Search results for "DAMAGE"

showing 10 items of 1289 documents

Redox regulation of genome stability by effects on gene expression, epigenetic pathways and DNA damage/repair

2015

Reactive oxygen and nitrogen species (e.g. H2O2, nitric oxide) confer redox regulation of essential cellular signaling pathways such as cell differentiation, proliferation, migration and apoptosis. In addition, classical regulation of gene expression or activity, including gene transcription to RNA followed by translation to the protein level, by transcription factors (e.g. NF-κB, HIF-1α) and mRNA binding proteins (e.g. GAPDH, HuR) is subject to redox regulation. This review will give an update of recent discoveries in this field, and specifically highlight the impact of reactive oxygen and nitrogen species on DNA repair systems that contribute to genomic stability. Emphasis will be placed …

Genome instabilityRedox signalingRNA UntranslatedEpigenetic regulation of neurogenesisDNA RepairHuR mRNA-binding protein in the 3′-untranslated regionClinical BiochemistryHDAC histone deacetylaseReview ArticleAP-1 activator protein 1BiochemistryApe-1 apurinic/apyrimidinic endonuclease 1GPx-1 glutathione peroxidase-1Epigenesis GeneticHistonesTrx thioredoxinPHD prolylhydroxylaseBER base excision repairlcsh:QH301-705.5HO-1 heme oxygenase-1EpigenomicsGeneticsRegulation of gene expressionNox member of the NADPH oxidase familylcsh:R5-920JmjC Jumonji C domain-containing histone demethylasesHIF-1α hypoxia inducible factor-1α5-hmC 5-hydroxymethylcytosineddc:Cell biologyMMP matrix metalloproteinaseGrx glutaredoxinGAPDH glyceraldehyde-3-phosphate dehydrogenaseNrf2 nuclear factor erythroid related factor 2DNA methylationEpigeneticslcsh:Medicine (General)Oxidation-ReductionSignal Transduction5-mC 5-methylcytosineDNA repairDNA damageNF-κB nuclear factor-κBBiologyGenomic InstabilityRNS reactive nitrogen speciesROS reactive oxygen speciesNER nucleotide excision repairSOD superoxide dismutaseOxyR transcription factor (hydrogen peroxide-inducible genes activator)HumansEpigeneticsOrganic ChemistryPETN pentaerithrityl tetranitrateGene regulationOxidative StressDNMT DNA methyltransferaseGene Expression Regulationlcsh:Biology (General)AREs AU-rich elementsHAT histone acetyltransferaseKeap1 kelch-like ECH-associated protein 1BiomarkersCOPD chronic obstructive pulmonary disorderDNA DamageRedox Biology
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Molecular and physiological consequences of faulty eukaryotic ribonucleotide excision repair

2019

Abstract The duplication of the eukaryotic genome is an intricate process that has to be tightly safe‐guarded. One of the most frequently occurring errors during DNA synthesis is the mis‐insertion of a ribonucleotide instead of a deoxyribonucleotide. Ribonucleotide excision repair (RER) is initiated by RNase H2 and results in error‐free removal of such mis‐incorporated ribonucleotides. If left unrepaired, DNA‐embedded ribonucleotides result in a variety of alterations within chromosomal DNA, which ultimately lead to genome instability. Here, we review how genomic ribonucleotides lead to chromosomal aberrations and discuss how the tight regulation of RER timing may be important for preventin…

Genome instabilityRibonucleotideDNA RepairDNA repairDNA damageRibonucleotide excision repairRibonuclease HContext (language use)ReviewBiologyGenomic InstabilityGeneral Biochemistry Genetics and Molecular Biology570 Life sciences03 medical and health scienceschemistry.chemical_compound0302 clinical medicineAnimalsHumansMolecular Biology030304 developmental biology0303 health sciencesGeneral Immunology and MicrobiologyGeneral NeuroscienceRNA–DNA hybridDNA Replication Repair & RecombinationEukaryotaDNAtopoisomerase 1ChromatinChromatinCell biologychemistryribonucleotide excision repairGenetic FitnessRNase H2030217 neurology & neurosurgeryDNA570 BiowissenschaftenThe EMBO Journal
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Never cared for what they do. High structural stability of Guanine-quadruplexes in presence of strand-break damages

2021

AbstractDNA integrity is an important factor to assure genome stability and, more generally, cells and organisms’ viability. In presence of DNA damage, the normal cell cycle is perturbed while cells activate their repair processes. Although efficient, the repair system is not always able to ensure the complete restoration of gene integrity. In these cases, not only mutations may occur, but the accumulation of lesions can either lead to carcinogenesis or reach a threshold which induces apoptosis and the programmed cell death. Among the different types of DNA lesions, strand breaks produced by ionizing radiations are the most toxic, due to their inherently difficult repair, which may lead to …

Genome instabilitySenescenceProgrammed cell deathchemistry.chemical_compoundchemistryDNA damageGene expressionmedicineCarcinogenesismedicine.disease_causeGeneDNACell biology
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Characterization of a fractured basement reservoir using high-resolution 3D seismic and logging datasets: A case study of the Sab'atayn Basin, Yemen.

