Search results for "Bioassays"

showing 10 items of 55 documents

Accumulation of trace metals in sediments in a Mediterranean Lagoon: Usefulness of metal sediment fractionation and elutriate toxicity assessment.

2015

International audience; The authors investigated sediment quality in Bizerte Lagoon (Tunisia) focusing on geochemical characteristics, metal sediment fractionation and elutriate toxicity assessment. Nickel, Cu, Zn, Pb, Cr and Cd partitioning in sediments was studied; accumulation and bioavailability were elucidated using enrichment factors, sequential extractions, redox potential, acid volatile sulfide and biotest procedures in toxicity evaluation. Results revealed an accumulation for Pb and Zn, reaching 99 and 460 mg kg−1 respectively. In addition, the acid volatile sulfide values were high in both eastern and western lagoon areas, thus affecting metal availability. Mean enrichment factor …

Geologic SedimentsSulfideHealth Toxicology and MutagenesisFractionationGeologic SedimentsChemical FractionationSulfidesToxicologyBioassaysMetal[ SDE ] Environmental SciencesTrace metalsNickelMetals HeavyMediterranean Sea14. Life underwaterParticle Sizechemistry.chemical_classificationToxicitySedimentGeneral MedicinePollution effectsPollution6. Clean waterBioavailabilitychemistryMetalsEnvironmental chemistryvisual_artCoastal lagoons[SDE]Environmental SciencesToxicityvisual_art.visual_art_mediumEnrichment factorGeologyEnvironmental MonitoringEnvironmental pollution (Barking, Essex : 1987)
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Optogenetically blocking sharp wave ripple events in sleep does not interfere with the formation of stable spatial representation in the CA1 area of …

2016

During hippocampal sharp wave/ripple (SWR) events, previously occurring, sensory inputdriven neuronal firing patterns are replayed. Such replay is thought to be important for plasticity-related processes and consolidation of memory traces. It has previously been shown that the electrical stimulation-induced disruption of SWR events interferes with learning in rodents in different experimental paradigms. On the other hand, the cognitive map theory posits that the plastic changes of the firing of hippocampal place cells constitute the electrophysiological counterpart of the spatial learning, observable at the behavioral level. Therefore, we tested whether intact SWR events occurring during th…

LightPhysiologylcsh:MedicineHippocampusTetrodesMiceAnimal Cells571 PhysiologyMedicine and Health Scienceslcsh:ScienceNeuronsLight PulsesBrain MappingNeuronal PlasticityPyramidal CellsPhysicsElectromagnetic RadiationBrainLaboratory EquipmentSignal Filteringsharp wave ripple eventesBioassays and Physiological AnalysisOptical EquipmentVacuum ApparatusPhysical SciencesEngineering and TechnologyFemaleCellular TypesAnatomyResearch ArticleGanglion CellsArchaeal ProteinsSpatial LearningEquipmentResearch and Analysis Methodsuni (lepotila)AnimalshippokampusCA1 Region HippocampalLaserslcsh:RCorrectionBiology and Life SciencesNeurophysiological AnalysisCell BiologyBrain WavesMice Inbred C57BLOptogeneticsCellular NeuroscienceSignal ProcessingExploratory Behavior570 Life sciences; biologylcsh:QPhysiological ProcessesSleepNeuroscience
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Neuronal activity triggers uptake of hematopoietic extracellular vesicles in vivo

2019

Communication with the hematopoietic system is a vital component of regulating brain function in health and disease. Traditionally, the major routes considered for this neuroimmune communication are by individual molecules such as cytokines carried by blood, by neural transmission, or, in more severe pathologies, by the entry of peripheral immune cells into the brain. In addition, functional mRNA from peripheral blood can be directly transferred to neurons via extracellular vesicles (EVs), but the parameters that determine their uptake are unknown. Using varied animal models that stimulate neuronal activity by peripheral inflammation, optogenetics, and selective proteasome inhibition of dop…

