Search results for "Bay"

showing 10 items of 1187 documents

Phylogenetic analyses of endoparasitic Acanthocephala based on mitochondrial genomes suggest secondary loss of sensory organs

2012

The metazoan taxon Syndermata (Monogononta, Bdelloidea, Seisonidea, Acanthocephala) comprises species with vastly different lifestyles. The focus of this study is on the phylogeny within the syndermatan subtaxon Acanthocephala (thorny-headed worms, obligate endoparasites). In order to investigate the controversially discussed phylogenetic relationships of acanthocephalan subtaxa we have sequenced the mitochondrial (mt) genomes of Echinorhynchus truttae (Palaeacanthocephala), Paratenuisentis ambiguus (Eoacanthocephala), Macracanthorhynchus hirudinaceus (Archiacanthocephala), and Philodina citrina (Bdelloidea). In doing so, we present the largest molecular phylogenetic dataset so far for this…

Likelihood FunctionsbiologySense OrgansPalaeacanthocephalaZoologyBayes TheoremSequence Analysis DNAArchiacanthocephalabiology.organism_classificationBiological EvolutionDNA MitochondrialAcanthocephalaMonophylySister groupPhylogeneticsGene OrderGenome MitochondrialGeneticsAnimalsBdelloideaEoacanthocephalaAcanthocephalaMolecular BiologyPhylogenyEcology Evolution Behavior and SystematicsMolecular Phylogenetics and Evolution
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Molecular phylogeny of the Notostraca

2012

Abstract We used a combined analysis of one nuclear (28S rDNA) and three mitochondrial markers (COI, 12S rDNA, 16S rDNA) to infer the molecular phylogeny of the Notostraca, represented by samples from the six continents that are inhabited by this group of branchiopod crustaceans. Our results confirm the monophyly of both extant notostracan genera Triops and Lepidurus with good support in model based and maximum parsimony analyses. We used branchiopod fossils as a calibration to infer divergence times among notostracan lineages and accounted for rate heterogeneity among lineages by applying relaxed-clock models. Our divergence date estimates indicate an initial diversification into the gener…

Lineage (evolution)Settore BIO/05 - ZoologiaZoologyDNA MitochondrialTriopsMonophylyNotostracaCrustaceaGeneticsAnimalsMolecular BiologyLepidurus apusPhylogenyEcology Evolution Behavior and SystematicsLepidurusCell NucleusLikelihood FunctionsModels GeneticbiologyFossilsBayes TheoremSequence Analysis DNAbiology.organism_classificationBiological EvolutionMaximum parsimonyMolecular phylogeneticsSequence AlignmentTriops Lepidurus Divergence dates Fossil calibration Relaxed molecular clock
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Five Ways in Which Computational Modeling Can Help Advance Cognitive Science

2019

Abstract There is a rich tradition of building computational models in cognitive science, but modeling, theoretical, and experimental research are not as tightly integrated as they could be. In this paper, we show that computational techniques—even simple ones that are straightforward to use—can greatly facilitate designing, implementing, and analyzing experiments, and generally help lift research to a new level. We focus on the domain of artificial grammar learning, and we give five concrete examples in this domain for (a) formalizing and clarifying theories, (b) generating stimuli, (c) visualization, (d) model selection, and (e) exploring the hypothesis space.

Linguistics and LanguageArtificial grammar learningComputer scienceCognitive Neuroscience[SHS.PSY]Humanities and Social Sciences/PsychologyExperimental and Cognitive PsychologyBayesian inferenceArtificial grammar learningArticle050105 experimental psychology03 medical and health sciences0302 clinical medicineArtificial IntelligenceHumans0501 psychology and cognitive sciencesCognitive scienceComputational modelPsycholinguisticsArtificial neural networkLift (data mining)Model selection05 social sciencesComputational modelingModels TheoreticalArtificial language learningFormal grammarsExperimental researchBayesian modelingVisualizationHuman-Computer InteractionCognitive ScienceNeural Networks ComputerForthcoming Topic: Learning Grammatical Structures: Developmental Cross‐species and Computational Approaches030217 neurology & neurosurgeryNeural networksTopics in Cognitive Science
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Genome wide linkage disequilibrium and genetic structure in Sicilian dairy sheep breeds

