Search results for "Base Sequence"

showing 10 items of 1146 documents

Can the grey mould disease of the grape-vine be controlled by yeast?

2000

Botrytis cinerea has been found to be highly pathogenic to ‘Chardonnay’ and ‘Pinot noir’ cultivars of the grape-vine producing the characteristic grey mould symptoms within 7 days of inoculation to the vitro-plants. The yeast Pichia anomala (strain FY-102), isolated from apple skin, was found to be antagonistic to B. cinerea as it completely inhibited the appearance of the grey mould symptoms when grown together. The yeast was responsible for morphological changes such as coagulation and leakage of the cytoplasm of B. cinerea. The pathogen, when applied together with P. anomala, failed to bring about the grey mould symptoms on the grape-vine, suggesting that the yeast could control the expr…

Malusfood.ingredientbiologyPichia anomalaBase SequenceInoculationfungiMolecular Sequence Datafood and beveragesFungi imperfectibiology.organism_classificationMicrobiologyYeastPichiafoodBotanyGeneticsFood MicrobiologyBotrytisAnomalaRosalesMolecular BiologyBotrytis cinereaBotrytisPlant DiseasesFEMS microbiology letters
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Controlled delivery using oligonucleotide-capped mesoporous silica nanoparticles.

2010

Materials scienceBase SequenceOligonucleotideMolecular Sequence DataOligonucleotidesNanoparticleNanotechnologyGeneral ChemistryGeneral MedicineMesoporous silicaSilicon DioxideModels BiologicalCatalysisDrug Delivery SystemsControlled deliveryNanoparticlesPorosityAngewandte Chemie (International ed. in English)
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Draft genome sequence of Pseudomonas corrugata, a phytopathogenic bacterium with potential industrial applications

2014

Pseudomonas corrugata was first described as the causal agent of a tomato disease called 'pith necrosis' yet it is considered as a biological resource in various fields such as biocontrol of plant diseases and production of industrially promising microbial biopolymers (mcl-PHA). Here we report the first draft genome sequence of this species. © 2014 Elsevier B.V.

Mcl-PHAMolecular Sequence DataBiological pest controlBacterial ProteinBioengineeringPseudomonaApplied Microbiology and BiotechnologyBacterial proteinBacterial ProteinsSolanum lycopersicumBiocontrol agentPlant pathogenPseudomonasBotanyLycopersicon esculentumWhole genome sequencingBase SequencebiologyPseudomonasfood and beveragesSequence Analysis DNAGeneral Medicinebiology.organism_classificationCyclic lipopeptideQuorum sensingPseudomonas corrugataQuorum sensingPithGenome BacterialBacteriaBiotechnologyJournal of Biotechnology
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Cloning of Two Putative Ecdysteroid Receptor Isoforms from Tenebrio Molitor and their Developmental Expression in the Epidermis during Metamorphosis

1997

Using the Drosophila EcR-B1 cDNA as a probe, we have cloned the putative ecdysteroid receptor from the mealworm Tenebrio molitor. We have isolated two cDNAs with different 5' termini that contain a complete open reading frame. These two cDNAs encode two proteins with distinct N-terminal regions corresponding to two isoforms. The coleopteran receptor is obviously related to the ecdysteroid receptor of other insects, but shares only 89% and 61% amino acid identities with the DNA-binding and ligand-binding domains of the Drosophila receptor, respectively. Its expression pattern has been examined in the epidermis during the last larval instar and pupal stage of T. molitor, in correlation with t…

MealwormGene isoformReceptors SteroidDNA Complementaryanimal structuresInvertebrate Hormonesmedia_common.quotation_subjectMolecular Sequence DataBiochemistrychemistry.chemical_compoundHemolymphComplementary DNABotanyHemolymphAnimalsAmino Acid SequenceRNA MessengerCloning MolecularMetamorphosisTenebriomedia_commonEcdysteroidBase SequenceSequence Homology Amino AcidbiologyfungiMetamorphosis BiologicalPupaGene Expression Regulation DevelopmentalSequence Analysis DNABlotting Northernbiology.organism_classificationCell biologyOpen reading frameDrosophila melanogasterEcdysteronechemistryLarvaEpidermisEcdysone receptorEuropean Journal of Biochemistry
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A Common Genetic Origin for Early Farmers from Mediterranean Cardial and Central European LBK Cultures

2015

Olalde, Iñigo et al.

Mediterranean climatePopulation geneticsCardial wareCultureEthnic GroupEthnic groupsmigrationGenetic signatureBalkan peninsulaEthnicityHaplotype0601 history and archaeologyMediterranean regionNeolithicAntropologia prehistòrica2. Zero hunger0303 health scienceseducation.field_of_studyFarmersMiddle East060102 archaeologyAgriculture06 humanities and the artsEmigration and ImmigrationGenètica de poblacions humanes -- EuropaItalyHumanGenomic dataEuropean Continental Ancestry GroupPopulationBiologyDNA MitochondrialWhite People03 medical and health sciencesNeolíticPaleogenomicGeneticsHumansBase sequenceFarmerGenetic variationeducationMolecular BiologyDiscoveriesEcology Evolution Behavior and Systematics030304 developmental biologyBase SequenceHuman genomeGenome HumanSequence Analysis DNA15. Life on landArchaeologyGenetics PopulationpaleogenomicsHaplotypesSpainMolecular Biology and Evolution
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Human tRNA(Sec) associates with HeLa membranes, cell lipid liposomes, and synthetic lipid bilayers.

