Search results for "Cognition"

showing 10 items of 7054 documents

Engineering of a DNA Polymerase for Direct m6A Sequencing

2017

Methods for the detection of RNA modifications are of fundamental importance for advancing epitranscriptomics. N6-methyladenosine (m6A) is the most abundant RNA modification in mammalian mRNA and is involved in the regulation of gene expression. Current detection techniques are laborious and rely on antibody-based enrichment of m6A-containing RNA prior to sequencing, since m6A modifications are generally "erased" during reverse transcription (RT). To overcome the drawbacks associated with indirect detection, we aimed to generate novel DNA polymerase variants for direct m6A sequencing. Therefore, we developed a screen to evolve an RT-active KlenTaq DNA polymerase variant that sets a mark for…

0301 basic medicineAdenosineRNA-dependent RNA polymeraseDNA-Directed DNA Polymerase010402 general chemistryProtein Engineering01 natural sciencesCatalysis03 medical and health sciencesDNA polymerasesSequencing by hybridization[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]TheoryofComputation_ANALYSISOFALGORITHMSANDPROBLEMCOMPLEXITYRNA polymerase IRNA MessengerPolymerasebiologyOligonucleotideN6-methyladenosineReverse Transcriptase Polymerase Chain ReactionCommunicationMultiple displacement amplificationHigh-Throughput Nucleotide Sequencing[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biologyGeneral ChemistryDNA MethylationRNA modificationMolecular biologyReverse transcriptaseCommunications0104 chemical sciencesSequencing by ligationenzyme engineering030104 developmental biologyComputingMethodologies_PATTERNRECOGNITIONddc:540biology.proteinepitranscriptomicsRNA Methylation
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Mutanome directed cancer immunotherapy

2015

Somatic mutations are important drivers of cancer development. Accumulating evidence suggests that a significant subset of mutations result in neo-epitopes recognized by autologous T cells and thus may constitute the Achilles' heel of tumor cells. T cells directed against mutations have been shown to have a key role in clinical efficacy of potent cancer immunotherapy modalities, such as adoptive transfer of autologous tumor infiltrating lymphocytes and immune checkpoint inhibitors. Whereas these findings strengthen the idea of a prominent role of neo-epitopes in tumor rejection, the systematic therapeutic exploitation of mutations was hampered until recently by the uniqueness of the reperto…

0301 basic medicineAdoptive cell transferSomatic cellT-Lymphocytesmedicine.medical_treatmentImmune checkpoint inhibitorsImmunology03 medical and health sciences0302 clinical medicineCancer immunotherapyAntigens NeoplasmNeoplasmsAnimalsHumansImmunology and AllergyMedicineClinical efficacybusiness.industryAutologous T-cellsImmune recognition030104 developmental biology030220 oncology & carcinogenesisTumor rejectionMutationImmunologyImmunotherapybusiness
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Group analysis of ongoing EEG data based on fast double-coupled nonnegative tensor decomposition

2019

Abstract Background Ongoing EEG data are recorded as mixtures of stimulus-elicited EEG, spontaneous EEG and noises, which require advanced signal processing techniques for separation and analysis. Existing methods cannot simultaneously consider common and individual characteristics among/within subjects when extracting stimulus-elicited brain activities from ongoing EEG elicited by 512-s long modern tango music. New method Aiming to discover the commonly music-elicited brain activities among subjects, we provide a comprehensive framework based on fast double-coupled nonnegative tensor decomposition (FDC-NTD) algorithm. The proposed algorithm with a generalized model is capable of simultaneo…

0301 basic medicineAdultComputer sciencemusiikkiElectroencephalography03 medical and health sciencesYoung Adultcoupled0302 clinical medicinetensor decompositionEeg dataRobustness (computer science)medicineDecomposition (computer science)HumansmusicNonnegative tensorEEGSignal processingmedicine.diagnostic_testbusiness.industryGeneral NeuroscienceFunctional NeuroimagingBrainsignaalianalyysiPattern recognitionElectroencephalographySignal Processing Computer-AssistedMiddle Agedongoing EEGAlpha (programming language)030104 developmental biologyGroup analysisAuditory PerceptionnonnegativeArtificial intelligencebusiness030217 neurology & neurosurgeryAlgorithmsMusicärsykkeet
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The two-stage process in visual working memory consolidation

2019

AbstractTwo hypotheses have been proposed to explain the formation manner for visual working memory (VWM) representations during the consolidation process: an all-or-none process hypothesis and a coarse-to-fine process hypothesis. However, neither the all-or-none process hypothesis nor the coarse-to-fine process hypothesis can stipulate clearly how VWM representations are formed during the consolidation process. In the current study, we propose a two-stage process hypothesis to reconcile these hypotheses. The two-stage process hypothesis suggests that the consolidation of coarse information is an all-or-none process in the early consolidation stage, while the consolidation of detailed infor…

