Search results for "CLONING"

showing 10 items of 498 documents

Isolation and characterization of a cDNA encoding rat liver cytosolic epoxide hydrolase and its functional expression in Escherichia coli.

1993

A cDNA of 1992 base pairs encoding the complete rat liver cytosolic epoxide hydrolase has been isolated using a polymerase chain reaction-derived DNA fragment (Arand, M., Knehr, M., Thomas, H., Zeller, H. D., and Oesch, F. (1991) FEBS Lett. 294, 19-22) known to represent the 3'-end of the cytosolic epoxide hydrolase mRNA. Sequence analysis revealed an open reading frame of 1662 nucleotides corresponding to 554 amino acids (M(r) = 62,268). The DNA sequence obtained did not display significant homology to the sequences of microsomal epoxide hydrolase or leukotriene A4 hydrolase or to any other DNA included in the EMBL Data Bank (release 32). On Northern blotting of rat liver RNA, a single mRN…

Epoxide hydrolase 2Male1303 BiochemistryBase pairMolecular Sequence DataRestriction Mapping10050 Institute of Pharmacology and Toxicology610 Medicine & healthBiologyBiochemistryLeukotriene-A4 hydrolase1307 Cell BiologyRats Sprague-Dawleychemistry.chemical_compoundCytosolFenofibrateComplementary DNA1312 Molecular BiologyEscherichia coliAnimalsAmino Acid SequenceCloning MolecularEpoxide hydrolaseMolecular BiologyPeroxisomal targeting signalEpoxide HydrolasesBase SequenceCell BiologyDNABlotting NorthernMolecular biologyRatschemistryBiochemistryLiverMicrosomal epoxide hydrolase570 Life sciences; biologyDNAThe Journal of biological chemistry
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Expression of Active Streptolysin O in Escherichia coli as a Maltose-Binding-Protein-Streptolysin-O Fusion Protein. The N-Terminal 70 Amino Acids are…

1996

Streptolysin 0 (SLO) is the prototype of a family of cytolysins that consists of proteins which bind to cholesterol and form very large transmembrane pores. Structure/function studies on the pore-forming cytolysin SLO have been complicated by the proteolytic inactivation of a substantial portion of recombinant SLO (rSLO) expressed in Escherichia coli. To overcome this problem, translational fusions between the E. coli maltose-binding protein (MBP) gene and SLO were constructed, using the vectors pMAL-p2 and pMAL-c2. MBP-SLO fusion proteins were degraded if secreted into the E. coli periplasm, but intact, soluble MBP-SLO fusion proteins were produced at high levels in the cytoplasm. Active S…

ErythrocytesMonosaccharide Transport Proteinsgenetic structuresProtein ConformationStreptococcus pyogenesRecombinant Fusion ProteinsMolecular Sequence Datamedicine.disease_causeHemolysisBiochemistryMaltose-Binding ProteinsStructure-Activity RelationshipMaltose-binding proteinProtein structureBacterial ProteinsEscherichia colimedicineHumansCloning MolecularEscherichia coliSequence DeletionPore-forming toxinBase SequencebiologyEscherichia coli ProteinsFluoresceinsFusion proteineye diseasesTransmembrane proteinBiochemistryLiposomesStreptolysinsbiology.proteinATP-Binding Cassette TransportersStreptolysinsense organsCytolysinCarrier ProteinsSequence AnalysisEuropean Journal of Biochemistry
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Scientific production in bioethics in Spain through MEDLINE

2007

Fundamento: Describir la producción científica española en bioética entre 1966 y 2003. Métodos: Se seleccionaron los documentos publicados por autores españoles y recogidos en la base de datos MEDLINE, mediante el cruce de las palabras bioética con otras diversas del mismo ámbito. Resultados: Se estudiaron 858 documentos, de los cuales 78 (9,1%) se publicaron entre 1966 y 1983, 163 (19%) entre 1984 y 1993, y 617 (71,9%) entre 1994 y 2003. Los principales temas publicados fueron: legislación y derechos (15,4%) e investigación y comités de ética (13,1%). En el último período se ha observado un aumento significativo de las publicaciones sobre genética y clonación y un descenso sobre las de abo…

Ethicsmedicine.medical_specialtybusiness.industryMEDLINEPublicationsScientific productionÉticaPublic Health Environmental and Occupational HealthAlternative medicineMEDLINEEthics committeeLibrary scienceBioethicsBioethicsAbortionBibliometricsSpainPublicacionesBibliometríamedicinebusinessMedline databaseHuman cloningBioéticaGaceta Sanitaria
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Novel mechanism for the radiation-induced bystander effect: nitric oxide and ethylene determine the response in sponge cells.

