Search results for "Biological system"
showing 10 items of 319 documents
Novel Resistance Measurement Method: Analysis of Accuracy and Thermal Dependence with Applications in Fiber Materials
2016
Material resistance is important since different physicochemical properties can be extracted from it. This work describes a novel resistance measurement method valid for a wide range of resistance values up to 100 GΩ at a low powered, small sized, digitally controlled and wireless communicated device. The analog and digital circuits of the design are described, analysing the main error sources affecting the accuracy. Accuracy and extended uncertainty are obtained for a pattern decade box, showing a maximum of 1 % accuracy for temperatures below 30 ∘ C in the range from 1 MΩ to 100 GΩ. Thermal analysis showed stability up to 50 ∘ C for values below 10 GΩ and systematic deviations for higher …
Use of an artificial model of monitoring data to aid interpretation of principal component analysis
2000
Abstract An artificial data matrix of element concentrations at sampling locations was created which included six simulated gradients of correlated variables (Ca+Mg, Ni+V, Pb+Cu+Zn, Cd, Fe and K), representing a simplified model of a National survey. The data matrix model was used to explore the efficiency with which Principal Components Analysis (PCA), without and with Varimax rotation, could derive the imposed gradients. The dependence of PCA on outliers was decreased by log-transformation of data. The Components derived from non-rotated PCA were confounded by bipolar clusters and oblique gradients, both resulting in superimposition of two independent gradients on one Component. Therefore…
Calibration of denitrifying activity of polyphosphate accumulating organisms in an extended ASM2d model
2010
Abstract This paper presents the results of an experimental study for the modelling and calibration of denitrifying activity of polyphosphate accumulating organisms (PAOs) in full-scale WWTPs that incorporate simultaneous nitrogen and phosphorus removal. The convenience of using different yields under aerobic and anoxic conditions for modelling biological phosphorus removal processes with the ASM2d has been demonstrated. Thus, parameter ηPAO in the model is given a physical meaning and represents the fraction of PAOs that are able to follow the DPAO metabolism. Using stoichiometric relationships, which are based on assumed biochemical pathways, the anoxic yields considered in the extended A…
General Principles for the Detection of Modified Nucleotides in RNA by Specific Reagents.
2021
Epitranscriptomics heavily rely on chemical reagents for the detection, quantification, and localization of modified nucleotides in transcriptomes. Recent years have seen a surge in mapping methods that use innovative and rediscovered organic chemistry in high throughput approaches. While this has brought about a leap of progress in this young field, it has also become clear that the different chemistries feature variegated specificity and selectivity. The associated error rates, e.g., in terms of false positives and false negatives, are in large part inherent to the chemistry employed. This means that even assuming technically perfect execution, the interpretation of mapping results issuin…
Fauna Europaea: Hymenoptera - Apocrita (excl. Ichneumonoidea)
2015
Fauna Europaea provides a public web-service with an index of scientific names (including important synonyms) of all living European land and freshwater animals, their geographical distribution at country level (up to the Urals, excluding the Caucasus region), and some additional information. The Fauna Europaea project covers about 230,000 taxonomic names, including 130,000 accepted species and 14,000 accepted subspecies. This represents a huge effort by more than 400 contributing specialists throughout Europe and is a unique (standard) reference suitable for many users in science, government, industry, nature conservation and education. Hymenoptera is one of the four largest orders of inse…
Measurement of transport phenomena of volatile compounds: A review
2008
International audience; Measurement of the transport phenomena of volatile compounds is a central preoccupation in food flavour and is the subject of the present paper. After a theoretical reminder concerning transport phenomena, the methods used for the measurement of diffusion and mass transfer of volatile compounds are described with their principles, main advantages and drawbacks. These methods are illustrated by some results obtained for flavoured model food products.Several methods characterized by the type of diffusion coefficient measured, the method basis, the scale at which diffusion is measured and the means used to detect the diffusing molecule, are available to determine diffus…
Stochastic resonance effect on the vibratory signals of stink bugs
2007
In this work we investigate the role of the environmental noise in the sexual communication between individuals of the Sicilian green stink bug Nezara Viridula. Our goal is to analyze the spectral features of several types of songs emitted by these insects and to find the amplitude threshold value. Below this value the signal is so weak that no neuronal activation occurs in Nezara Viridula. The presence of activation is revealed by performing directionality tests and observing the behavioral response of the insect in localizing the source of vibratory signals. Afterwards experiments are performed by using a sub-threshold signal added to a white Gaussian noise. The response of the test insec…
Environmental Noise and Nonlinear Relaxation in Biological Systems
2012
We analyse the effects of environmental noise in three different biological systems: (i) mating behaviour of individuals of 'Nezara viridula' (L.) (Heteroptera Pentatomidae); (ii) polymer translocation in crowded solution; (iii) an ecosystem described by a Verhulst model with a multiplicative Lèvy noise. Specifically, we report on experiments on the behavioural response of 'N. viridula' individuals to sub-threshold deterministic signals in the presence of noise. We analyse the insect response by directionality tests performed on a group of male individuals at different noise intensities. The percentage of insects which react to the sub-threshold signal shows a non-monotonic behavior, charac…
Applications of Super Resolution Expansion Microscopy in Yeast
2021
Super-resolution microscopy includes multiple techniques in optical microscopy that enable sub-diffraction resolution fluorescence imaging of cellular structures. Expansion microscopy (EXM) is a method of physical expansion to obtain super-resolution images of a biological sample on conventional microscopy. We present images of yeast organelles, applying the combination of super-resolution and ExM techniques. When preparing pre-expanded samples, conventional methods lead to breakage of dividing yeast cells and difficulties in studying division-related proteins. Here, we describe an improved sample preparation technique that avoids such damage. ExM in combination with Airyscan and structured…
Simulations and Experiments in Protein Folding
2014
The interplay between simulations and experiments of protein folding has largely contributed to the elucidation of many important aspects of the phenomenon. In this chapter, I briefly describe the experiments which provide information on the kinetics of the protein folding process, and help to characterize the folding transition state. Then, I show how to probe the kinetics of protein folding using molecular dynamics simulations, how to compare the simulations with the experiments and how to help and rationalize the latter, ultimately offering a molecular picture of the process. After the production of suitable molecular dynamics simulation data in the form of trajectories, the procedure in…