LipopolysaccharidesMaleGene ExpressionStimulationHippocampusBiochemistryStereotaxic Techniques0302 clinical medicineShort ReportsAnimal CellsMedicine and Health SciencesPremovement neuronal activityBiology (General)Routes of AdministrationNeurons0303 health sciencesBrain MappingKainic AcidBrainAnimal ModelsPeripheralCell biologyHaematopoiesisBioassays and Physiological AnalysisExperimental Organism SystemsHippocampus ; Yellow flourescent protein ; Intravenous injections ; Marker genes ; Gene expression ; Neurons ; Microglial cells ; OptogeneticsFemaleCellular TypesSignal TransductionProteasome Endopeptidase ComplexQH301-705.5Yellow Fluorescent ProteinMice TransgenicGlial CellsMouse ModelsStimulus (physiology)BiologyResearch and Analysis Methods03 medical and health sciencesExtracellular VesiclesImmune systemModel OrganismsIn vivoIntravenous InjectionsGeneticsAnimalsddc:610Molecular Biology TechniquesMolecular BiologyMicroglial Cells030304 developmental biologyInflammationPharmacologyMessenger RNABlood CellsUbiquitinDopaminergic NeuronsBiology and Life SciencesProteinsMarker GenesCell BiologyNeurophysiological AnalysisOptogeneticsLuminescent ProteinsCellular NeuroscienceAnimal Studies030217 neurology & neurosurgeryNeuroscience
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Removing Batch Effects from Longitudinal Gene Expression - Quantile Normalization Plus ComBat as Best Approach for Microarray Transcriptome Data

2016

International audience; Technical variation plays an important role in microarray-based gene expression studies, and batch effects explain a large proportion of this noise. It is therefore mandatory to eliminate technical variation while maintaining biological variability. Several strategies have been proposed for the removal of batch effects, although they have not been evaluated in large-scale longitudinal gene expression data. In this study, we aimed at identifying a suitable method for batch effect removal in a large study of microarray-based longitudinal gene expression. Monocytic gene expression was measured in 1092 participants of the Gutenberg Health Study at baseline and 5-year fol…

Male0301 basic medicineMolecular biologyMicroarrayslcsh:MedicineGene ExpressionPolynomialsMonocytesMathematical and Statistical Techniques0302 clinical medicineLongitudinal StudiesProspective Studieslcsh:ScienceOligonucleotide Array Sequence AnalysisGeneticsPrincipal Component Analysis[SDV.MHEP] Life Sciences [q-bio]/Human health and pathologyMultidisciplinaryGenomicsReplicateMiddle AgedRegressionRNA isolationBioassays and Physiological Analysis030220 oncology & carcinogenesisPhysical SciencesPrincipal component analysisFemaleRNA hybridizationDNA microarrayTranscriptome AnalysisStatistics (Mathematics)Research ArticleAdultComputational biologyBiologyBiomolecular isolationGeneralized linear mixed model03 medical and health sciencesDeming regressionExtraction techniquesGeneticsHumansStatistical MethodsAgedQuantile normalizationMolecular probe techniquesGene Expression Profilinglcsh:RBiology and Life SciencesComputational BiologyGenome AnalysisProbe hybridizationRNA extractionResearch and analysis methodsGene expression profilingMolecular biology techniquesAlgebra030104 developmental biologyNonlinear DynamicsMultivariate Analysislcsh:QMathematics[SDV.MHEP]Life Sciences [q-bio]/Human health and pathology
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Association of Common Polymorphisms in the Nicotinic Acetylcholine Receptor Alpha4 Subunit Gene with an Electrophysiological Endophenotype in a Large…