2006

Until now the bystander effect had only been described in vertebrates. In the present study the existence of this effect has been demonstrated for the phylogenetically oldest metazoan phylum, the Porifera. We used the demosponge Suberites domuncula for the experiments in the two-chamber-system. The lower dish contained irradiated "donor" cells (single cells) and the upper dish the primmorphs ("recipient" primmorphs). The "donor" cells were treated with UV-B light (40 mJ/cm2) and 100 microM hydrogen peroxide (H2O2), factors that exist also in the natural marine aquatic environment of sponges; these factors caused a high level of DNA strand breaks followed by a reduced viability of the cells.…

EthyleneDNA ComplementaryDNA damageCell SurvivalUltraviolet RaysHealth Toxicology and MutagenesisMolecular Sequence DataGene ExpressionApoptosisBiologyNitric OxideModels BiologicalNitric oxideAmidohydrolaseschemistry.chemical_compoundGene expressionGeneticsBystander effectAnimalsAmino Acid SequenceCloning MolecularMolecular BiologyNitriteschemistry.chemical_classificationBase SequenceSequence Homology Amino AcidEthylenesbiology.organism_classificationCell biologyAmino acidPoriferaSuberites domunculachemistryBiochemistryApoptosisDNA DamageMutation research
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Characterization of PAMP/PRR interactions in European eel (Anguilla anguilla) macrophage-like primary cell cultures

2013

The eel (Anguilla anguilla) has been identified as a vulnerable species with stocks dramatically declining over the past decade. In an effort to support the species from overfishing of wild stocks increased interest in eel aquaculture has been notable. In order to expand the scarce knowledge concerning the biology of this species significant research efforts are required in several fields of biology. The development of cell culture systems to study the immune response is a key step towards an increased understanding of the immune response and to develop resources to support further study in this threatened species. Macrophages are one of the most important effector cells of the innate immun…

Fish ProteinsLipopolysaccharidesStaphylococcus aureusDNA ComplementaryMolecular Sequence DataPeptidoglycanSaccharomyces cerevisiaeAquatic ScienceBiologyPolymerase Chain ReactionImmune systemEscherichia coliAnimalsEnvironmental ChemistryMacrophageAmino Acid SequenceRNA MessengerCloning MolecularReceptorCells CulturedPhylogenyHead KidneyInnate immune systemBase SequenceEffectorMacrophagesZymosanGeneral MedicineAnguillaImmunity InnateCell biologyTLR2Gene Expression RegulationCell cultureImmunologySequence AlignmentFish & Shellfish Immunology
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cDNA sequence and tissue expression of an antimicrobial peptide, dicentracin; a new component of the moronecidin family isolated from head kidney leu…

2007

A 483-bp cDNA was isolated from sea bass (Dicentrarchus labrax) head kidney leukocytes, dicentracin, using PCR primers designed from conserved moronecidin domains. Gene bank analysis revealed that dicentracin cDNA belongs to the moronecidin family. As deduced from alignment with Morone chrysops moronecidin, the precursor of 79 aa appeared to be composed of a signal peptide of 22 aa, followed by the mature AMP (antimicrobial peptide) of 22 aa named dicentracin, and a C-terminal extension of 35 aa. Dicentracin precursor displayed 3 aa substitutions with other moronecidin sequence but none in the mature peptide sequence. Using in situ hybridization assay, dicentracin gene expression was observ…

Fish ProteinsSignal peptideDNA ComplementaryPhysiologyMolecular Sequence DataIn situ hybridizationBiologyKidneyBiochemistryPeritoneal cavityComplementary DNAGene expressionLeukocytesmedicineAnimalsAmino Acid SequenceRNA MessengerCloning MolecularSea bassPeritoneal CavityMolecular BiologyPeptide sequencePhylogenyHead KidneyBase SequenceSequence Homology Amino AcidMolecular biologymedicine.anatomical_structureGene Expression RegulationBassAntimicrobial Cationic Peptides
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Spatial Distribution of Fungal Communities in an Arable Soil.

2015

Fungi are prominent drivers of ecological processes in soils, so that fungal communities across different soil ecosystems have been well investigated. However, for arable soils taxonomically resolved fine-scale studies including vertical itemization of fungal communities are still missing. Here, we combined a cloning/Sanger sequencing approach of the ITS/LSU region as marker for general fungi and of the partial SSU region for arbuscular mycorrhizal fungi (AMF) to characterize the microbiome in different maize soil habitats. Four compartments were analyzed over two annual cycles 2009 and 2010: a) ploughed soil in 0-10 cm, b) rooted soil in 40-50 cm, c) root-free soil in 60-70 cm soil depth a…

