Search results for "Biochemistry"

showing 10 items of 20172 documents

Quantitative proteomics reveals a dynamic association of proteins to detergent-resistant membranes upon elicitor signaling in tobacco.

2009

International audience; A large body of evidence from the past decade supports the existence, in membrane from animal and yeast cells, of functional microdomains playing important roles in protein sorting, signal transduction, or infection by pathogens. In plants, as previously observed for animal microdomains, detergent-resistant fractions, enriched in sphingolipids and sterols, were isolated from plasma membrane. A characterization of their proteic content revealed their enrichment in proteins involved in signaling and response to biotic and abiotic stress and cell trafficking suggesting that these domains were likely to be involved in such physiological processes. In the present study, w…

0106 biological sciencesProteomicsGTPase-activating proteinQuantitative proteomicsDetergentsPlasma protein bindingBiologymedicine.disease_causeProteomics01 natural sciencesBiochemistryMass SpectrometryAnalytical ChemistryCell membraneFungal Proteins03 medical and health sciencesProtein targetingTobaccomedicine[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyMolecular Biology030304 developmental biologyPlant Proteins0303 health sciencesFungal proteinStaining and LabelingResearchAlgal ProteinsCell MembraneCell biologymedicine.anatomical_structureBiochemistryLuminescent MeasurementsSignal transductionPeptidesReactive Oxygen Species010606 plant biology & botanyProtein BindingSignal TransductionMolecularcellular proteomics : MCP
researchProduct

Next-generation biological control

2020

Biological control is widely successful at controlling pests, but effective biocontrol agents are now more difficult to import from countries of origin due to more restrictive international trade laws (the Nagoya Protocol). Coupled with increasing demand, the efficacy of existing and new biocontrol agents needs to be improved with genetic and genomic approaches. Although they have been underutilised in the past, application of genetic and genomic techniques is becoming more feasible from both technological and economic perspectives. We review current methods and provide a framework for using them. First, it is necessary to identify which biocontrol trait to select and in what direction. Nex…

0106 biological sciencesProteomicsH10 Pests of plantsInternationalityComputer science[SDV]Life Sciences [q-bio]Laboratory of VirologySequence assemblybiological controlmicrobiome01 natural sciencesGenome editinggeneticsNagoya ProtocolLaboratory of EntomologyCYTOPLASMIC INCOMPATIBILITY2. Zero hunger0303 health sciencesQUANTITATIVE TRAIT LOCICommercefood and beveragesCONTROL AGENTSPE&RCBiosystematiekNASONIA-VITRIPENNISGUT CONTENT-ANALYSIS[SDE]Environmental SciencesTraitinsect breedingAXYRIDIS COLEOPTERA-COCCINELLIDAEOriginal ArticleLaboratory of GeneticsLIFE-HISTORY TRAITSGeneral Agricultural and Biological SciencesGenomicsContext (language use)Computational biology[SDV.BID]Life Sciences [q-bio]/Biodiversityartificial selectionQuantitative trait locusAnimal Breeding and GenomicsLaboratorium voor Erfelijkheidsleer010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular BiologyLaboratorium voor Virologiemodelling03 medical and health sciencesgenomics[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyFokkerij en GenomicaPARASITOID WASPSelection (genetic algorithm)modelling.030304 developmental biologySEX DETERMINATIONOriginal ArticlesLaboratorium voor EntomologieWIASgenome assemblyBiosystematicsEPSartificial selection biological control genetics genome assembly genomics insect breeding microbiome modellingBiological Reviews
researchProduct

A new ursane-type triterpene oxoglucopyranoside from Crossopteryx febrifuga.

2019

Abstract A new saponin, 3-O-β-d-3-oxo-glucopyranosyl-ursa-12,20(30)-diene-27,28-dioic acid (1), was isolated from the methanol extract of stem bark of Crossopteryx febrifuga together with the known 3β-d-glucopyranosyl-ursa-12,20(30)-diene-27,28-dioic acid (2), shanzhiside methyl ester (3), shanzhiside (4), β-sitosterol (5), β-sitosterol-3-O-β-d-glucopyranoside (6), ursa-12,20(30)-diene-27,28-dioic acid (7), hederagenin (8), and oleanolic acid (9). The structures were established by comprehensive interpretation of their spectral data 1D- (1H and 13C), 2D-NMR (1H-1H COSY, HMQC, HMBC), spectroscopic, and electrospray ionisation time-of-flight mass spectrometry analysis. The isolated compounds …

0106 biological sciencesProton Magnetic Resonance SpectroscopySaponinRubiaceaeMicrobial Sensitivity Testsmedicine.disease_cause01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyEnterococcus faecalischemistry.chemical_compoundMinimum inhibitory concentrationTriterpeneGlucosidesmedicineCarbohydrate ConformationCarbon-13 Magnetic Resonance SpectroscopyOleanolic acidchemistry.chemical_classificationChromatographybiologyBacteriaChemistrybiology.organism_classificationTriterpenes0104 chemical sciences010404 medicinal & biomolecular chemistryHederageninStaphylococcus aureusAntibacterial activity010606 plant biology & botanyZeitschrift fur Naturforschung. C, Journal of biosciences
researchProduct