2016

PLoS one 11(4), e0152984 (2016). doi:10.1371/journal.pone.0152984

Male0301 basic medicineNicotinic Acetylcholine ReceptorsPhysiologyEvent-Related Potentialslcsh:MedicineReceptors NicotinicElectroencephalography600 Technik Medizin angewandte Wissenschaften::610 Medizin und GesundheitBiochemistryExonCognitionMathematical and Statistical Techniques0302 clinical medicineMedizinische FakultätGermanyMedicine and Health Scienceslcsh:ScienceCerebral CortexClinical NeurophysiologyGeneticsBrain MappingN100education.field_of_studyMultidisciplinarymedicine.diagnostic_testSmokingBrainElectroencephalographyTobacco Use DisorderTemporal LobeFrontal LobeElectrophysiologyNicotinic acetylcholine receptorBioassays and Physiological AnalysisBrain ElectrophysiologyPhysical SciencesRegression AnalysisFemaleAnatomyFunction and Dysfunction of the Nervous SystemStatistics (Mathematics)Research ArticleSignal TransductionAdultTransmembrane ReceptorsImaging TechniquesEndophenotypesCognitive NeurosciencePopulation610NeurophysiologyNeuroimagingSingle-nucleotide polymorphism-Linear Regression AnalysisBiologyResearch and Analysis MethodsPolymorphism Single Nucleotide03 medical and health sciencesDiagnostic MedicineEvent-related potentialReaction TimemedicineHumansddc:610Statistical MethodseducationElectrophysiological Techniqueslcsh:RBiology and Life SciencesProteinsCell BiologyElectrophysiological Phenomena030104 developmental biologyAcetylcholine ReceptorsEndophenotypeCognitive Sciencelcsh:QMathematics030217 neurology & neurosurgeryNeuroscience
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Troponin I Assay for Identification of a Significant Coronary Stenosis in Patients with Suspected Acute Myocardial Infarction and Wide QRS Complex

2016

Background Common ECG criteria such as ST-segment changes are of limited value in patients with suspected acute myocardial infarction (AMI) and bundle branch block or wide QRS complex. A large proportion of these patients do not suffer from an AMI, whereas those with ST-elevation myocardial infarction (STEMI) equivalent AMI benefit from an aggressive treatment. Aim of the present study was to evaluate the diagnostic information of cardiac troponin I (cTnI) in hemodynamically stable patients with wide QRS complex and suspected AMI. Methods In 417 out of 1818 patients presenting consecutively between 01/2007 and 12/2008 in a prospective multicenter observational study with suspected AMI a pro…

MaleCardiovascular ProceduresMyocardial Infarctionlcsh:MedicineCoronary Artery Disease030204 cardiovascular system & hematologyPathology and Laboratory MedicineBiochemistryVascular MedicineCoronary artery diseaseElectrocardiographyPatient Admission0302 clinical medicineTroponin IMedicine and Health SciencesMedicine030212 general & internal medicineMyocardial infarctionlcsh:ScienceStenosisMultidisciplinarymedicine.diagnostic_testbiologyMiddle AgedTroponinBioassays and Physiological Analysiscardiovascular systemCardiologyFemaleAlgorithmsResearch Articlemedicine.medical_specialtyCardiologySurgical and Invasive Medical ProceduresResearch and Analysis MethodsSensitivity and Specificity03 medical and health sciencesSigns and SymptomsDiagnostic MedicineInternal medicineHumansddc:610cardiovascular diseasesAgedCoronary RevascularizationBundle branch blockReceiver operating characteristicbusiness.industryRevascularizationElectrophysiological TechniquesAngioplastyTroponin Ilcsh:RCoronary StenosisBiology and Life SciencesProteinsmedicine.diseaseTroponinCytoskeletal Proteinsbiology.proteinMyocardial infarction complicationslcsh:QCardiac ElectrophysiologybusinessCoronary AngioplastyElectrocardiographyBiomarkersPLOS ONE
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Naturalistic music and dance: Cortical phase synchrony in musicians and dancers

