Search results for "Biota"

showing 10 items of 679 documents

The impact of liquid-pressurized extracts of Spirulina, Chlorella and Phaedactylum tricornutum on in vitro antioxidant, antiinflammatory and bacteria…

2022

The impact of Spirulina, Chlorella and Phaeodactylum tricornutum (P. tricornutum) microalgal extracts obtained by pressurized liquid extraction (PLE) on antioxidant and anti-inflammatory activities, microbial growth and in vitro gut microbiota composition was evaluated. PLE, compared to conventional extraction, led to a significant (p < 0.05) increase in proteins, carbohydrates, polyphenols, and antioxidant capacities of the three microalgal extracts. Moreover, Spirulina and P. tricornutum extracts significantly (p < 0.05) reduced the in vitro activation of the inflammatory NF-κB pathway. The microalgal extracts had also an inhibitory effect on the pathogenic bacteria while potential benefi…

PolyphenolSCFAsBacteriaPLEProbioticsAnti-bacteriaNF-kappa BAnti-Inflammatory AgentsCarbohydratesGeneral MedicineChlorellaGut microbiotaFatty Acids VolatileAntioxidantsAnalytical ChemistryGastrointestinal MicrobiomeAlguesSpirulinaMicroalgaeHumansMicroalgalFood ScienceAntiinflamatoris
researchProduct

An individual-based dataset of carbon and nitrogen isotopic data of Callinectes sapidus in invaded Mediterranean waters

2022

The characterisation of functional traits of non-indigenous and invasive species is crucial to assess their impact within invaded habitats. Successful biological invasions are often facilitated by the generalist diet of the invaders which can modify their trophic position and adapt to new ecosystems determining changes in their structure and functioning. Invasive crustaceans are an illustrative example of such mechanisms since their trophic habits can determine important ecological impacts on aquatic food webs. The Atlantic blue crab Callinectes sapidus is currently established and considered invasive in the Mediterranean Sea where it has been recorded for the first time between 1947 and 19…

PortunoideaArthropodaBrachyuraQH301-705.5Eubrachyuratrophic positioninvasive speciesPleocyemataDecapodainvasive specieHeterotremataPortuninaestable isotopeAnimaliaPortunidaeBiology (General)MalacostracaEcology Evolution Behavior and SystematicsTECNOLOGIA DEL MEDIO AMBIENTEtransitionalEcologyInvasive speciesInvaded Stable methodologyfungifood and beveragesisotopic nicheBiotaAtlantic blue crabtransitional waterCallinectesAtlantic blue crab Invasive species isotopic niche stable isotope transitional water trophic positionCallinectes sapidusBiodiversity Data Journal
researchProduct

Evaluation of Changes in Gut Microbiota in Patients with Crohn’s Disease after Anti-Tnfα Treatment: Prospective Multicenter Observational Study

2020

Background: Crohn’s disease is believed to result from the interaction between genetic susceptibility, environmental factors and gut microbiota, leading to an aberrant immune response. The objectives of this study are to evaluate the qualitative and quantitative changes in the microbiota of patients with Crohn’s disease after six months of anti-tumor-necrosis factor (anti-TNFα) (infliximab or adalimumab) treatment and to determine whether these changes lead to the recovery of normal microbiota when compared to a control group of healthy subjects. In addition, we will evaluate the potential role of the Faecalibacterium prausnitzii/Escherichia coli and Faecalibacterium prausnitzii/Clostridium…

Project ReportCrohn’s diseasemedicine.medical_specialtyanti-TNFαHealth Toxicology and MutagenesisFaecalibacterium prausnitziilcsh:MedicineDiseaseGut flora03 medical and health sciences0302 clinical medicineCrohn DiseaseInternal medicinemedicineAdalimumabEscherichia coli and Clostridium coccoides groupHumansProspective Studies030304 developmental biology0303 health sciencesCrohn's diseasebiologygut microbiotabusiness.industryFaecalibacterium prausnitziiTumor Necrosis Factor-alphalcsh:RPublic Health Environmental and Occupational Healthmedicine.diseasebiology.organism_classificationInfliximabGastrointestinal MicrobiomeDysbiosis030211 gastroenterology & hepatologyCalprotectinbusinessDysbiosismedicine.drugInternational Journal of Environmental Research and Public Health
researchProduct

Pathogens and host immunity in the ancient human oral cavity.

