplification010606 plant biology & botanyPlants
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PNR-35CNS HGNET-BCOR - MOLECULAR CHARACTERIZATION AND IDENTIFICATION OF POSSIBLE THERAPEUTIC TARGETS OF A NEW BRAIN TUMOR ENTITY

2016

0106 biological sciences0301 basic medicineCancer Researchbusiness.industryBrain tumorComputational biologymedicine.disease01 natural sciencesAbstracts03 medical and health sciences030104 developmental biologyText miningOncology010608 biotechnologymedicineNeurology (clinical)Identification (psychology)businessNeuro-Oncology
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Melatonin in the seasonal response of the aphid Acyrthosiphon pisum.

2018

Aphids display life cycles largely determined by the photoperiod. During the warm long-day seasons, most aphid species reproduce by viviparous parthenogenesis. The shortening of the photoperiod in autumn induces a switch to sexual reproduction. Males and sexual females mate to produce overwintering resistant eggs. In addition to this full life cycle (holocycle), there are anholocyclic lineages that do not respond to changes in photoperiod and reproduce continuously by parthenogenesis. The molecular or hormonal events that trigger the seasonal response (i.e., induction of the sexual phenotypes) are still unknown. Although circadian synthesis of melatonin is known to play a key role in verteb…

0106 biological sciences0301 basic medicineCentral Nervous SystemMaleendocrine systemAANATPhotoperiodCircadian clockZoology01 natural sciencesArylalkylamine N-AcetyltransferaseGeneral Biochemistry Genetics and Molecular BiologyMelatonin03 medical and health sciencesmedicineAnimalsCircadian rhythmEcology Evolution Behavior and SystematicsMelatoninphotoperiodismAphidbiologyfood and beveragesbiology.organism_classificationAcyrthosiphon pisumSexual reproduction010602 entomology030104 developmental biologyInsect ScienceAphidsFemaleSeasonsAgronomy and Crop Sciencehormones hormone substitutes and hormone antagonistsmedicine.drugInsect scienceReferences
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How water-soluble chlorophyll protein extracts chlorophyll from membranes.

2020

Water-soluble chlorophyll proteins (WSCPs) found in Brassicaceae are non-photosynthetic proteins that bind only a small number of chlorophylls. Their biological function remains unclear, but recent data indicate that WSCPs are involved in stress response and pathogen defense as producers of reactive oxygen species and/or Chl-regulated protease inhibitors. For those functions, WSCP apoprotein supposedly binds Chl to become physiologically active or inactive, respectively. Thus, Chl-binding seems to be a pivotal step for the biological function of WSCP. WSCP can extract Chl from the thylakoid membrane but little is known about the mechanism of how Chl is sequestered from the membrane into the…

0106 biological sciences0301 basic medicineChlorophyllCircular dichroismHot Temperaturemedicine.medical_treatmentBiophysicsmacromolecular substances01 natural sciencesBiochemistryLepidiumThylakoids03 medical and health scienceschemistry.chemical_compoundpolycyclic compoundsmedicineBinding sitePlant Proteinschemistry.chemical_classificationReactive oxygen speciesProteasefood and beveragesMembrane ProteinsWaterCell BiologyAmino acid030104 developmental biologyMembraneBiochemistrychemistrySolubilityThylakoidChlorophyll010606 plant biology & botanyBiochimica et biophysica acta. Biomembranes
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’Structural constraints in cyanobacteria-mediated whole-cell biotransformation of methoxylated and methylated derivatives of 2′-hydroxychalcone

2019

Halophilic and freshwater strains of cyanobacteria representing the Oscillatoriales, Nostocales, Chroococcales, and Synechococcales orders of Cyanophyta were examined to determine (i) the resistance of their cultures when suppressed by the presence of exogenous methoxylated and methylated derivatives of 2'-hydroxychalcone, (ii) morphological changes in cells treated with the tested chalcones and, most importantly, (iii) whether these photoautotrophic microorganisms transform chalcone derivatives in a structure- or strain-dependent manner. The growth of cyanobacterial cultures depended on chalcone derivatives and the strain; nevertheless, trends for correlations between these parameters are …

0106 biological sciences0301 basic medicineCyanobacteriaChalconeStereochemistrySubstituentBioengineeringCyanobacteriaHydroxylation01 natural sciencesApplied Microbiology and BiotechnologyMethylationHydroxylation03 medical and health scienceschemistry.chemical_compoundChalconesBiotransformation010608 biotechnologyBiotransformationNostocalesSynechococcalesHydrogenative bioreductionbiologyEthoxylationGeneral Medicinebiology.organism_classification030104 developmental biologychemistryOscillatorialesWhole-cell biotransformationBiotechnologyJournal of Biotechnology
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Carotenoids and Some Other Pigments from Fungi and Yeasts †