2014

Background The recent availability of sheep genome-wide SNP panels allows providing background information concerning genome structure in domestic animals. The aim of this work was to investigate the patterns of linkage disequilibrium (LD), the genetic diversity and population structure in Valle del Belice, Comisana, and Pinzirita dairy sheep breeds using the Illumina Ovine SNP50K Genotyping array. Results Average r2 between adjacent SNPs across all chromosomes was 0.155 ± 0.204 for Valle del Belice, 0.156 ± 0.208 for Comisana, and 0.128 ± 0.188 for Pinzirita breeds, and some variations in LD value across chromosomes were observed, in particular for Valle del Belice and Comisana breeds. Ave…

Linkage disequilibriumSicilian sheep breedsPopulationSingle-nucleotide polymorphismBiologyBreedingPolymorphism Single NucleotideLinkage DisequilibriumSettore AGR/17 - Zootecnica Generale E Miglioramento GeneticoGenome structureOvineSNP50K BeadChip Sicilian sheep breeds Linkage Disequilibrium genome structureGeneticsAnimalsGenetics(clinical)educationSicilyGenetics (clinical)PhylogenySheep DomesticGenetic associationGeneticsGenetic diversityeducation.field_of_studyPrincipal Component AnalysisModels GeneticOvineSNP50K BeadChipBayes TheoremBreedGenetic structureInbreedingGenome-Wide Association StudyResearch Article
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Mesocarnivore community structuring in the presence of Africa's apex predator

2021

This work was supported by the Peace Parks Foundation; G.C.S. was funded by a doctoral grant from Fundacão para a Ciência e a Tecnologia (FCT: PD/BD/114037/2015); L.H.S. was supported by the National Research Foundation, South Africa (UID: 107099 and 115040) and by the African Institute for Conservation Ecology. Apex predator reintroductions have proliferated across southern Africa, yet their ecological effects and proposed umbrella benefits of associated management lack empirical evaluations. Despite a rich theory on top-down ecosystem regulation via mesopredator suppression, a knowledge gap exists relating to the influence of lions (Panthera leo) over Africa's diverse mesocarnivore (less …

Lions0106 biological sciencesHierarchical Bayesian modelshierarchical Bayesian modelsOccupancyQH301 BiologyCarnivoraPanthera leo010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular Biologymesopredator releaseQH301Mesopredator release hypothesisbiology.animalCamera-trapAnimalsHumansUmbrella speciesCarnivoreEcosystemcamera-trapGeneral Environmental ScienceApex predatoroccupancylionEcologyGeographyGeneral Immunology and MicrobiologybiologyEcology010604 marine biology & hydrobiologyDASGeneral MedicineOccupancyMesopredator releaseGeographyLionAfricaSpecies richnessPantheraMesocarnivoreGeneral Agricultural and Biological Sciences
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Chronic high risk of intimate partner violence against women in disadvantaged neighborhoods: An eight-year space-time analysis

2020

Abstract We conducted a small-area ecological longitudinal study to analyze neighborhood contextual influences on the spatio-temporal variations in intimate partner violence against women (IPVAW) risk in a southern European city over an eight-year period. We used geocoded data of IPVAW cases with associated protection orders (n = 5867) in the city of Valencia, Spain (2011–2018). The city's 552 census block groups were used as the neighborhood units. Neighborhood-level covariates were: income, education, immigrant concentration, residential instability, alcohol outlet density, and criminality. We used a Bayesian autoregressive approach to spatio-temporal disease mapping. Neighborhoods with l…

Longitudinal studyEpidemiologymedia_common.quotation_subjectImmigrationSpecific riskIntimate Partner ViolenceNeighborhood DisadvantageVulnerable Populations01 natural sciences03 medical and health sciences0302 clinical medicineResidence CharacteristicsHumansMedicineLongitudinal Studies030212 general & internal medicineCities0101 mathematicsmedia_commonbusiness.industry010102 general mathematicsPublic Health Environmental and Occupational HealthBayes TheoremDisadvantagedSpainRelative riskDomestic violenceFemaleAlcohol outletbusinessDemographyPreventive Medicine
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Mapping geographical inequalities in childhood diarrhoeal morbidity and mortality in low-income and middle-income countries, 2000-17: analysis for th…

2020

Background: Across low-income and middle-income countries (LMICs), one in ten deaths in children younger than 5 years is attributable to diarrhoea. The substantial between-country variation in both diarrhoea incidence and mortality is attributable to interventions that protect children, prevent infection, and treat disease. Identifying subnational regions with the highest burden and mapping associated risk factors can aid in reducing preventable childhood diarrhoea. Methods: We used Bayesian model-based geostatistics and a geolocated dataset comprising 15 072 746 children younger than 5 years from 466 surveys in 94 LMICs, in combination with findings of the Global Burden of Diseases, Injuri…