Purine auxotrophy: Possible applications beyond genetic marker

2019

Exploring new drug candidates or drug targets against many illnesses is necessary as "traditional" treatments lose their effectivity. Cancer and sicknesses caused by protozoan parasites are among these diseases. Cell purine metabolism is an important drug target. Theoretically, inhibiting purine metabolism could stop the proliferation of unwanted cells. Purine metabolism is similar across all eukaryotes. However, some medically important organisms or cell lines rely on their host purine metabolism. Protozoans causing malaria, leishmaniasis, or toxoplasmosis are purine auxotrophs. Some cancer forms have also lost the ability to synthesize purines de novo. Budding yeast can serve as an effect…

0106 biological sciencesPurineAuxotrophySaccharomyces cerevisiaeBioengineeringSaccharomyces cerevisiaeBiology01 natural sciencesApplied Microbiology and BiotechnologyBiochemistry03 medical and health scienceschemistry.chemical_compoundDrug DevelopmentNeoplasms010608 biotechnologyGeneticsHumansPurine metabolism030304 developmental biology0303 health sciencesAdenineEukaryotaCell Cycle CheckpointsMetabolismCell cyclebiology.organism_classificationYeastchemistryBiochemistryPurinesCancer cellBiotechnologyYeast
researchProduct

Anti-phytopathogen terpenoid glycosides from the root bark of Chytranthus macrobotrys and Radlkofera calodendron

2020

Abstract Chytranthus macrobotrys and Radlkofera calodendron are two Sapindaceae characterized by a lack of phytochemical data. Both root barks from the two Sapindaceae species were processed by ethanol extraction followed by the isolation of their primary constituents by liquid chromatography. This process yielded four previously undescribed terpenoid glycosides together with eight known analogues. Extracts and isolated compounds from C. macrobotrys and R. calodendron were then screened for antimicrobial activity against fifteen phytopathogens. The biological screening also involved extracts and pure compounds from Blighia unijugata and Blighia welwitschii, two Sapindaceae previously studie…

0106 biological sciencesPyriculariaFomitiporia mediterraneaPlant SciencePhaeomoniella chlamydosporaHorticultureSapindaceaeXylella01 natural sciencesBiochemistryRhizoctoniaRhizoctonia solaniSapindaceaeAscomycotaFusariumFusarium oxysporumBotanyGlycosidesPythiumMolecular BiologyBotrytis cinereabiologyPlant ExtractsTerpenes010405 organic chemistrybiology.plant_disease_causeBasidiomycotaGeneral MedicineSaponinsbiology.organism_classification0104 chemical sciencesPlant BarkBotrytis010606 plant biology & botanyPhytochemistry
researchProduct

Active Wild Food Practices among Culturally Diverse Groups in the 21st Century across Latgale, Latvia

2021

Simple Summary A study in the bordering region of Latvia took place in order to investigate wild plant food uses. In total 72 interviewees reported food uses. The most represented uses of recorded plants were recreational tea; for jam; as snacks and soup; and drink. Interviewees also reported loss of foraging practice due to the habitat change as for example in case of caraway and chamomile. The results indicated that part of the reason for the main use of wild plants were linked to diet diversification. Abstract Local ecological knowledge (LEK), including but not limited to the use of wild food plants, plays a large role in sustainable natural resource management schemes, primarily due to …

0106 biological sciencesQH301-705.5BiodiversityContext (language use)Diversification (marketing strategy)Biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyArticleSettore BIO/01 - Botanica GeneraleforagingCultural diversityBiology (General)Natural resource managementSocioeconomicsnatural resourcesRecreationGeneral Immunology and Microbiologyfood and beverageswild food plantslocal ecological knowledgeNatural resourceLatvia0104 chemical sciencesLocal community010404 medicinal & biomolecular chemistryGeneral Agricultural and Biological SciencesForaging; Latvia; Local ecological knowledge; Natural resources; Wild food plants010606 plant biology & botanyBiology
researchProduct

First data on microflora of loggerhead sea turtle (Caretta caretta) nests from the coastlines of Sicily (Italy)

2020

ABSTRACT Caretta caretta is threatened by many dangers in the Mediterranean basin, but most are human-related. The purposes of this research were: (i) to investigate microflora in samples from six loggerhead sea turtle nests located on the Sicilian coast and (ii) to understand microbial diversity associated with nests, with particular attention to bacteria and fungi involved in failed hatchings. During the 2016 and 2018 summers, 456 eggs and seven dead hatchling from six nests were collected. We performed bacteriological and mycological analyses on 88 egg samples and seven dead hatchlings, allowing us to isolate: Fusarium spp. (80.6%), Aeromonas hydrophila (55.6%), Aspergillus spp. (27.2%) …

0106 biological sciencesQH301-705.5ZygoteScienceMicrofloraZoology010603 evolutionary biology01 natural sciencesLoggerhead sea turtleMediterranean BasinGeneral Biochemistry Genetics and Molecular BiologyNesting Behaviorlaw.invention03 medical and health sciencesMediterranean seaFusariumlawSea turtle eggsMediterranean SeaAnimalsBiology (General)Internal transcribed spacerTurtle (robot)SicilyHatchling030304 developmental biologyCaretta caretta0303 health sciencesbiologyHatchingMicrobiotaQbiology.organism_classificationAeromonas hydrophilaTurtlesCitrobacter freundiiAspergillusThreatened speciesGeneral Agricultural and Biological SciencesResearch ArticleBiology Open
researchProduct

Arabidopsis SGS2 and SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance.

