Search results for "COD"
showing 10 items of 2985 documents
Smoothed Spherical Truncation based on Fuzzy Membership Functions: Application to the Molecular Encoding.
2019
A novel spherical truncation method, based on fuzzy membership functions, is introduced to truncate interatomic (or interaminoacid) relations according to smoothing values computed from fuzzy membership degrees. In this method, the molecules are circumscribed into a sphere, so that the geometric centers of the molecules are the centers of the spheres. The fuzzy membership degree of each atom (or aminoacid) is computed from its distance with respect to the geometric center of the molecule, by using a fuzzy membership function. So, the smoothing value to be applied in the truncation of a relation (or interaction) is computed by averaging the fuzzy membership degrees of the atoms (or aminoacid…
Pharmacophore-Based Design of New Chemical Scaffolds as Translational Readthrough-Inducing Drugs (TRIDs)
2020
[Image: see text] Translational readthrough-inducing drugs (TRIDs) rescue the functional full-length protein expression in genetic diseases, such as cystic fibrosis, caused by premature termination codons (PTCs). Small molecules have been developed as TRIDs to trick the ribosomal machinery during recognition of the PTC. Herein we report a computational study to identify new TRID scaffolds. A pharmacophore approach was carried out on compounds that showed readthrough activity. The pharmacophore model applied to screen different libraries containing more than 87000 compounds identified four hit-compounds presenting scaffolds with diversity from the oxadiazole lead. These compounds have been s…
Joint Gaussian processes for inverse modeling
2017
Solving inverse problems is central in geosciences and remote sensing. Very often a mechanistic physical model of the system exists that solves the forward problem. Inverting the implied radiative transfer model (RTM) equations numerically implies, however, challenging and computationally demanding problems. Statistical models tackle the inverse problem and predict the biophysical parameter of interest from radiance data, exploiting either in situ data or simulated data from an RTM. We introduce a novel nonlinear and nonparametric statistical inversion model which incorporates both real observations and RTM-simulated data. The proposed Joint Gaussian Process (JGP) provides a solid framework…
Optimal modalities for radiative transfer-neural network estimation of canopy biophysical characteristics: Evaluation over an agricultural area with …
2011
International audience; Neural networks trained over radiative transfer simulations constitute the basis of several operational algorithms to estimate canopy biophysical variables from satellite reflectance measurements. However, only little attention was paid to the training process which has a major impact on retrieval performances. This study focused on the several modalities of the training process within neural network estimation of LAI, FCOVER and FAPAR biophysical variables. Performances were evaluated over both actual experimental observations and model simulations. The SAIL and PROSPECT radiative transfer models were used here to simulate the training and the synthetic test dataset…
Gaussian Processes Retrieval of LAI from Sentinel-2 Top-of-Atmosphere Radiance Data
2020
Abstract Retrieval of vegetation properties from satellite and airborne optical data usually takes place after atmospheric correction, yet it is also possible to develop retrieval algorithms directly from top-of-atmosphere (TOA) radiance data. One of the key vegetation variables that can be retrieved from at-sensor TOA radiance data is leaf area index (LAI) if algorithms account for variability in atmosphere. We demonstrate the feasibility of LAI retrieval from Sentinel-2 (S2) TOA radiance data (L1C product) in a hybrid machine learning framework. To achieve this, the coupled leaf-canopy-atmosphere radiative transfer models PROSAIL-6SV were used to simulate a look-up table (LUT) of TOA radi…
Empirical and physical estimation of Canopy Water Content from CHRIS/PROBA data
2013
20 páginas, 4 tablas, 7 figuras.
Exploitation of SAR and Optical Sentinel Data to Detect Rice Crop and Estimate Seasonal Dynamics of Leaf Area Index
2017
This paper presents and evaluates multitemporal LAI estimates derived from Sentinel-2A data on rice cultivated area identified using time series of Sentinel-1A images over the main European rice districts for the 2016 crop season. This study combines the information conveyed by Sentinel-1A and Sentinel-2A into a high-resolution LAI retrieval chain. Rice crop was detected using an operational multi-temporal rule-based algorithm, and LAI estimates were obtained by inverting the PROSAIL radiative transfer model with Gaussian process regression. Direct validation was performed with in situ LAI measurements acquired in coordinated field campaigns in three countries (Italy, Spain and Greece). Res…
The stable isotope composition of organic and inorganic fossils in lake sediment records: current understanding, challenges, and future directions
2018
This paper provides an overview of stable isotope analysis (H, C, N, O, Si) of the macro- and microscopic remains from aquatic organisms found in lake sediment records and their application in (palaeo)environmental science. Aquatic organisms, including diatoms, macrophytes, invertebrates, and fish, can produce sufficiently robust remains that preserve well as fossils and can be identified in lake sediment records. Stable isotope analyses of these remains can then provide valuable insights into habitat-specific biogeochemistry, feeding ecology, but also on climatic and hydrological changes in and around lakes. Since these analyses focus on the remains of known and identified organisms, they …
The end of the Messinian salinity crisis: Evidences from the Chelif Basin (Algeria).
2007
How did the Messinian Salinity Crisis end is a matter of intense debate between two opposite concepts i.e., the generalised dilution event, the so-called Lago–Mare, followed by the sudden restoration of the marine conditions at the base of the Zanclean, or the early partial or complete marine refill that would have happened earlier during the upper Messinian. The Chelif Basin of Northwestern Algeria, one of the greatest Messinian marginal basins of the Mediterranean, provides an exceptional opportunity to study in detail how this major paleoenvironmental change occurred through continuous sedimentary records of the Miocene–Pliocene boundary. Five sections representative of both the central …
First Perigondwanan record of actinolepids (Vertebrata: Placodermi: Arthrodira) from the Lochkovian (Early Devonian) of Spain and its palaeobiogeogra…
2011
Different palaeogeographic models have been proposed for the position of Laurussia ( including Baltica) and Gondwana-derived microcontinents ( including Ibero-Armorica) during Ordovician to Late Carboniferous times. Principal differences concern the presence and duration of a large ocean, the Rheic Ocean, acting as a faunal barrier between these areas. The timing of the collision of Laurussia with Gondwana and/or Gondwana-derived terranes continues to be debated. Here we present new faunal data revealing close biogeographical relations between Ibero-Armorica ("Perigondwanan" or Gondwanan derivate terranes) and Podolia (SE margin of Baltica, in Laurussia). The placoderm assemblage found in t…