2021

Carotenoids are an essential group of compounds that may be obtained by microbiological synthesis. They are instrumental in various areas of industry, medicine, agriculture, and ecology. The increase of carotenoids’ demand at the global market is now essential. At the moment, the production of natural carotenoids is more expensive than obtaining their synthetic forms, but several new approaches/directions on how to decrease this difference were developed during the last decades. This review briefly describes the information accumulated until now about the beneficial effects of carotenoids on human health protection, their possible application in the treatments of various diseases, and their…

0106 biological sciences0301 basic medicineEndocrinology Diabetes and Metabolismpigmentslcsh:QR1-502macromolecular substancesReviewBiologyyeast01 natural sciencesBiochemistrylcsh:Microbiology03 medical and health sciencesHuman health010608 biotechnologyMolecular BiologyBeneficial effectsCarotenoidchemistry.chemical_classificationbusiness.industrycarotenoidsfood and beveragesBiotechnology030104 developmental biologychemistryAgriculturebusinessMetabolites
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Acceptor Specificity of Amylosucrase from Deinococcus radiopugnans and Its Application for Synthesis of Rutin Derivatives

2016

The transglycosylation activity of amylosucrase (ASase) has received significant attention owing to its use of an inexpensive donor, sucrose, and broad acceptor specificity, including glycone and aglycone compounds. The transglycosylation reaction of recombinant ASase from Deinococcus radiopugnans (DRpAS) was investigated using various phenolic compounds, and quercetin-3-O-rutinoside (rutin) was found to be the most suitable acceptor molecule used by DRpAS. Two amino acid residues in DRpAS variants (DRpAS Q299K and DRpAS Q299R), assumed to be involved in acceptor binding, were constructed by site-directed mutagenesis. Intriguingly, DRpAS Q299K and DRpAS Q299R produced 10-fold and 4-fold hig…

0106 biological sciences0301 basic medicineGlycosylationGlycosylationStereochemistryRutinAmino Acid Motifs01 natural sciencesApplied Microbiology and BiotechnologySubstrate Specificity03 medical and health sciencesRutinchemistry.chemical_compoundAmylosucraseGlucosyltransferasesBacterial Proteins010608 biotechnologyDeinococcusBinding siteBinding SitesbiologyGeneral Medicinebiology.organism_classificationAcceptorMolecular Docking SimulationKinetics030104 developmental biologyAglyconechemistryGlucosyltransferasesbiology.proteinDeinococcusBiotechnologyJournal of Microbiology and Biotechnology
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Open data and digital morphology

2017

International audience; Over the past two decades, the development of methods for visualizing and analysing specimens digitally, in three and even four dimensions, has transformed the study of living and fossil organisms. However, the initial promise that the widespread application of such methods would facilitate access to the underlying digital data has not been fully achieved. The underlying datasets for many published studies are not readily or freely available, introducing a barrier to verification and reproducibility, and the reuse of data. There is no current agreement or policy on the amount and type of data that should be made available alongside studies that use, and in some cases…

0106 biological sciences0301 basic medicineLife Sciences & Biomedicine - Other TopicsDYNAMICSComputer scienceDatasets as TopicReuse01 natural sciencesFOSSILSthree-dimensional modelsNaturvetenskapData CurationGeneral Environmental ScienceEcologypalaeontology[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]70General Medicine11 Medical And Health SciencesCCbiomechanics Keywords: digital dataOpen dataPerspectiveComputer data storage[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/PaleontologyGeneral Agricultural and Biological SciencesNatural SciencesLife Sciences & BiomedicineDatasets as Topic1001TISSUESphenotypeBest practiceDigital dataLibrary science25Environmental Sciences & Ecology010603 evolutionary biologyBiological Science DisciplinesGeneral Biochemistry Genetics and Molecular BiologyQA76functional analysisSet (abstract data type)03 medical and health sciencesPALEONTOLOGYBiologySubject Category: Morphology and biomechanics Subject Areas: evolutionvisualizationdigital dataEvolutionary BiologyScience & TechnologyTOMOGRAPHIC MICROSCOPYMorphology and BiomechanicsGeneral Immunology and Microbiologybusiness.industryResearchQHReproducibility of Resultscomputed tomographyPERFORMANCE06 Biological Sciences144Data scienceEVOLUTIONVisualization030104 developmental biologyVISUALIZATION07 Agricultural And Veterinary SciencesbusinessProceedings of the Royal Society B: Biological Sciences
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