0301 basic medicineAdultMaleAdolescentComputer scienceScienceMemorizationArticle03 medical and health sciencesYoung Adult0302 clinical medicineEncoding (memory)Human behaviourHumansMemory Consolidationmuisti (kognitio)MultidisciplinaryConsolidation (soil)Working memoryvisuaalisuusQWorking memoryRtyömuistivisuaalinen muisti030104 developmental biologyMemory Short-TermPattern Recognition VisualVisual PerceptionMedicineFemale030217 neurology & neurosurgeryCognitive psychologyScientific Reports
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Cognitive network hyperactivation and motor cortex decline correlate with ALS prognosis.

2021

We aimed to quantitatively characterize progressive brain network disruption in Amyotrophic Lateral Sclerosis (ALS) during cognition using the mismatch negativity (MMN), an electrophysiological index of attention switching. We measured the MMN using 128-channel EEG longitudinally (2-5 timepoints) in 60 ALS patients and cross-sectionally in 62 healthy controls. Using dipole fitting and linearly constrained minimum variance beamforming we investigated cortical source activity changes over time. In ALS, the inferior frontal gyri (IFG) show significantly lower baseline activity compared to controls. The right IFG and both superior temporal gyri (STG) become progressively hyperactive longitudina…

0301 basic medicineAdultMaleAgingmedicine.medical_specialtyMismatch negativityPrefrontal CortexElectroencephalographyAudiologybehavioral disciplines and activities03 medical and health sciences0302 clinical medicineCognitionmedicineHumansAttentionCognitive DysfunctionAmyotrophic lateral sclerosisAgedAged 80 and overHyperactivationmedicine.diagnostic_testbusiness.industryGeneral NeuroscienceAmyotrophic Lateral SclerosisMotor CortexCognitionElectroencephalographyMiddle Agedmedicine.diseasePrognosisTemporal LobeElectrophysiology030104 developmental biologymedicine.anatomical_structureCross-Sectional StudiesDisinhibitionFemaleNeurology (clinical)Geriatrics and Gerontologymedicine.symptombusiness030217 neurology & neurosurgeryDevelopmental BiologyMotor cortexNeurobiology of aging
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Implicitly and explicitly assessed anxiety: No relationships with recognition of and brain response to facial emotions.

2019

Abstract Trait anxiety, the disposition to experience anxiety, is known to facilitate perception of threats. Trait anxious individuals seem to identify threatening stimuli such as fearful facial expressions more accurately, especially when presented under temporal constraints. In past studies on anxiety and emotion face recognition, only self-report or explicit measures of anxiety have been administered. Implicit measures represent indirect tests allowing to circumvent problems associated with self-report. In our study, we made use of implicit in addition to explicit measures to investigate the relationships of trait anxiety with recognition of and brain response to emotional faces. 75 heal…

0301 basic medicineAdultMaleBeck Anxiety InventoryEmotionsAnxietyAffect (psychology)Facial recognition systemAssociation03 medical and health sciencesYoung Adult0302 clinical medicinemedicineHumansFacial expressionmedicine.diagnostic_testGeneral NeuroscienceImplicit-association testBrainMagnetic Resonance ImagingFacial Expression030104 developmental biologyVisual PerceptionAnxietyFemalemedicine.symptomFunctional magnetic resonance imagingPsychologyFacial Recognition030217 neurology & neurosurgeryState-Trait Anxiety InventoryCognitive psychologyNeuroscience
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Predicting limiting 'free sugar' consumption using an integrated model of health behavior.

2019

Excess intake of 'free sugars' is a key predictor of chronic disease, obesity, and dental ill health. Given the importance of determining modifiable predictors of free sugar-related dietary behaviors, we applied the integrated behavior change model to predict free sugar limiting behaviors. The model includes constructs representing 'reasoned' or deliberative processes that lead to action (e.g., social cognition constructs, intentions), and constructs representing 'non-conscious' or implicit processes (e.g., implicit attitudes, behavioral automaticity) as predictors of behavior. Undergraduate students (N = 205) completed measures of autonomous and controlled motivation, the theory of planned…

0301 basic medicineAdultMaleDietary Sugarsmedia_common.quotation_subjectHealth BehaviorAutomaticity030209 endocrinology & metabolismIntentionStructural equation modeling03 medical and health sciencesYoung Adult0302 clinical medicineSocial cognitionHumansStudentsGeneral Psychologymedia_common030109 nutrition & dieteticsNutrition and DieteticsBehavior changeTheory of planned behaviorBayes TheoremFeeding BehaviorDietTranstheoretical ModelAction (philosophy)FemaleHabitImplicit attitudePsychologyPsychological TheorySocial psychologyAttitude to HealthAppetite
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Rescuing Over-activated Microglia Restores Cognitive Performance in Juvenile Animals of the Dp(16) Mouse Model of Down Syndrome.