2014

Calcified dental plaque (dental calculus) preserves for millennia and entraps biomolecules from all domains of life and viruses. We report the first high-resolution taxonomic and protein functional characterization of the ancient oral microbiome and demonstrate that the oral cavity has long served as a reservoir for bacteria implicated in both local and systemic disease. We characterize: (i) the ancient oral microbiome in a diseased state, (ii) 40 opportunistic pathogens, (iii) the first evidence of ancient human-associated putative antibiotic resistance genes, (iv) a genome reconstruction of the periodontal pathogen Tannerella forsythia, (v) 239 bacterial and 43 human proteins, allowing co…

ProteomeMolecular Sequence Data610 Medicine & health10071 Functional Genomics Center ZurichDental plaqueArticlePrehistòriaBacterial geneticsPeriodontal pathogenMicrobiology1311 GeneticsTandem Mass SpectrometryGermanyRNA Ribosomal 16SGeneticsmedicineTannerella forsythiaHumansDental CalculusMicrobiomePathogenPhylogenyMouthbiologyBase SequenceEcologyBacteroidetesMicrobiotaSequence Analysis DNAbiology.organism_classificationmedicine.diseaseRed complexHistory Medieval10182 Institute of Oral Biologystomatognathic diseasesArchaeology10076 Center for Integrative Human Physiology11294 Institute of Evolutionary Medicine570 Life sciences; biologyOral MicrobiomeFood AnalysisGenome BacterialNature genetics
researchProduct

Art‐omics: multi‐omics meet archaeology and art conservation

2020

Summary Multi‐omics can informally be described as the combined use of high‐throughput techniques allowing the characterization of complete microbial communities by the sequencing/identification of total pools of biomolecules including DNA, proteins or metabolites. These techniques have allowed an unprecedented level of knowledge on complex microbial ecosystems, which is having key implications in land and marine ecology, industrial biotechnology or biomedicine. Multi‐omics have recently been applied to artistic or archaeological objects, with the goal of either contributing to shedding light on the original context of the pieces and/or to inform conservation approaches. In this minireview,…

ProteomicsComputer sciencelcsh:BiotechnologyBioengineeringContext (language use)Industrial biotechnologyApplied Microbiology and BiotechnologyBiochemistryConservation03 medical and health scienceslcsh:TP248.13-248.65HumansMetabolomicsBiomedicine030304 developmental biology0303 health sciences030306 microbiologybusiness.industryMicrobiotaMinireviewsOmicsArchaeologyArchaeologyMetagenomicsMulti omicsIdentification (biology)MetagenomicsMinireviewbusinessBiotechnologyMicrobial Biotechnology
researchProduct

Analysis of the effects of microbiome-related confounding factors on the reproducibility of the volatolomic test.

2016

Volatile organic compound (VOC) testing in breath has potential in gastric cancer (GC) detection. Our objective was to assess the reproducibility of VOCs in GC, and the effects of conditions modifying gut microbiome on the test results. Ten patients with GC were sampled for VOC over three consecutive days; 17 patients were sampled before and after H. pylori eradication therapy combined with a yeast probiotic; 61 patients were sampled before and after bowel cleansing (interventions affecting the microbiome). The samples were analyzed by: (1) gas chromatography linked to mass spectrometry (GC-MS), applying the non-parametric Wilcoxon test (level of significance p    0.05); (2) by cross-reacti…

Pulmonary and Respiratory MedicineMalemedicine.medical_specialtyPathologyColonoscopyGastroenterologyGas Chromatography-Mass Spectrometrylaw.invention03 medical and health sciencesProbiotic0302 clinical medicinelawStomach NeoplasmsInternal medicinemedicineHumansMicrobiomeAgedAged 80 and overReproducibilityVolatile Organic Compoundsmedicine.diagnostic_testChemistryMicrobiotaConfoundingReproducibility of ResultsMiddle AgedRegimenBreath Tests030220 oncology & carcinogenesis030211 gastroenterology & hepatologyFemaleGas chromatographyGas chromatography–mass spectrometryJournal of breath research
researchProduct

Alkyl polychlorobibenzyls and planar aromatic chlorocompounds in pulp mill products, effluents, sludges and exposed biota

1992

Abstract Aromatic chlorocompounds which interfere in GC/MS analysis of dioxins were studied in samples from three different pulp mills and in fish and mussels exposed to pulp mill effluents. The major interfering compounds were chlorinated alkyl bibenzyls (R-PCBBs; R = C5-alkyl; P = 1–4). In pulp mill samples, levels of C5-PCBBs (10–120 ng/l in effluents, 5–33 ng/g in dried sludges) were orders of magnitude higher than the levels of toxic PCDDs and PCDFs. C5-PCBBs bioaccumulated slightly to the recipient fish (0–2 pg/g in fresh muscles) and to incubated mussels (3–26 ng/g in lipid). In mussels, significant levels (19–73 ng/g in lipid) of other than pulp mill originated toxic hepta- and octa…