2018

The Sab'atayn Basin is one of the most prolific Mesozoic hydrocarbon basins located in central Yemen. It has many oil producing fields including the Habban Field with oil occurrences in fractured basement rocks. A comprehensive seismic analysis of fractured basement reservoirs was performed to identify the structural pattern and mechanism of hydrocarbon entrapment and reservoir characteristics. A 3D post-stack time migration seismic cube and logging data of 20 wells were used and several 2D seismic sections were constructed and interpreted. Depth structure maps were generated for the basement reservoir and overlying formations. The top of the basement reservoir is dissected by a set of NW-S…

Geologic SedimentsYemen010504 meteorology & atmospheric sciencesOutcropWater WellsDatasets as TopicGeographic Mappinglcsh:Medicine010502 geochemistry & geophysicsBiochemistry01 natural scienceschemistry.chemical_compoundJurassic PeriodOil and Gas FieldsPetrologylcsh:ScienceMaterialsSeismologyMineralsCretaceous PeriodMultidisciplinaryHydraulic FrackingPhysicsClassical MechanicsGeologyMineralogyLipidsPetroleum reservoirChemistryGeophysicsPetroleumBasement (geology)Source rockPhysical SciencesMesozoic EraPetroleumOrganic MaterialsPorosityGeologyResearch ArticleMaterials ScienceGraniteNatural GasStructural basinImaging Three-DimensionalEarthquakesHumans0105 earth and related environmental sciencesDamage Mechanicslcsh:RChemical CompoundsBiology and Life SciencesDrillingGeologic TimeHydrocarbonschemistryEarth SciencesGeographic Information Systemslcsh:QOilsOil shalePLoS ONE
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Understanding ageing: Biomedical and bioengineering approaches, the immunologic view

2008

Abstract During the past century, humans have gained more years of average life expectancy than in the last 10,000 years; we are now living in a rapidly ageing world. The sharp rise in life expectancy, coupled to a steady decline in birth rates in all developed countries, has led to an unprecedented demographic revolution characterized by an explosive growth in the number and proportion of older people. Ageing is a complex process that negatively impacts the development of the immune system and its ability to function. Progressive changes in the T and B cell systems over the life span have a major impact on the capacity to respond to immune challenge. These cumulative age-associated changes…

Gerontologylcsh:Immunologic diseases. AllergySettore MED/04 - Patologia GeneraleAgingbusiness.industryMitochondrial damage immunology TelomeresImmunologyShort ReportImmunosenescencelcsh:GeriatricsBirth rateSharp riseAgeinglcsh:RC952-954.6AgeingElderly populationLife expectancyMedicinebusinessOlder peoplelcsh:RC581-607Developed country
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Effect of hypoosmotic stress by low salinity acclimation of Mediterranean mussels Mytilus galloprovincialis on biological parameters used for polluti…

2008

In the present study, we investigated the progressive acclimation of the mussel Mytilus galloprovincialis to different reduced seawater (SW) salinities and its effect on several biochemical markers and biotests. Mussels were purchased from a local mariculture facility during summer (SW temperature 27 degrees C, salinity 37.5 psu) and winter (13 degrees C, 37 psu) seasons, and transferred to the laboratory for acclimation to reduced SW salinities (37, 28, 18.5 and 11 psu). At the beginning and at the end of acclimation processes tests of mussel survival in air were provided. After 14 days of acclimation the DNA integrity, p38-MAPK activation, metallothionein induction, oxygen consumption rat…

GillGillsSalinityanimal structuresHealth Toxicology and MutagenesisMuscle ProteinsAquatic ScienceAcclimatizationp38 Mitogen-Activated Protein KinasesCondition indexAnimal scienceOxygen ConsumptionOsmotic PressureAnimalsMaricultureFluorometrySeawaterPhosphorylationMytilusPrincipal Component AnalysisbiologyEcologyfungiMusselMytilus galloprovincialis; biomarkers; salinity; temperature; environmental condition variations; hypoosmotic stressbiology.organism_classificationBivalviaMytilusSalinityElectrophoresis Polyacrylamide GelMetallothioneinSeasonsDNA DamageEnvironmental Monitoring
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Jellyfish Stings Trigger Gill Disorders and Increased Mortality in Farmed Sparus aurata (Linnaeus, 1758) in the Mediterranean Sea