Fungal StructureSoil ScienceSequence Databaseslcsh:MedicineCropsMycologyResearch and Analysis MethodsSoilDatabase and Informatics MethodsModel OrganismsPlant and Algal ModelsGrassesMolecular Biology TechniquesSequencing Techniqueslcsh:ScienceMolecular BiologySoil MicrobiologyEcologyMicrobiotaEcology and Environmental Scienceslcsh:ROrganismsFungiCorrectionBiology and Life SciencesAgricultureSoil EcologyPlantsYeastMaizeBiological DatabasesCommunity Ecologylcsh:QSequence AnalysisResearch ArticleCloningCrop ScienceCereal CropsPLoS ONE
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Biofilm formation byCandida albicansmutants for genes coding fungal proteins exhibiting the eight-cysteine-containing CFEM domain

2006

Several features and functions of a Candida albicans gene, PGA10 (also designated as RBT51), coding for a putative polypeptide species belonging to a subset of fungal proteins containing an eight-cysteine domain referred as CFEM (Common in several Fungal Extracellular Membrane proteins), are described. The ORF of the gene (ORF19.5674) encoded a protein of 250 amino acids, with a predicted molecular mass of 25.17 kDa. The product of the PGA10 gene also exhibited some features reminiscent of a class II-type hydrophobin. Deletion of PGA10 resulted in a cascade of pleiotropic effects, mostly affecting cell-surface-related properties. Thus, the null pga10Delta mutant displayed an increased sensi…

Fungal proteinHydrophobinMutantBiofilmGeneral MedicineBiologybiology.organism_classificationApplied Microbiology and BiotechnologyMicrobiologyCorpus albicansProtein Structure TertiaryMicrobiologyFungal ProteinsBiochemistryMembrane proteinBiofilmsCandida albicansMutationCloning MolecularCandida albicansGeneFEMS Yeast Research
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The nuclear protein Sge1 of Fusarium oxysporum is required for parasitic growth

2009

Dimorphism or morphogenic conversion is exploited by several pathogenic fungi and is required for tissue invasion and/or survival in the host. We have identified a homolog of a master regulator of this morphological switch in the plant pathogenic fungus Fusarium oxysporum f. sp. lycopersici. This non-dimorphic fungus causes vascular wilt disease in tomato by penetrating the plant roots and colonizing the vascular tissue. Gene knock-out and complementation studies established that the gene for this putative regulator, SGE1 (SIX Gene Expression 1), is essential for pathogenicity. In addition, microscopic analysis using fluorescent proteins revealed that Sge1 is localized in the nucleus, is no…

FusariumQH301-705.5[SDV]Life Sciences [q-bio]ImmunologyGenes FungalMolecular Sequence Datachampignon phytopathogèneMicrobiologyPlant RootsMicrobiologyHost-Parasite InteractionsFungal ProteinsFusariumSolanum lycopersicumVirologyGene Expression Regulation FungalFusarium oxysporumGeneticsAmino Acid SequenceBiology (General)Cloning MolecularMolecular BiologyVascular tissuePhylogenyWilt diseaseRegulation of gene expressionCell NucleusFungal proteinbiologyOrganisms Genetically ModifiedSequence Homology Amino AcidEffectorfungifood and beveragesNuclear ProteinsPathogenic fungusRC581-607Microbiology/Plant-Biotic Interactionsbiology.organism_classificationPathology/Molecular Pathology[SDE]Environmental SciencesParasitologyImmunologic diseases. AllergyResearch ArticleTranscription FactorsPLoS Pathogens
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The Cell Cycle-Specific Growth-Inhibitory Factor Produced by Actinobacillus actinomycetemcomitans Is a Cytolethal Distending Toxin

1998

ABSTRACT Actinobacillus actinomycetemcomitans has been shown to produce a soluble cytotoxic factor(s) distinct from leukotoxin. We have identified in A. actinomycetemcomitans Y4 a cluster of genes encoding a cytolethal distending toxin (CDT). This new member of the CDT family is similar to the CDT produced by Haemophilus ducreyi . The CDT from A. actinomycetemcomitans was produced in Escherichia coli and was able to induce cell distension, growth arrest in G 2 /M phase, nucleus swelling, and chromatin fragmentation in HeLa cells. The three proteins, CDTA, -B and -C, encoded by the cdt locus were all required for toxin activity. Antiserum raised against recombinant CDTC completely inhibited …

G2 PhaseCytolethal distending toxin[SDV]Life Sciences [q-bio]Bacterial ToxinsMolecular Sequence DataRestriction MappingImmunologyMitosismedicine.disease_causeAggregatibacter actinomycetemcomitansMicrobiologyVirulence factorMicrobiologyEscherichia colimedicineHumansAmino Acid SequenceCloning MolecularEscherichia coliBase SequencebiologyToxinACTIVITEAggregatibacter actinomycetemcomitansGENETIQUECell cyclebiology.organism_classificationGrowth InhibitorsRecombinant Proteins[SDV] Life Sciences [q-bio]Infectious DiseasesGenes BacterialMultigene FamilyActinobacillusMolecular and Cellular PathogenesisParasitologyHaemophilus ducreyiHeLa CellsInfection and Immunity
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