Search results for "Clos"

showing 10 items of 1439 documents

Isolation of acetic, propionic and butyric acid-forming bacteria from biogas plants.

2015

In this study, acetic, propionic and butyric acid-forming bacteria were isolated from thermophilic and mesophilic biogas plants (BGP) located in Germany. The fermenters were fed with maize silage and cattle or swine manure. Furthermore, pressurized laboratory fermenters digesting maize silage were sampled. Enrichment cultures for the isolation of acid-forming bacteria were grown in minimal medium supplemented with one of the following carbon sources: Na(+)-dl-lactate, succinate, ethanol, glycerol, glucose or a mixture of amino acids. These substrates could be converted by the isolates to acetic, propionic or butyric acid. In total, 49 isolates were obtained, which belonged to the phyla Firm…

0106 biological sciences0301 basic medicineFirmicutesSilageSwineClostridium cochleariumMolecular Sequence DataBioengineeringBacillusReal-Time Polymerase Chain Reaction01 natural sciencesApplied Microbiology and BiotechnologyDNA RibosomalZea maysMicrobiologyButyric acid03 medical and health sciencesAcetic acidchemistry.chemical_compoundBioreactors010608 biotechnologyRNA Ribosomal 16SAnimalsThermoanaerobacterium thermosaccharolyticumPhylogenyAcetic AcidDNA PrimersClostridiumSilagebiologyBacteriaBase SequenceGeneral Medicinebiology.organism_classificationLactic acidManure030104 developmental biologychemistryBiofuelsFermentationButyric AcidCattlePropionatesBacteriaGenome BacterialBiotechnologyJournal of biotechnology
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Multiple shifts to open habitats in Melastomateae (Melastomataceae) congruent with the increase of African Neogene climatic aridity

2018

International audience; AimAfrican Melastomateae (Melastomataceae) comprise c. 185 species occurring in closed or open habitats throughout sub-Saharan Africa. We sought to reconstruct biogeographical and habitat history, and shifts in diversification rates of African Melastomateae using a well-sampled, dated molecular phylogeny.LocationAmericas, sub-Saharan Africa, Madagascar, SE Asia.TaxonAngiosperms, Melastomataceae, African Melastomateae.MethodsPhylogenetic relationships were estimated based on an extensive sampling of New and Old World Melastomateae, using two nuclear and three plastid markers. Divergence times were estimated in BEAST based on three calibration priors under Bayesian unc…

0106 biological sciences0301 basic medicineOld WorlddiversificationMelastomataceaeBiogeography[SDV]Life Sciences [q-bio]divergence timeNeogene010603 evolutionary biology01 natural sciences03 medical and health sciencesopen habitatsclosed habitats[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyEcology Evolution Behavior and Systematicsbiogeographyhabitat shiftsEcologybiologyEcology15. Life on landbiology.organism_classification030104 developmental biologyGeographyTaxonHabitatMolecular phylogeneticsAfricaMelastomataceaeBiological dispersalNeogenegrassland
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Molecular signatures of silencing suppression degeneracy from a complex RNA virus

2021

As genomic architectures become more complex, they begin to accumulate degenerate and redundant elements. However, analyses of the molecular mechanisms underlying these genetic architecture features remain scarce, especially in compact but sufficiently complex genomes. In the present study, we followed a proteomic approach together with a computational network analysis to reveal molecular signatures of protein function degeneracy from a plant virus (as virus-host protein-protein interactions). We employed affinity purification coupled to mass spectrometry to detect several host factors interacting with two proteins of Citrus tristeza virus (p20 and p25) that are known to function as RNA sil…