2016

11 pages, 4 figures

Gills0106 biological sciences0301 basic medicineGillFish mortalityFish DiseaseJellyfishScyphozoaRespiratory SystemMarine and Aquatic Scienceslcsh:MedicineAquaculture01 natural sciencesCell FusionBites and StingFish DiseasesAquacultureOceansMedicine and Health SciencesMarine FishBites and StingsAnimal Anatomylcsh:ScienceMultidisciplinarybiologyPhysicsFishesClassical MechanicsAgricultureSurvival RateVertebratesPhysical SciencesAnatomyAnimals Aquaculture Bites and Stings Fish Diseases Gills Mediterranean Sea Scyphozoa Sea Bream Survival Rate TunisiaResearch ArticleSettore BIO/07 - EcologiaCell PhysiologyTunisiaFish BiologyFish farmingMarine BiologyCnidaria03 medical and health sciencesFish physiologyBodies of waterbiology.animalFish PhysiologyMediterranean SeaAnimalsAnimal Physiology14. Life underwaterDamage MechanicsAnimalbusiness.industry010604 marine biology & hydrobiologylcsh:ROrganismsBiology and Life SciencesCell BiologyScyphozoabiology.organism_classificationPelagia noctilucaInvertebratesVertebrate PhysiologySea BreamFishery030104 developmental biologyAquatic Respiratory Anatomy13. Climate actionEarth SciencesGilllcsh:QJellyfishbusinessZoologyPLOS ONE
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Induction of apoptosis in the blue mussel Mytilus galloprovincialis by tri-n-butyltin chloride

2001

Induction of apoptosis by tri-n-butyltin (TBT) in gill tissue of the mussel Mytilus galloprovincialis was investigated. The terminal dUTP nick-end labeling technique (TUNEL) was used to detect cells displaying DNA fragmentation within gill structures. Genomic DNA fragmentation was detected as characteristically ladder-like pattern of DNA fragments induced by single injection of different doses of TBT (1-5 microg/g) below the mantle, directly into the pallial fluid, after 24 h of incubation. DNA degradation of higher order DNA structure, as well as reduced G(0)/G(1) cell cycle region (the sub-G(1) region) was detectable after 1.5 h of TBT incubation. Presence of apoptotic cells in mussels' g…

GillsGillanimal structuresDNA damageHealth Toxicology and MutagenesisApoptosisDNA FragmentationAquatic ScienceBiologychemistry.chemical_compoundIn Situ Nick-End LabelingAnimalsTUNEL assayCell CyclefungiMusselAnatomyFlow Cytometrybiology.organism_classificationImmunohistochemistryMolecular biologyMytilusBivalviaElectrophoresis Gel Pulsed-FieldchemistryTributyltinDNA damage; apoptosis; tributyltin; musselDNA fragmentationTrialkyltin CompoundsWater Pollutants ChemicalBlue musselAquatic Toxicology
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DNA damage and apoptosis in the mussel Mytilus galloprovincialis

2002

The effects of known genotoxic substances (4-nitroquinoline-N-oxide, benzo[a]pyrene, teniposide, etoposide, cycloheximide, tributyltin) on human cells (FLC, HL-60) and on mussels were investigated. The correlations between formation of DNA strand breaks and DNA fragmentation characteristic for the process of apoptosis were estimated. Strand breaks induced by 4-nitroquinoline-N-oxide and benzo[a]pyrene did not correlate with DNA fragmentation detected in the process of apoptosis. Induction of internucleosomal DNA fragmentation in HL-60 cells was initiated by teniposide, etoposide and tributyltin, while in the gills of mussels this was detected only with tributyltin. Levels of DNA strand brea…

Gillsanimal structuresDNA damageCell Culture TechniquesIndustrial WasteApoptosisAquatic ScienceOceanographymedicine.disease_causechemistry.chemical_compoundmedicineAnimalsHumansbiologyEcologyGeneral Medicinebiology.organism_classificationPollutionMolecular biologyMytilusBivalviachemistryBenzo(a)pyreneApoptosisTributyltinDNA fragmentationWater Pollutants ChemicalDNAGenotoxicityDNA DamageMarine Environmental Research
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Glial Protection Against Neuronal Damage

1997

Glial homeostatic mechanisms are involved in neuronal protection during the early phase of cerebral ischemia. These protective effects include, among others, glutamate uptake and the regulation of pH in the extracellular space of the brain. Uptake of glutamate goes along with glial swelling, as does the elimination of protons from the glial cytosol. Five transport systems interact in order to maintain a normal intra- and extracellular pH in the brain.

Glutamate uptakeCytosolnervous systemChemistryNeuronal damageIschemiamedicineGlutamate receptorExtracellularNeuronal protectionmedicine.diseaseHomeostasisCell biology
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