Pulp millchemistry.chemical_classificationEnvironmental EngineeringChromatographyChemistryHealth Toxicology and MutagenesisPulp (paper)digestive oral and skin physiologyPublic Health Environmental and Occupational HealthMs analysisfood and beveragesBiotaGeneral MedicineGeneral Chemistryengineering.materialcomplex mixturesPollutionIndustrial waste waterchemistry.chemical_compoundSulfiteEnvironmental chemistryengineeringEnvironmental ChemistryEffluentAlkylChemosphere
researchProduct

The Endometrial Microbiome and Its Impact on Human Conception

2021

Changes in the female genital tract microbiome are consistently correlated to gynecological and obstetrical pathologies, and tract dysbiosis can impact reproductive outcomes during fertility treatment. Nonetheless, a consensus regarding the physiological microbiome core inside the uterine cavity has not been reached due to a myriad of study limitations, such as sample size and experimental design variations, and the influence of endometrial bacterial communities on human reproduction remains debated. Understanding the healthy endometrial microbiota and how changes in its composition affect fertility would potentially allow personalized treatment through microbiome management during assisted…

QH301-705.5microbiomeReviewCatalysisInorganic ChemistryEndometriumreproductive tract microbiotaPregnancyHumansPhysical and Theoretical ChemistryBiology (General)Molecular BiologyQD1-999Spectroscopyendometrial microbiotaassisted reproductive technologiesVirulenceuterusMicrobiotaOrganic ChemistryPregnancy Outcomehuman reproductionGeneral MedicineComputer Science ApplicationsChemistryreproductive outcomesFertilizationDysbiosisFemaleinfertilityInternational Journal of Molecular Sciences
researchProduct

Impact of probiotic Saccharomyces boulardii on the gut microbiome composition in HIV-treated patients: A double-blind, randomised, placebo-controlled…

2017

Dysbalance in gut microbiota has been linked to increased microbial translocation, leading to chronic inflammation in HIV-patients, even under effective HAART. Moreover, microbial translocation is associated with insufficient reconstitution of CD4+T cells, and contributes to the pathogenesis of immunologic non-response. In a double-blind, randomised, placebo-controlled trial, we recently showed that, compared to placebo, 12 weeks treatment with probiotic Saccharomyces boulardii significantly reduced plasma levels of bacterial translocation (Lipopolysaccharide-binding protein or LBP) and systemic inflammation (IL-6) in 44 HIV virologically suppressed patients, half of whom (n = 22) had immun…

RNA virusesMale0301 basic medicinePlacebo-controlled studylcsh:MedicineHIV InfectionsGut floraPathology and Laboratory MedicineSystemic inflammationlaw.inventionPlacebosProbiotic0302 clinical medicineImmunodeficiency ViruseslawMedicine and Health SciencesMedicinelcsh:ScienceImmune ResponseMultidisciplinarybiologyMicrobiotaGenomicsMiddle AgedProbiòticsBacterial PathogensIntestinesSaccharomyces boulardiiMedical MicrobiologyViral PathogensVirusesFemale030211 gastroenterology & hepatologyPathogensmedicine.symptomResearch ArticleSaccharomyces boulardiiAdultImmunologyMicrobial GenomicsMicrobiologySaccharomyces03 medical and health sciencesSigns and SymptomsImmune systemDouble-Blind MethodDiagnostic MedicineRetrovirusesGeneticsVIH (Virus)HumansMicrobiomeMicrobial PathogensInflammationClostridiumBacteriabusiness.industryProbioticsGut BacteriaLentivirusLachnospiraceaelcsh:ROrganismsFungiBiology and Life SciencesHIVbiology.organism_classificationYeast030104 developmental biologyImmunologylcsh:QMicrobiomebusinessPLoS ONE
researchProduct

The Origin of Heavy Metals and Radionuclides Accumulated in the Soil and Biota Samples Collected in Svalbard, Near Longyearbyen

2017

Abstract Heavy metals and radioactive compounds are potentially hazardous substances for plants, animals and humans in the Arctic. A good knowledge of the spatial variation of these substances in soil and primary producers, and their sources, is therefore essential. In the samples of lichen Thamnolia vermicularis, Salix polaris and Cassiope tetragona, and the soil samples collected in 2014 in Svalbard near Longyearbyen, the concentrations of the following heavy metals were determined: Mn, Ni, Cu, Zn, Cd, Pb and Hg, as well as the activity concentrations of the following: K-40, Cs-137, Pb-210, Pb-212, Bi-212, Bi-214, Pb-214, Ac-228, Th-231 and U-235 in the soil samples. The differences in th…

RadionuclideEnvironmental Engineering010504 meteorology & atmospheric sciencesChemistryEcologyEcology (disciplines)Heavy metalsBiota010501 environmental sciences01 natural sciencesEnvironmental chemistryBiomonitoringEnvironmental ChemistryGleba0105 earth and related environmental sciencesEcological Chemistry and Engineering S
researchProduct