0106 biological sciences0301 basic medicineProteomicsCitrusInteraction NetworksPathogenesisPlant Sciencemedicine.disease_causePathology and Laboratory Medicine01 natural sciencesInteractomeBiochemistryBimolecular fluorescence complementationRNA interferenceRNA silencing supressorsCitrus tristeza virusMedicine and Health SciencesDegeneracy (biology)Protein Interaction MapsBiology (General)H20 Plant diseasesPlant ProteinsEcologybiologyPlant virusesEukaryotaArgonautePlantsSmall interfering RNANucleic acidsRNA silencingComputational Theory and MathematicsGenetic interferenceExperimental Organism SystemsModeling and SimulationProteomeArgonaute ProteinsHost-Pathogen InteractionsRNA ViralEpigeneticsResearch ArticleClosterovirusRNA virusViral proteinQH301-705.5Arabidopsis ThalianaPlant PathogensComputational biologyGenome ViralBrassicaResearch and Analysis MethodsModels BiologicalPlant Viral Pathogens03 medical and health sciencesCellular and Molecular NeuroscienceViral ProteinsModel OrganismsPlant and Algal ModelsTobaccomedicineGeneticsGenomesNon-coding RNAProtein InteractionsMolecular signaturesMolecular BiologyEcology Evolution Behavior and SystematicsPlant DiseasesHost Microbial InteractionsBiology and life sciencesMass spectrometryOrganismsComputational BiologyProteinsRNA virusPlant Pathologybiology.organism_classificationGene regulationRepressor Proteins030104 developmental biologyU30 Research methodsAnimal StudiesRNAGene expression010606 plant biology & botanyF30 Plant genetics and breeding
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The combined effect on initial glucose concentration and pH control strategies for acetone-butanol-ethanol (ABE) fermentation by Clostridium acetobut…

2021

Abstract The use and depletion of fossil fuels raised the interest in biofuels like biobutanol. Clostridium acetobutylicum DSM 792 is capable of producing biobutanol through ABE fermentation. Butanol production can be influenced by low sugar concentrations, like those obtained after hydrolysis of pre-treated lignocellulosic biomass. This study aimed to evaluate the influence of the initial glucose concentrations (33, 66 and 100 g L−1) and pH control strategies on biobutanol production and glucose consumption. Uncontrolled pH fermentation exhibited low butanol production due to either glucose exhaustion (33 g L−1) or the phenomenon of acid crash (66 and 100 g L−1), which was alleviated by th…

0106 biological sciences0303 health sciencesAcidogenesisEnvironmental EngineeringClostridium acetobutylicumbiologyChemistryButanolBiomedical EngineeringLignocellulosic biomassBioengineeringbiology.organism_classification01 natural sciences03 medical and health sciencesHydrolysischemistry.chemical_compoundBiofuel010608 biotechnologyFermentationFood scienceSugar030304 developmental biologyBiotechnologyBiochemical Engineering Journal
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Spatial variability of soft-bottom macrobenthic communities in northern Sicily (Western Mediterranean): Contrasting trawled vs. untrawled areas

2016

13 páginas, 9 tablas, 5 figuras

0106 biological sciencesAquatic OrganismsStable isotope analysisTrawling impactFisheriesBenthic communitieAquatic ScienceOceanography010603 evolutionary biology01 natural sciencesBenthosBenthic communitiesDominance (ecology)AnimalsFishery exclusion zoneSpatial closureSicilySpatial closuresEcosystemTrophic levelIsotope analysisBenthic communities Continental shelf Trawling impact Fishery exclusion zones Spatial closures Stable isotope analysisStable isotope analysiEcologyTrawling010604 marine biology & hydrobiologyFishery exclusion zones;Stable isotope analysis;Continental shelf;Spatial closures;Benthic communities;Trawling impactFishery exclusion zonesGeneral Medicineδ15NBiodiversityPollutionInvertebratesFood webFisheryGeographyBenthic zoneContinental shelfEnvironmental Monitoring
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Evaluating structural and compositional canopy characteristics to predict the light-demand signature of the forest understorey in mixed, semi-natural…