2012

We have shown previously that simple RNA structures bind pure phospholipid liposomes. However, binding of bona fide cellular RNAs under physiological ionic conditions is shown here for the first time. Human tRNASec contains a hydrophobic anticodon-loop modification: N6-isopentenyladenosine (i6A) adjacent to its anticodon. Using a highly specific double-probe hybridization assay, we show mature human tRNASec specifically retained in HeLa intermediate-density membranes. Further, isolated human tRNASec rebinds to liposomes from isolated HeLa membrane lipids, to a much greater extent than an unmodified tRNASec transcript. To better define this affinity, experiments with pure lipids show that li…

Membrane lipidsLipid BilayersMolecular Sequence DataPhospholipidBiologyArticlechemistry.chemical_compoundMembrane MicrodomainsSphingosineHumansLipid bilayerMolecular BiologyLipid raftLiposomeMembranesSphingosineBase SequenceRNARNA Transfer Amino Acid-SpecificKineticsMembranechemistryBiochemistryLiposomesNucleic Acid ConformationHydrophobic and Hydrophilic InteractionsHeLa CellsRNA (New York, N.Y.)
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Patterns of Expression and Organization of Cytokeratin Intermediate Filaments

1985

Cytokeratins are a large multigene family comprising two polypeptide types, i.e. acidic (type I) and basic (type II) ones, which are distinguished on the basis of immunological, peptide mapping, mRNA hybridization, and primary amino acid sequence data. The acidic (type I) cytokeratins can be subdivided into at least two different subtypes on the basis of their carboxy-terminal sequences. Considerable interspecies conservation of sequences exists, even extending to the 3'-non-coding mRNA regions. Different pairs of type I and II cytokeratins show different resistance to dissociation in urea. Sequence differences of the type I cytokeratins containing functional domains may be an explanation o…

Messenger RNANeurofilamentBase SequenceProtein ConformationChemistryGeneral NeuroscienceIntermediate FilamentsRNAMolecular biologyGeneral Biochemistry Genetics and Molecular BiologyMolecular WeightCytokeratinProtein structureHistory and Philosophy of ScienceTetramerAnimalsHumansKeratinsAmino Acid SequenceRNA MessengerIntermediate filamentPeptide sequenceCytoskeletonAnnals of the New York Academy of Sciences
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Oligonucleotide probes detect splicing variants insituinDrosophilaembryos

1992

We describe a method for the in situ detection of specific splicing variants. The method is based on the use of antisense oligonucleotides designed to span splice junctions labelled with digoxigenin by terminal transferase tailing. We find that the spatial patterns of Ubx splicing variants Ia and IIa are similar in early embryos, but differ in late embryos. Variant IVa is only detected in the CNS (ps6) at stages 16 and 17. We also present evidence indicating that the first splicing event is cotranscriptional.

Messenger RNAanimal structuresBase SequenceTranscription GeneticOligonucleotideMolecular Sequence DataAlternative splicingExonic splicing enhancerOligonucleotides AntisenseBiologyMolecular biologyAlternative Splicingchemistry.chemical_compoundchemistryRNA splicingGeneticsAnimalsDigoxigeninDrosophilaspliceOligonucleotide ProbesDigoxigeninIn Situ HybridizationUltrabithoraxNucleic Acids Research
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Suppression of ischemia-induced fos expression and AP-1 activity by an antisense oligodeoxynucleotide to c-fos mRNA.

1994

The molecular events of brain adaptation to injury that may underlie functional recovery after stroke remain largely undefined. Recent observations of altered gene expression in ischemic brain using animal stroke models have opened new avenues for exploration of the biochemical cascades after stroke [1–11]. These postischemic events include an increase in extracellular excitatory amino acid neurotransmitters such as glutamate. Glutamate receptor–mediated activation of phospholipases and protein kinases results in the alteration of nuclear regulatory processes, including the expression of immediate early genes such as c-fos, junB, and c-jun [5, 12]. The Fos, Jun, and JunB proteins have been …

Messenger RNAbiologyBase SequenceJUNBEffectorOligonucleotideMolecular Sequence DataGene ExpressionOligonucleotides Antisensec-FosMolecular biologyReceptor tyrosine kinaseArticleRatsTranscription Factor AP-1NeurologyTranscription (biology)Ischemic Attack TransientGene expressionbiology.proteinAnimalsNeurology (clinical)RNA MessengerProto-Oncogene Proteins c-fosAnnals of neurology
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Group-specific quantification of methanotrophs in landfill gas-purged laboratory biofilters by tyramide signal amplification-fluorescence in situ hyb…

2008

The aim of this study was to quantitatively analyse methanotrophs in two laboratory landfill biofilters at different biofilter depths and at temperatures which mimicked the boreal climatic conditions. Both biofilters were dominated by type I methanotrophs. The biofilter depth profiles showed that type I methanotrophs occurred in the upper layer, where relatively high O(2) and low CH(4) concentrations were present, whereas type II methanotrophs were mostly distributed in the zone with high CH(4) and low O(2) concentrations. The number of type I methanotrophic cells declined when the temperature was raised from 15 degrees C to 23 degrees C, but increased when lowered to 5 degrees C. A slight …

MethanobacteriaceaeEnvironmental EngineeringType I methanotrophsBioengineeringmedicineWaste Management and DisposalIn Situ Hybridization FluorescenceDNA PrimersType II methanotrophsmedicine.diagnostic_testBase SequenceRenewable Energy Sustainability and the EnvironmentChemistryEnvironmental engineeringGeneral MedicineAmidesRefuse DisposalLandfill gasEnvironmental chemistrySoil waterAnaerobic oxidation of methaneBiofilterGasesOligonucleotide ProbesSignal amplificationFiltrationFluorescence in situ hybridizationBioresource technology
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