2018

Expertise in music has been investigated for decades and the results have been applied not only in composition, performance and music education, but also in understanding brain plasticity in a larger context. Several studies have revealed a strong connection between auditory and motor processes and listening to and performing music, and music imagination. Recently, as a logical next step in music and movement, the cognitive and affective neuro-sciences have been directed towards expertise in dance. To understand the versatile and overlapping processes during artistic stimuli, such as music and dance, it is necessary to study them with continuous naturalistic stimuli. Thus, we used long exce…

MaleCentral Nervous Systemkognitiomusic perceptionDancePhysiologytanssiEmotionsSocial Scienceslcsh:Medicinemusculoskeletal systemContemporary danceNervous Systemtuki- ja liikuntaelimetBAND0302 clinical medicinehavainnointiMedicine and Health SciencesPsychologymusic cognitionBRAINlcsh:SciencekiihtyvyysCerebral CortexClinical NeurophysiologyBrain MappingMultidisciplinaryMusic psychologyPhysics05 social sciencesClassical MechanicsSENSORIMOTOR SYNCHRONIZATIONMusic and movementFUNCTIONAL-ROLEElectrophysiologySilenceBioassays and Physiological AnalysisBrain ElectrophysiologyPhysical Sciencesta6131FemaleSensory PerceptionAnatomyPsychologyelectroencephalographyResearch ArticleCognitive psychologyAdult515 PsychologyImaging TechniqueskeskushermostomusiikkiNeurophysiologybioakustiikkaMIRROR-NEURON SYSTEMNeuroimagingContext (language use)Research and Analysis Methodsta3112050105 experimental psychologybioacousticsYoung Adult03 medical and health sciencesTHETA-SYNCHRONIZATIONtunteetOSCILLATIONSHumans0501 psychology and cognitive sciencesActive listeningDancingPERCEPTIONDESYNCHRONIZATIONElectrophysiological Techniqueslcsh:RCognitive PsychologyBiology and Life SciencesAcousticsaccelerationliikeMusic educationBrain WavesElectrophysiological PhenomenaALPHAaivokuoriAcoustic StimulationCognitive Science516 Educational scienceslcsh:QClinical MedicineMusic030217 neurology & neurosurgeryNeurosciencePLOS ONE
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5th generation vs 4th generation troponin T in predicting major adverse cardiovascular events and all-cause mortality in patients hospitalized for no…

2020

Objective The frequency and implications of an elevated cardiac troponin (4th or 5th generation TnT) in patients outside of the emergency department or presenting with non-cardiac conditions is unclear. Methods Consecutive patients aged 18 years or older admitted for a primary non-cardiac condition who had the 4th generation TnT drawn had the 5th generation TnT run on the residual blood sample. Primary and secondary outcomes were all-cause mortality (ACM) and major adverse cardiovascular events (MACE) respectively at 1 year. Results 918 patients were included (mean age 59.8 years, 55% male) in the cohort. 69% had elevated 5th generation TnT while 46% had elevated 4th generation TnT. 5th ge…

MaleCritical Care and Emergency MedicineEpidemiologyMyocardial InfarctionCardiovascular Medicine030204 cardiovascular system & hematologyBiochemistryElectrocardiographyMedical Conditions0302 clinical medicineMedicine and Health Sciences030212 general & internal medicineMyocardial infarctionImmunoassayMultidisciplinarymedicine.diagnostic_testbiologyTroponin TQRMiddle Agedmusculoskeletal systemTroponinHospitalizationBioassays and Physiological AnalysisCardiovascular DiseasesCohortCardiologyMedicineFemaleResearch ArticleCohort studymedicine.medical_specialtyDeath RatesScienceCardiologyResearch and Analysis Methods03 medical and health sciencesTroponin TPopulation MetricsPredictive Value of TestsInternal medicinemedicineHumansMortalityPopulation Biologybusiness.industryElectrophysiological TechniquesBiology and Life SciencesProteinsEmergency departmentCardiovascular Disease Riskmedicine.diseaseTroponinCytoskeletal ProteinsMedical Risk Factorsbiology.proteinCardiac ElectrophysiologybusinessElectrocardiographyMacePLoS ONE
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Semantic anomaly detection in school-aged children during natural sentence reading : A study of fixation-related brain potentials