2020

Microglia are brain-resident immune cells and regulate mechanisms essential for cognitive functions. Down syndrome (DS), the most frequent cause of genetic intellectual disability, is caused by a supernumerary chromosome 21, containing also genes related to the immune system. In the hippocampus of the Dp(16) mouse model of DS and DS individuals, we found activated microglia, as assessed by their morphology; activation markers; and, for DS mice, electrophysiological profile. Accordingly, we found increased pro-inflammatory cytokine levels and altered interferon signaling in Dp(16) hippocampi. DS mice also showed decreased spine density and activity of hippocampal neurons and hippocampus-depe…

0301 basic medicineAdultMaleDown syndromeDendritic spinemedicine.medical_treatmentAminopyridinesMice TransgenicHippocampal formationHippocampus03 medical and health sciencesMice0302 clinical medicineImmune systemCognitionMedicineHippocampus (mythology)AnimalsHumansPyrrolesNeuroinflammationMicrogliabusiness.industryGeneral NeuroscienceAnti-Inflammatory Agents Non-SteroidalAge Factorsmedicine.disease3. Good healthMice Inbred C57BLDisease Models Animal030104 developmental biologymedicine.anatomical_structureCytokinenervous systemFemaleMicrogliaDown SyndromebusinessNeuroscience030217 neurology & neurosurgeryNeuron
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Right inferior frontal gyrus implements motor inhibitory control via beta-band oscillations in humans

2021

Motor inhibitory control implemented as response inhibition is an essential cognitive function required to dynamically adapt to rapidly changing environments. Despite over a decade of research on the neural mechanisms of response inhibition, it remains unclear, how exactly response inhibition is initiated and implemented. Using a multimodal MEG/fMRI approach in 59 subjects, our results reliably reveal that response inhibition is initiated by the right inferior frontal gyrus (rIFG) as a form of attention-independent top-down control that involves the modulation of beta-band activity. Furthermore, stopping performance was predicted by beta-band power, and beta-band connectivity was directed f…

0301 basic medicineAdultMaleRight inferior frontal gyrusComputer scienceQH301-705.5ScienceBiophysicsPrefrontal Cortexstop signal taskGeneral Biochemistry Genetics and Molecular Biologypre-supplementary motor areastopping03 medical and health sciencesBeta band0302 clinical medicineCognitionInhibitory controlReaction TimeHumansresponse inhibitionBiology (General)Response inhibitionMotor areaGeneral Immunology and MicrobiologyOscillationGeneral NeuroscienceQMotor CortexRMagnetoencephalographyCognitionGeneral MedicineMagnetic Resonance ImagingattentionInhibition Psychological030104 developmental biologyMedicineFemaleBeta RhythmNeuroscience030217 neurology & neurosurgeryPsychomotor PerformanceResearch ArticleNeuroscienceHumaneLife
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Watching happy faces potentiates incentive salience but not hedonic reactions to palatable food cues in overweight/obese adults

2019

International audience; ‘Wanting’ and ‘liking’ are mediated by distinct brain reward systems but their dissociation in human appetite and overeating remains debated. Further, the influence of socioemotional cues on food reward is little explored. We examined these issues in overweight/obese (OW/OB) and normal-weight (NW) participants who watched food images varying in palatability in the same time as videoclips of avatars looking at the food images while displaying facial expressions (happy, disgust or neutral) with their gaze directed only toward the food or consecutively toward the food and participants. We measured heart rate (HR) deceleration as an index of attentional/incentive salienc…

0301 basic medicineAdultMalelikingAdolescent030209 endocrinology & metabolismOverweightwantingDevelopmental psychology03 medical and health sciencesFood PreferencesYoung Adult0302 clinical medicineRewardmedicineHumansoverweightPalatabilityObesityOvereatingincentive salienceGeneral PsychologyComputingMilieux_MISCELLANEOUSfacial expressionFacial expressionMotivation030109 nutrition & dieteticsNutrition and DieteticsSocioemotional selectivity theory[SDV.NEU.PC]Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC]/Psychology and behaviorsocial rewardDisgustIncentive salienceFemaleFrancemedicine.symptomCuesPsychologyFacial electromyography[SDV.AEN]Life Sciences [q-bio]/Food and Nutrition
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