Low income countriesmedicine.medical_treatment030204 cardiovascular system & hematologyGlobal HealthTHERAPYGlobal Burden of Disease0302 clinical medicinePrevalenceGlobal healthMedicineWATER030212 general & internal medicineChildren11 Medical and Health SciencesIncidenceMortality rateIncidence (epidemiology)1. No povertyGeneral Medicine3142 Public health care science environmental and occupational healthDiarrhoea3. Good healthChild PreschoolMiddle income countriesA990 Medicine and Dentistry not elsewhere classifiedTERRITORIESLife Sciences & BiomedicineInfantsDiarrheaAFRICAmedicine.medical_specialtyChildhood deathsRJsanitationDeveloping countryChildhood diarrhoeal morbidityITC-HYBRID03 medical and health sciencesMedicine General & InternalGeneral & Internal MedicineEnvironmental healthSYSTEMATIC ANALYSISLife ScienceHumansHealthcare DisparitiesOral rehydration therapyRisk factorhand washingDeveloping CountriesDisease burdenGlobal NutritionWereldvoedingScience & TechnologySEX-SPECIFIC MORTALITYbusiness.industryCHOLERAPublic healthBayes Theoremdiarrheal diseaseLocal Burden of Disease Diarrhoea CollaboratorsITC-ISI-JOURNAL-ARTICLENAHuman medicineDiarreabusiness
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Statistical models and inference for spatial point patterns with intensity-dependent marks

2009

MCMCGaussian excursion setbayesilainen menetelmätilastomenetelmätsademetsätBitterlich samplinglog Gaussian Cox processpine samplingsdensity-dependenceMonte Carlo -menetelmätmark-dependent thinningalgoritmitmarked point processrandom set marked Cox processtropical rainforestBayesian modelling
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3,5-Diaizvietotu-4-fenil-2-pirolidonu un to strukturālo analogu sintēze

2017

5-Alkil-4-fenil-3-metilēn-2-pirolidonu un to strukturālo analogu sintēze. Baškevičs V., Darba vadītājs: Dr. ķīm. Maksims Vorona. Maģistra darbs. 102 lappuses, 18 attēli, 30 pielikumi, 32 literatūras avoti. Latviešu valodā. Uz Morita-Baylis-Hillman reakcijas produktu bāzes realizēta to acilēšana un nitroalkānu pievienošanas starpproduktam. Iegūtie starpprodukti tika pakļauti reducēšanas reakcijai un iekšmolekulārai ciklizācijai ar eksometilēn grupu saturošo 2-pirolidonu veidošanu. Šim nolūkam bija izmēģinātas vairākas literatūrā eksistējošas 5-alkil-4-fenil-3-metilēn-2-pirolidonu iegūšanas metodes, no kuriem tika izvēlēta reducēšanas reakcija ar dzelzs pulvera palīdzību ledus etiķskābē. Iegū…

MORITA-BAYLIS-HILLMAN REAKCIJA2-(5-ALKYL-3-METHYLENE-4-PHENYL-2-OXOPYRROLIDIN-1-YL)ACETAMIDES2-(5-ALKIL-4-FENIL-3-METILĒN-2-OKSOPIROLIDIN-1-IL)ACETAMIDI5-ALKIL-4-FENIL-3-METILĒN-2-PIROLIDONIĶīmija5-ALKYL-3-METHYLENE-4-PHENYL-2-PIRROLIDONES
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Spain in the euro: a general equilibrium analysis

2010

Bayesian dynamic stochastic general equilibrium (DSGE) models combine microeconomic behavioural foundations with a full-system Bayesian likelihood estimation approach using key macro-economic variables. Because of the usefulness of this class ofmodels for addressing questions regarding the impact and consequences of alternative monetary policies they are nowadays widely used for forecasting and policy analysis at central banks and other institutions. In this paper we provide a brief description of the two main aggregate euro area models at the ECB. Both models share a common core but their detailed specification differs reflecting their specific focus and use. The New Area Wide Model (NAWM)…

MacroeconomicsDynamisches GleichgewichtInflationGeneral equilibrium theorycentral banksmedia_common.quotation_subjectmonetary policyWageMonetary economicsDSGE modelsE50Rest (finance)ddc:330EconomicsDynamic stochastic general equilibriumProductivityC5DSGE model monetary union growth and inflation differentials Bayesian inferenceE32Spanienmedia_commonWirtschaftswachstumEurojel:C51jel:C11Inflationjel:E17EurozoneEuropean monetary unionGeneral Economics Econometrics and FinanceB4Public finance
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