2000

AbstractPosttranscriptional gene silencing (PTGS) in plants results from the degradation of mRNAs and shows phenomenological similarities with quelling in fungi and RNAi in animals. Here, we report the isolation of sgs2 and sgs3 Arabidopsis mutants impaired in PTGS. We establish a mechanistic link between PTGS, quelling, and RNAi since the Arabidopsis SGS2 protein is similar to an RNA-dependent RNA polymerase like N. crassa QDE-1, controlling quelling, and C. elegans EGO-1, controlling RNAi. In contrast, SGS3 shows no significant similarity with any known or putative protein, thus defining a specific step of PTGS in plants. Both sgs2 and sgs3 mutants show enhanced susceptibility to virus, d…

0106 biological sciencesRNA-induced transcriptional silencingDNA PlantRNA-induced silencing complexTrans-acting siRNAMolecular Sequence DataPotyvirusArabidopsisRNA-dependent RNA polymerase[SDV.BC]Life Sciences [q-bio]/Cellular BiologyGenes Plant01 natural sciencesCucumovirusGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesSolanum lycopersicumRNA interferenceArabidopsisGene expressionGene silencingAmino Acid SequenceGene SilencingCloning MolecularRNA Processing Post-Transcriptional[SDV.BC] Life Sciences [q-bio]/Cellular BiologyComputingMilieux_MISCELLANEOUS030304 developmental biologyPlant DiseasesPlant ProteinsGenetics0303 health sciencesbiologyBase SequenceBiochemistry Genetics and Molecular Biology(all)Arabidopsis ProteinsfungiTobamovirusChromosome MappingGENETIQUEbiology.organism_classificationRNA-Dependent RNA PolymeraseMutagenesis010606 plant biology & botanyCell
researchProduct

Gene flow relates to evolutionary divergence among populations at the range margin

2020

Background Morphological differentiation between populations resulting from local adaptations to environmental conditions is likely to be more pronounced in populations with increasing genetic isolation. In a previous study a positive clinal variation in body size was observed in isolated Roesel’s bush-cricket, Metrioptera roeselii, populations, but were absent from populations within a continuous distribution at the same latitudinal range. This observational study inferred that there was a phenotypic effect of gene flow on climate-induced selection in this species. Methods To disentangle genetic versus environmental drivers of population differences in morphology, we measured the size of …

0106 biological sciencesRange (biology)Climatelcsh:MedicineBody sizeBiology010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyGene flowEvolutionsbiologi03 medical and health sciencesAdaptive divergenceMargin (machine learning)GeneticsGenetikGenetic isolation030304 developmental biologyEvolutionary Biology0303 health sciencesEcologyMorphological differentiationGeneral Neurosciencelcsh:RVDP::Matematikk og Naturvitenskap: 400Body sizeGeneral MedicineEvolutionary StudiesEvolutionary biologyOrthopteraEvolutionary divergenceGeneral Agricultural and Biological SciencesEntomologyZoologyGenetic isolatePeerJ
researchProduct

Using the GENESYS model quantifying the effect of cropping systems on gene escape from GM rape varieties to evaluate and design cropping systems.

2004

Gene flow in rapeseed is a process taking place both in space and over the years and cannot be studied exclusively by field trials. Consequently, the GENESYS model was developed to quantify the effects of cropping systems on transgene escape from rapeseed crops to rapeseed volunteers in neighbour plots and in the subsequent crops. In the present work, this model was used to evaluate the risk of rape harvest contamination by extraneous genes in various farming systems in case of co-existing GM, conventional and organic crops. When 50 % of the rape varieties in the region were transgenic, the rate of GM seeds in non-GM crop harvests on farms with large fields was lower than the 0.9 % purity t…

0106 biological sciencesRapeseedFLUX DE GENElcsh:TP670-699Biologycropping system01 natural sciencesBiochemistryCrop[SDV.IDA]Life Sciences [q-bio]/Food engineeringAGRONOMIECropping systemCover cropCOLZAComputingMilieux_MISCELLANEOUS2. Zero hungermodelbusiness.industryoilseed rape GM cropscoexistencefood and beveragesSowing04 agricultural and veterinary sciences[SDV.IDA] Life Sciences [q-bio]/Food engineeringBiotechnologyAgronomyAgriculture040103 agronomy & agricultureOrganic farming0401 agriculture forestry and fisherieslcsh:Oils fats and waxesgene flowbusinessCropping010606 plant biology & botanyFood Science
researchProduct