2020

Questions: Light availability at the forest floor affects many forest ecosystem processes, and is often quantified indirectly through easy-to-measure stand characteristics. We investigated how three such characteristics, basal area, canopy cover and canopy closure, were related to each other in structurally complex mixed forests. We also asked how well they can predict the light-demand signature of the forest understorey (estimated as the mean Ellenberg indicator value for light [“EIVLIGHT”] and the proportion of “forest specialists” [“%FS”] within the plots). Furthermore, we asked whether accounting for the shade-casting ability of individual canopy species could improve predictions of EIV…

0106 biological sciencesCanopy[SDV]Life Sciences [q-bio]DIVERSITYAtmospheric sciences01 natural sciencescanopy closureshade-casting abilityBasal areaSOLAR-RADIATION TRANSMITTANCEherb layerlight availabilityEnvironmental planningEcologyPolicy and LawTemperate forestForestryVegetationUnderstoryPE&RCCOMMUNITYbasal areaEcosystems Researchlight transmittanceLife Sciences & BiomedicineTemperate rainforestMonitoringEnvironmental Sciences & EcologyManagement Monitoring Policy and Law010603 evolutionary biologyEcology and EnvironmentEllenberg indicator valuesunderstoreyForest ecologyGAP FORMATIONMANAGEMENTBosecologie en Bosbeheer/dk/atira/pure/core/keywords/biologyNature and Landscape ConservationForest floorScience & Technology/dk/atira/pure/core/keywords/557265479Plant SciencesSEEDLING SURVIVAL15. Life on landCOVERForest Ecology and Forest ManagementLAYEREarth and Environmental Sciencestemperate forestcanopy coverEnvironmental scienceVEGETATION010606 plant biology & botanyRESPONSESApplied Vegetation Science
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Species loss leads to community closure

2008

Global extinction of a species is sadly irreversible. At a local scale, however, extinctions may be followed by re-invasion. We here show that this is not necessarily the case and that an ecological community may close its doors for re-invasion of species lost from it. Previous studies of how communities are assembled have shown that there may be rules for that process and that limitations are set to the order by which species are introduced and put together. Instead of focusing on the assembly process we randomly generated simple competitive model communities that were stable and allowed for two to 10 coexisting species. When a randomly selected single species was removed from the communit…

0106 biological sciencesExtinctionCommunityEcological releaseFitness landscapeEcology010604 marine biology & hydrobiologyCommunity structureEndangered species15. Life on landBiology010603 evolutionary biology01 natural sciences010601 ecologyClosure (mathematics)Ecology Evolution Behavior and SystematicsTrophic levelEcology Letters
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New Mitochondrial Gene Rearrangement in Psyttalia concolor, P. humilis and P. lounsburyi (Hymenoptera: Braconidae), Three Parasitoid Species of Econo…

2020

The family Braconidae consists mostly of specialized parasitoids, some of which hold potential in biocontrol of agricultural pests. Psyttalia concolor, Psyttalia humilis and Psyttalia lounsburyi are parasitoids associated with Bactrocera oleae, a major pest of cultivated olives. The native range of Psyttalia concolor is the Mediterranean, and P. humilis and P. lounsburyi are native to sub-Saharan Africa. This study reports the mitochondrial genomes of the three species, thus laying the foundation for mitogenomic analyses in the genus Psyttalia. Comparative mitogenomics within Braconidae showed a novel gene arrangement in Psyttalia in involving translocation and inversion of transfer RNA gen…

0106 biological sciencesRange (biology)ZoologyHymenopteraphylogeny010603 evolutionary biology01 natural sciencesbraconidaeoliveParasitoid<i>Psyttalia humilis</i>03 medical and health sciencesPhylogeneticsGenusSettore AGR/07 - Genetica AgrariaBactroceralcsh:Science030304 developmental biology0303 health sciencesmitogenomicsbiologycyclostome waspsbiology.organism_classification<i>Psyttalia lounsburyi</i>cyclostome wasps mitogenomics olive phylogeny braconidae opiinae Psyttalia humilis Psyttalia lounsburyiSettore AGR/11 - Entomologia Generale E ApplicataopiinaeInsect Sciencelcsh:QPEST analysisBraconidaeInsects
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Distribution of sea urchins living near shallow water CO2 vents is dependent upon species acid-base and ion-regulatory abilities.