2018

In this study, we investigated the effects of context-related semantic anomalies on the fixation-related brain potentials of 12–13-year-old Finnish children in grade 6 during sentence reading. The detection of such anomalies is typically reflected in the N400 event-related potential. We also examined whether the representation invoked by the sentence context extends to the orthographic representation level by replacing the final words of the sentence with an anomalous word neighbour of a plausible word. The eye-movement results show that the anomalous word neighbours of plausible words cause similar first-fixation and gaze duration reactions, as do other anomalous words. Similarly, we obser…

MaleEye MovementsPhysiologyVisual SystemSensory Physiologyschool-aged childrenSocial SciencesElectroencephalographylukeminen0302 clinical medicineParietal LobeMedicine and Health SciencesPsychologyAttentionChildEvoked Potentialsta515LanguageClinical NeurophysiologyP600Brain MappingMultidisciplinarymedicine.diagnostic_testQ05 social sciencesRBrainElectroencephalographySensory SystemsSemanticsElectrophysiologyBioassays and Physiological AnalysisBrain ElectrophysiologyPhysical SciencesMedicineAnomaly detectionFemaleAnatomyPsychologySentenceCognitive psychologyResearch ArticleAdolescentImaging TechniquesPermutationScienceNeurophysiologyNeuroimagingResearch and Analysis Methods050105 experimental psychology03 medical and health scienceskouluikäisetreadingmedicineReaction TimeHumanssemantic anomaly detection0501 psychology and cognitive sciencesScalpDiscrete MathematicsElectrophysiological TechniquesCognitive PsychologyBiology and Life SciencesLinguisticsFixation (psychology)Independent component analysisGazeN400Lexical SemanticsCombinatoricsCognitive ScienceConceptual SemanticsClinical MedicineHeadanomaliat030217 neurology & neurosurgeryMathematicsNeurosciencePLoS ONE
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Estimated stroke risk, yield, and number needed to screen for atrial fibrillation detected through single time screening: a multicountry patient-leve…

2019

Background The precise age distribution and calculated stroke risk of screen-detected atrial fibrillation (AF) is not known. Therefore, it is not possible to determine the number needed to screen (NNS) to identify one treatable new AF case (NNS-Rx) (i.e., Class-1 oral anticoagulation [OAC] treatment recommendation) in each age stratum. If the NNS-Rx is known for each age stratum, precise cost-effectiveness and sensitivity simulations can be performed based on the age distribution of the population/region to be screened. Such calculations are required by national authorities and organisations responsible for health system budgets to determine the best age cutoffs for screening programs and d…

MaleHealth ScreeningEconomicsSocial Sciences030204 cardiovascular system & hematologyVascular MedicineScreening programmeElectrocardiography0302 clinical medicineRisk FactorsHealth careAtrial FibrillationMedicine and Health SciencesMass ScreeningPublic and Occupational Health030212 general & internal medicinemedia_commonAged 80 and overRAge FactorsGeneral MedicineMiddle AgedUniversity hospitalPrognosis3. Good healthStrokeBioassays and Physiological AnalysisNeurologyHealthMedicineFemaleTraining programArrhythmiaResearch ArticleAdultCerebrovascular DiseasesCost-Effectiveness AnalysisCardiologyLibrary scienceResearch and Analysis MethodsRisk AssessmentStroke risk03 medical and health sciencesYoung AdultAge DistributionSex FactorsPopulation MetricsPredictive Value of TestsPolitical sciencemedia_common.cataloged_instanceHumansEarly careerEuropean unionIschemic StrokeAgedHealth Care PolicyPopulation Biologybusiness.industryElectrophysiological TechniquesBiology and Life SciencesNumber needed to screenEconomic AnalysisHealth CareAge GroupsPeople and PlaceseHealthPopulation GroupingsCardiac ElectrophysiologybusinessScreening Guidelines
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