2013

To reduce the negative effect of climate change on Biodiversity, the use of geological CO2 sequestration has been proposed; however leakage from underwater storages may represent a risk to marine life. As extracellular homeostasis is important in determining species' ability to cope with elevated CO2, we investigated the acid-base and ion regulatory responses, as well as the density, of sea urchins living around CO2 vents at Vulcano, Italy. We conducted in situ transplantation and field-based laboratory exposures to different pCO2/pH regimes. Our results confirm that sea urchins have some ability to regulate their extracellular fluid under elevated pCO2. Furthermore, we show that even in cl…

0106 biological sciencesSettore BIO/07 - EcologiaGeological Phenomena010504 meteorology & atmospheric sciencesClimate ChangeSpecies distributionBiodiversityMarine lifeAquatic ScienceOceanography01 natural sciencesParacentrotus lividushowever leakage from underwater storages may represent a risk to marine life. As extracellular homeostasis is important in determining species' ability to cope with elevated CO2 we investigated the acid-base and ion regulatory responses as well as the density of sea urchins living around CO2 vents at Vulcano Italy. We conducted in situ transplantation and field-based laboratory exposures to different pCO2/pH regimes. Our results confirm that sea urchins have some ability to regulate their extracellular fluid under elevated pCO2. Furthermore we show that even in closely-related taxa divergent physiological capabilities underlie differences in taxa distribution around the CO2 vent. It is concluded that species distribution under the sort of elevated CO2 conditions occurring with leakages from geological storages and future ocean acidification scenarios may partly be determined by quite subtle physiological differentiation.Mediterranean seaBenthosAnimalsSeawater14. Life underwaterEcosystem0105 earth and related environmental sciencesbiologyEcology010604 marine biology & hydrobiologyTo reduce the negative effect of climate change on Biodiversity the use of geological CO2 sequestration has been proposedOcean acidificationCarbon DioxideHydrogen-Ion Concentrationbiology.organism_classificationAdaptation PhysiologicalPollutionTransplantationOceanographyItaly13. Climate actionSea UrchinsWater Pollutants Chemical
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2-methylthiazolidine and 4-ethylguaiacol, male sex pheromone components of the cockroach Nauphoeta cinerea (Dictyoptera, Bladeridae) : A reinvestigat…

1992

49 ref.; International audience; In Nauphoeta cinerea, male calling behavior is associated with sex pheromone release by the sternal glands. The male pheromone that attracts females from a distance is a mixture of 2-methylthiazolidine and 4-ethylguaiacol. It is active at very low concentrations, 0.05 and 0.01 ng, respectively. Two other compounds, 3-hydroxy-2-butanone and 2-methyl-2thiazoline, act at close range, keeping the female in the vicinity of the male. The function of the volatile pheromone and those of previously described contact pheromones are discussed in regard to their possible involvement in the establishment of male dominant-subordinate relationships.

0106 biological sciencesZoology010603 evolutionary biology01 natural sciencesBiochemistrychemistry.chemical_compoundbiology.animalMating callEcology Evolution Behavior and SystematicsNAUPHOETACockroachDICTYOPTERAbiologyEcology4-ETHYLGUAIACOLDictyopteraGeneral Medicine4-EthylguaiacolBLATTARIAbiology.organism_classificationBlaberidaeClose range010602 entomologyCOCKROACHchemistrySex pheromonePheromoneCALLING BEHAVIOR[SDE.BE]Environmental Sciences/Biodiversity and Ecology2-METHYLTHIAZOLIDINEMALE SEX PHEROMONE
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